Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte16a13
(875 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075330-1|AAL68197.1| 867|Drosophila melanogaster GH11924p pro... 60 5e-09
AE013599-1633|AAF58426.1| 867|Drosophila melanogaster CG13326-P... 60 5e-09
U63736-1|AAB17547.1| 727|Drosophila melanogaster secreted axon ... 33 0.68
BT016113-1|AAV36998.1| 1193|Drosophila melanogaster LD10462p pro... 31 2.1
BT001511-1|AAN71266.1| 1193|Drosophila melanogaster LD43392p pro... 31 2.1
AE014297-2173|AAF55292.2| 1193|Drosophila melanogaster CG12785-P... 31 2.1
AY089368-1|AAL90106.1| 447|Drosophila melanogaster AT19096p pro... 31 2.8
AE014134-3272|AAF53915.2| 448|Drosophila melanogaster CG9316-PA... 31 2.8
AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA... 31 2.8
AY051898-1|AAK93322.1| 1232|Drosophila melanogaster LD38671p pro... 30 4.8
AE014297-4146|AAF56723.1| 1284|Drosophila melanogaster CG5634-PA... 30 4.8
BT028801-1|ABI34182.1| 286|Drosophila melanogaster LP21747p pro... 29 6.4
BT004476-1|AAO42640.1| 286|Drosophila melanogaster LP07342p pro... 29 6.4
AJ271041-1|CAB66004.1| 286|Drosophila melanogaster Gly-rich pro... 29 6.4
AE014297-4048|AAF56656.1| 286|Drosophila melanogaster CG5812-PA... 29 6.4
BT001887-1|AAN71661.1| 664|Drosophila melanogaster SD14914p pro... 29 8.4
AE014297-1929|AAF55125.1| 662|Drosophila melanogaster CG6966-PA... 29 8.4
AE014134-695|AAF51047.1| 107|Drosophila melanogaster CG15423-PA... 29 8.4
>AY075330-1|AAL68197.1| 867|Drosophila melanogaster GH11924p protein.
Length = 867
Score = 59.7 bits (138), Expect = 5e-09
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Frame = -1
Query: 524 SLKQRAQLLAEFVVQQMS------GLTQERDCSMPSVELHLADLMTELKSPXXXXXXXXX 363
++ +R++L+A+ V MS L +C +V HL +L L +
Sbjct: 717 NVAKRSKLIAQAVNAVMSENLKILDLNSTEECCRNTVRCHLQELRHVLHTNFIPLGMVRS 776
Query: 362 XGPLERAVLYKVLSDRVGLPCALKRVAS--HAWCEVAL---PEMDSDNEETEVSY-PAGL 201
ERA+L+K L+D++GLPC L+R + E+ L PE D ++ + Y P +
Sbjct: 777 GCQFERAILFKGLADQIGLPCTLQRSVDGRMLYNELPLPLEPEKDVHCDKKTLKYMPWRM 836
Query: 200 LRCNYVVDLVSHPGRLWPLDSLEA 129
LR +VVDL+ + G L+P+ S +A
Sbjct: 837 LRPTHVVDLLYNVGELYPMQSRQA 860
>AE013599-1633|AAF58426.1| 867|Drosophila melanogaster CG13326-PA
protein.
Length = 867
Score = 59.7 bits (138), Expect = 5e-09
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Frame = -1
Query: 524 SLKQRAQLLAEFVVQQMS------GLTQERDCSMPSVELHLADLMTELKSPXXXXXXXXX 363
++ +R++L+A+ V MS L +C +V HL +L L +
Sbjct: 717 NVAKRSKLIAQAVNAVMSENLKILDLNSTEECCRNTVRCHLQELRHVLHTNFIPLGMVRS 776
Query: 362 XGPLERAVLYKVLSDRVGLPCALKRVAS--HAWCEVAL---PEMDSDNEETEVSY-PAGL 201
ERA+L+K L+D++GLPC L+R + E+ L PE D ++ + Y P +
Sbjct: 777 GCQFERAILFKGLADQIGLPCTLQRSVDGRMLYNELPLPLEPEKDVHCDKKTLKYMPWRM 836
Query: 200 LRCNYVVDLVSHPGRLWPLDSLEA 129
LR +VVDL+ + G L+P+ S +A
Sbjct: 837 LRPTHVVDLLYNVGELYPMQSRQA 860
>U63736-1|AAB17547.1| 727|Drosophila melanogaster secreted axon
guidance molecule protein.
