Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16a19
(397 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 28 0.034
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 28 0.034
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 28 0.034
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 2.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 2.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 2.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 3.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 5.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 9.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 9.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 9.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 9.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 20 9.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 20 9.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 20 9.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 20 9.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 20 9.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 20 9.0
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 20 9.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 20 9.0
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 28.3 bits (60), Expect = 0.034
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 145 SLTPRFNVLDTFRFILGSEILYSNLINLMMVRVVQPVFFMSFLIADKTISPVL---NVLF 315
SLT F VL T +LG+ ++ ++ +R+VQ F +S +AD ++ ++ NV +
Sbjct: 40 SLTLGFLVLAT---VLGNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAY 96
Query: 316 IL 321
+L
Sbjct: 97 LL 98
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 28.3 bits (60), Expect = 0.034
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 145 SLTPRFNVLDTFRFILGSEILYSNLINLMMVRVVQPVFFMSFLIADKTISPVL---NVLF 315
SLT F VL T +LG+ ++ ++ +R+VQ F +S +AD ++ ++ NV +
Sbjct: 40 SLTLGFLVLAT---VLGNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAY 96
Query: 316 IL 321
+L
Sbjct: 97 LL 98
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 28.3 bits (60), Expect = 0.034
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 145 SLTPRFNVLDTFRFILGSEILYSNLINLMMVRVVQPVFFMSFLIADKTISPVL---NVLF 315
SLT F VL T +LG+ ++ ++ +R+VQ F +S +AD ++ ++ NV +
Sbjct: 40 SLTLGFLVLAT---VLGNALVILSVFTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAY 96
Query: 316 IL 321
+L
Sbjct: 97 LL 98
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.8 bits (44), Expect = 2.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 188 INRKVSRTLKRGVRLGLLQMER 123
I+ ++SR L G+R GL +ER
Sbjct: 678 ISDRLSRDLYCGIRAGLSWLER 699
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 2.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 188 INRKVSRTLKRGVRLGLLQMER 123
I+ ++SR L G+R GL +ER
Sbjct: 716 ISDRLSRDLYCGIRAGLSWLER 737
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 2.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 205 LYSNLINLMMVRVVQPVFFMSF 270
LY N+IN+ + V PV+ +F
Sbjct: 336 LYYNIINIEQIPVPVPVYCGNF 357
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 3.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 205 LYSNLINLMMVRVVQPVFFMSF 270
LY N+IN+ + V P++ +F
Sbjct: 334 LYYNIINIEQIPVPVPIYCGNF 355
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.0 bits (42), Expect = 5.1
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +3
Query: 243 CPASVFHEFLDCRQND 290
CP +++ LDC Q +
Sbjct: 863 CPEAIYQLMLDCWQKE 878
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +2
Query: 113 YSGLVPFEASRA*HHVSMSWIP 178
YS +E A HH W+P
Sbjct: 124 YSNRSQYEFLNAIHHYDDIWLP 145
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +2
Query: 113 YSGLVPFEASRA*HHVSMSWIP 178
YS +E A HH W+P
Sbjct: 124 YSNRSQYEFLNAIHHYDDIWLP 145
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +2
Query: 113 YSGLVPFEASRA*HHVSMSWIP 178
YS +E A HH W+P
Sbjct: 175 YSNRSQYEFLNAIHHYDDIWLP 196
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +2
Query: 113 YSGLVPFEASRA*HHVSMSWIP 178
YS +E A HH W+P
Sbjct: 124 YSNRSQYEFLNAIHHYDDIWLP 145
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 199 EILYSNLINLMMVRVVQPVFFMSF 270
++ Y N+IN+ + V P++ +F
Sbjct: 107 KLQYYNIINIEQIPVPVPIYCGNF 130
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 199 EILYSNLINLMMVRVVQPVFFMSF 270
++ Y N+IN+ + V P++ +F
Sbjct: 107 KLQYYNIINIEQIPVPVPIYCGNF 130
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 199 EILYSNLINLMMVRVVQPVFFMSF 270
++ Y N+IN+ + V P++ +F
Sbjct: 107 KLQYYNIINIEQIPVPVPIYCGNF 130
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 199 EILYSNLINLMMVRVVQPVFFMSF 270
++ Y N+IN+ + V P++ +F
Sbjct: 107 KLQYYNIINIEQIPVPVPIYCGNF 130
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 199 EILYSNLINLMMVRVVQPVFFMSF 270
++ Y N+IN+ + V P++ +F
Sbjct: 107 KLQYYNIINIEQIPVPVPIYCGNF 130
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 199 EILYSNLINLMMVRVVQPVFFMSF 270
++ Y N+IN+ + V P++ +F
Sbjct: 107 KLQYYNIINIEQIPVPVPIYCGNF 130
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 199 EILYSNLINLMMVRVVQPVFFMSF 270
++ Y N+IN+ + V P++ +F
Sbjct: 111 KLQYYNIINIEQIPVPVPIYCGNF 134
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 199 EILYSNLINLMMVRVVQPVFFMSF 270
++ Y N+IN+ + V P++ +F
Sbjct: 107 KLQYYNIINIEQIPVPVPIYCGNF 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,709
Number of Sequences: 438
Number of extensions: 2215
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9761793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -