Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte16a09
         (891 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    28   0.33 
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    28   0.44 
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    27   0.77 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.1  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 0.33
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 233 PSSPNQSLAMKGSTCKLTHRHSPLSFSSDPLSGSRVRSG 349
           PS+PNQ +  K  T  L  +  P +F + P S SR+ +G
Sbjct: 190 PSAPNQQIIYKEQTANLQVQKVP-AFQAMPESVSRISTG 227


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 0.44
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -3

Query: 580 SKGWRIHDPPNTEWN-LRHR 524
           SKGW+IH     EWN + HR
Sbjct: 153 SKGWKIHSVRVAEWNFMNHR 172


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 27.1 bits (57), Expect = 0.77
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 48  KTFNIKLNILRFTFPFKTFLFVYFAI 125
           KTF+I  +IL+F  PF    F Y  +
Sbjct: 266 KTFSIVTSILQFVLPFIIMAFCYICV 291


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +1

Query: 364 STALARASVSNVLRLELRELTYS---PGESSMPPEVTRTG 474
           ST+LA A  S   R   R+ T S   PG+S  PP+ TR G
Sbjct: 104 STSLAVAGGSE--RRVQRDATSSGGRPGQSGSPPDPTRNG 141


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,760
Number of Sequences: 2352
Number of extensions: 16902
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)