Length = 727
Score = 32.7 bits (71), Expect = 0.68
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 122 PDALPTSPGATADRDATPNPPRSYSAADLQGSSLRSPHCRNPFRVRRLHTTRAMRR 289
PDA +SPG+ DR+A P P S S + + ++ CR +RL+ + +R
Sbjct: 499 PDAPESSPGSGGDRNAPPEWPPSLSTIAPRAAGVKCGKCR--VSTKRLNLNKFCKR 552
>BT016113-1|AAV36998.1| 1193|Drosophila melanogaster LD10462p protein.
Length = 1193
Score = 31.1 bits (67), Expect = 2.1
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 281 SHAWCEVALPEMDSDNEETEVSYPAGLLRCNYVVDLVSHPGRLWPLDSLEAHRVRGTI 108
+++W E + +++ + SYP + +Y D+ H GRLW D + RV G +
Sbjct: 919 NNSWQEQQIADLEHNYRSNRQSYPPLAVATSY--DM-QHAGRLWTSDQSPSQRVLGHV 973
>BT001511-1|AAN71266.1| 1193|Drosophila melanogaster LD43392p protein.
Length = 1193
Score = 31.1 bits (67), Expect = 2.1
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 281 SHAWCEVALPEMDSDNEETEVSYPAGLLRCNYVVDLVSHPGRLWPLDSLEAHRVRGTI 108
+++W E + +++ + SYP + +Y D+ H GRLW D + RV G +
Sbjct: 919 NNSWQEQQIADLEHNYRSNRQSYPPLAVATSY--DM-QHAGRLWTSDQSPSQRVLGHV 973
>AE014297-2173|AAF55292.2| 1193|Drosophila melanogaster CG12785-PA
protein.
Length = 1193
Score = 31.1 bits (67), Expect = 2.1
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 281 SHAWCEVALPEMDSDNEETEVSYPAGLLRCNYVVDLVSHPGRLWPLDSLEAHRVRGTI 108
+++W E + +++ + SYP + +Y D+ H GRLW D + RV G +
Sbjct: 919 NNSWQEQQIADLEHNYRSNRQSYPPLAVATSY--DM-QHAGRLWTSDQSPSQRVLGHV 973
>AY089368-1|AAL90106.1| 447|Drosophila melanogaster AT19096p
protein.
Length = 447
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 650 LRSYLLKLRLWFGDPAKSLHYIEIEDAHYEVRYRDKCAEVSSSLKQRAQLL 498
LR LL + FG P KSLH ++++D +EV +++ S +L+
Sbjct: 211 LRDCLLWNSMEFGIPLKSLHTLDLDDCCFEVMNVSLYQKIAESCTNLVELI 261
>AE014134-3272|AAF53915.2| 448|Drosophila melanogaster CG9316-PA
protein.
Length = 448
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 650 LRSYLLKLRLWFGDPAKSLHYIEIEDAHYEVRYRDKCAEVSSSLKQRAQLL 498
LR LL + FG P KSLH ++++D +EV +++ S +L+
Sbjct: 213 LRDCLLWNSMEFGIPLKSLHTLDLDDCCFEVMNVSLYQKIAESCTNLVELI 263
>AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA
protein.
Length = 1998
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -2
Query: 832 RGVAAEASASGSCAHRHVSSTLSRTEIPQWTYGCLISGRVP 710
R A S G+ + H + S+ P W Y C GR+P
Sbjct: 1914 RDAAGGNSNGGAAYYNHNAHAHSQAHHPNWQYSCQDQGRIP 1954
>AY051898-1|AAK93322.1| 1232|Drosophila melanogaster LD38671p
protein.
Length = 1232
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 243 IHFG*GDFTPRVRCDALQSARQPHAIRQH 329
IH G G+++ V+C L AR PH R+H
Sbjct: 8 IHDGWGNYSVSVKCSWLIDARHPHWNRRH 36
>AE014297-4146|AAF56723.1| 1284|Drosophila melanogaster CG5634-PA
protein.
Length = 1284
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 243 IHFG*GDFTPRVRCDALQSARQPHAIRQH 329
IH G G+++ V+C L AR PH R+H
Sbjct: 99 IHDGWGNYSVSVKCSWLIDARHPHWNRRH 127
>BT028801-1|ABI34182.1| 286|Drosophila melanogaster LP21747p
protein.
Length = 286
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 758 RPTEGGGNMAMSTGSRGGGFCSNTSWMVGNRLGESF 865
RP GGG+ S G GGGF +S G +G F
Sbjct: 25 RPGGGGGSGGGSGGGLGGGFGGGSSGGFGGGIGGGF 60
>BT004476-1|AAO42640.1| 286|Drosophila melanogaster LP07342p
protein.
Length = 286
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 758 RPTEGGGNMAMSTGSRGGGFCSNTSWMVGNRLGESF 865
RP GGG+ S G GGGF +S G +G F
Sbjct: 25 RPGGGGGSGGGSGGGLGGGFGGGSSGGFGGGIGGGF 60
>AJ271041-1|CAB66004.1| 286|Drosophila melanogaster Gly-rich
protein protein.
Length = 286
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 758 RPTEGGGNMAMSTGSRGGGFCSNTSWMVGNRLGESF 865
RP GGG+ S G GGGF +S G +G F
Sbjct: 25 RPGGGGGSGGGSGGGLGGGFGGGSSGGFGGGIGGGF 60
>AE014297-4048|AAF56656.1| 286|Drosophila melanogaster CG5812-PA
protein.
Length = 286
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 758 RPTEGGGNMAMSTGSRGGGFCSNTSWMVGNRLGESF 865
RP GGG+ S G GGGF +S G +G F
Sbjct: 25 RPGGGGGSGGGSGGGLGGGFGGGSSGGFGGGIGGGF 60
>BT001887-1|AAN71661.1| 664|Drosophila melanogaster SD14914p
protein.
Length = 664
Score = 29.1 bits (62), Expect = 8.4
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -1
Query: 665 PDDVNLRSYLLKLRLWFGDPAKSLHYIEIEDAHYEVRYR-DKCAEVSSSLKQRAQLLAEF 489
PD++ +++ +++ R+ + +YI AHY R D+C E+ S A + +
Sbjct: 312 PDEMRMQALVIRQRILGPTHPDTSYYIRFRGAHYADAGRFDRCIELWS----YALTMQQK 367
Query: 488 VVQQMSGLTQ 459
++Q +S +TQ
Sbjct: 368 ILQPLSPMTQ 377
>AE014297-1929|AAF55125.1| 662|Drosophila melanogaster CG6966-PA
protein.
Length = 662
Score = 29.1 bits (62), Expect = 8.4
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -1
Query: 665 PDDVNLRSYLLKLRLWFGDPAKSLHYIEIEDAHYEVRYR-DKCAEVSSSLKQRAQLLAEF 489
PD++ +++ +++ R+ + +YI AHY R D+C E+ S A + +
Sbjct: 310 PDEMRMQALVIRQRILGPTHPDTSYYIRFRGAHYADAGRFDRCIELWS----YALTMQQK 365
Query: 488 VVQQMSGLTQ 459
++Q +S +TQ
Sbjct: 366 ILQPLSPMTQ 375
>AE014134-695|AAF51047.1| 107|Drosophila melanogaster CG15423-PA
protein.
Length = 107
Score = 29.1 bits (62), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 855 PKRFPTIQ-EVLLQKPPPRDPVLIAMFPPP 769
P R P I+ + ++PPPR+ V+I PPP
Sbjct: 75 PPRAPFIEFNIGGRRPPPREEVIIVQQPPP 104
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,871,104
Number of Sequences: 53049
Number of extensions: 906960
Number of successful extensions: 3891
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3856
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -