Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15p17
(819 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5... 197 3e-50
U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein. 197 3e-50
BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5 p... 197 3e-50
BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein. 197 3e-50
BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein. 197 3e-50
BC000947-1|AAH00947.1| 310|Homo sapiens RANBP5 protein protein. 197 3e-50
AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5 p... 197 3e-50
AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5 p... 197 3e-50
BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein pr... 184 3e-46
BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6 p... 184 3e-46
BC012805-1|AAH12805.2| 414|Homo sapiens RANBP6 protein protein. 184 3e-46
AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6 p... 184 3e-46
AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein... 184 3e-46
AK074743-1|BAC11174.1| 525|Homo sapiens protein ( Homo sapiens ... 48 5e-05
CR457367-1|CAG33648.1| 757|Homo sapiens IPO4 protein. 47 7e-05
BC110804-1|AAI10805.1| 1081|Homo sapiens importin 4 protein. 47 7e-05
BC003690-1|AAH03690.2| 787|Homo sapiens IPO4 protein protein. 47 7e-05
AK027871-1|BAB55421.1| 434|Homo sapiens protein ( Homo sapiens ... 47 7e-05
AK026991-1|BAB15616.1| 757|Homo sapiens protein ( Homo sapiens ... 47 7e-05
AF411122-1|AAL78660.1| 1081|Homo sapiens importin 4 protein. 47 7e-05
AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant prot... 47 7e-05
AB208897-1|BAD92134.1| 758|Homo sapiens IPO4 protein variant pr... 47 7e-05
BC008863-1|AAH08863.1| 346|Homo sapiens polymerase (RNA) I poly... 34 0.54
BC008118-1|AAH08118.1| 338|Homo sapiens POLR1C protein protein. 34 0.54
AL355802-13|CAI42630.1| 139|Homo sapiens RP3-337H4.4 protein. 34 0.54
AL355802-12|CAI42629.1| 346|Homo sapiens RP3-337H4.4 protein. 34 0.54
AL355802-11|CAI42628.1| 314|Homo sapiens RP3-337H4.4 protein. 34 0.54
AF008442-1|AAC14354.1| 346|Homo sapiens RNA polymerase I subuni... 34 0.54
AK129921-1|BAC85250.1| 219|Homo sapiens or (EC 1.10.2.2). prot... 31 3.8
>Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5
protein.
Length = 1097
Score = 197 bits (481), Expect = 3e-50
Identities = 90/233 (38%), Positives = 144/233 (61%), Gaps = 2/233 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ P+RP+ DRQW +CIFDD+IE PA KY + FL PML + ++ PEVRQ
Sbjct: 864 LLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCDNSPEVRQ 923
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQ+G + ++ D+++ E +NATEN ISAV KI+K+
Sbjct: 924 AAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFK 983
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+N +E++ HWL+WLP+ ED EEA + LC+L S H + P+ ++ + +A
Sbjct: 984 PDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPKIFSIIA 1043
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALST 125
E +A+ +++P ++ ++RQ+Q++ L+ C+ LS + + A+Q L++
Sbjct: 1044 EGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein.
Length = 1097
Score = 197 bits (481), Expect = 3e-50
Identities = 90/233 (38%), Positives = 144/233 (61%), Gaps = 2/233 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ P+RP+ DRQW +CIFDD+IE PA KY + FL PML + ++ PEVRQ
Sbjct: 864 LLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCDNSPEVRQ 923
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQ+G + ++ D+++ E +NATEN ISAV KI+K+
Sbjct: 924 AAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFK 983
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+N +E++ HWL+WLP+ ED EEA + LC+L S H + P+ ++ + +A
Sbjct: 984 PDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPKIFSIIA 1043
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALST 125
E +A+ +++P ++ ++RQ+Q++ L+ C+ LS + + A+Q L++
Sbjct: 1044 EGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5
protein.
Length = 1115
Score = 197 bits (481), Expect = 3e-50
Identities = 90/233 (38%), Positives = 144/233 (61%), Gaps = 2/233 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ P+RP+ DRQW +CIFDD+IE PA KY + FL PML + ++ PEVRQ
Sbjct: 882 LLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCDNSPEVRQ 941
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQ+G + ++ D+++ E +NATEN ISAV KI+K+
Sbjct: 942 AAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFK 1001
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+N +E++ HWL+WLP+ ED EEA + LC+L S H + P+ ++ + +A
Sbjct: 1002 PDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPKIFSIIA 1061
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALST 125
E +A+ +++P ++ ++RQ+Q++ L+ C+ LS + + A+Q L++
Sbjct: 1062 EGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1114
>BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 197 bits (481), Expect = 3e-50
Identities = 90/233 (38%), Positives = 144/233 (61%), Gaps = 2/233 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ P+RP+ DRQW +CIFDD+IE PA KY + FL PML + ++ PEVRQ
Sbjct: 864 LLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCDNSPEVRQ 923
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQ+G + ++ D+++ E +NATEN ISAV KI+K+
Sbjct: 924 AAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFK 983
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+N +E++ HWL+WLP+ ED EEA + LC+L S H + P+ ++ + +A
Sbjct: 984 PDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPKIFSIIA 1043
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALST 125
E +A+ +++P ++ ++RQ+Q++ L+ C+ LS + + A+Q L++
Sbjct: 1044 EGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 197 bits (481), Expect = 3e-50
Identities = 90/233 (38%), Positives = 144/233 (61%), Gaps = 2/233 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ P+RP+ DRQW +CIFDD+IE PA KY + FL PML + ++ PEVRQ
Sbjct: 864 LLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCDNSPEVRQ 923
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQ+G + ++ D+++ E +NATEN ISAV KI+K+
Sbjct: 924 AAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFK 983
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+N +E++ HWL+WLP+ ED EEA + LC+L S H + P+ ++ + +A
Sbjct: 984 PDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPKIFSIIA 1043
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALST 125
E +A+ +++P ++ ++RQ+Q++ L+ C+ LS + + A+Q L++
Sbjct: 1044 EGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>BC000947-1|AAH00947.1| 310|Homo sapiens RANBP5 protein protein.
Length = 310
Score = 197 bits (481), Expect = 3e-50
Identities = 90/233 (38%), Positives = 144/233 (61%), Gaps = 2/233 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ P+RP+ DRQW +CIFDD+IE PA KY + FL PML + ++ PEVRQ
Sbjct: 77 LLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCDNSPEVRQ 136
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQ+G + ++ D+++ E +NATEN ISAV KI+K+
Sbjct: 137 AAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFK 196
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+N +E++ HWL+WLP+ ED EEA + LC+L S H + P+ ++ + +A
Sbjct: 197 PDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPKIFSIIA 256
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALST 125
E +A+ +++P ++ ++RQ+Q++ L+ C+ LS + + A+Q L++
Sbjct: 257 EGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 309
>AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 197 bits (481), Expect = 3e-50
Identities = 90/233 (38%), Positives = 144/233 (61%), Gaps = 2/233 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ P+RP+ DRQW +CIFDD+IE PA KY + FL PML + ++ PEVRQ
Sbjct: 864 LLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCDNSPEVRQ 923
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQ+G + ++ D+++ E +NATEN ISAV KI+K+
Sbjct: 924 AAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFK 983
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+N +E++ HWL+WLP+ ED EEA + LC+L S H + P+ ++ + +A
Sbjct: 984 PDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPKIFSIIA 1043
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALST 125
E +A+ +++P ++ ++RQ+Q++ L+ C+ LS + + A+Q L++
Sbjct: 1044 EGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 197 bits (481), Expect = 3e-50
Identities = 90/233 (38%), Positives = 144/233 (61%), Gaps = 2/233 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ P+RP+ DRQW +CIFDD+IE PA KY + FL PML + ++ PEVRQ
Sbjct: 864 LLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCDNSPEVRQ 923
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQ+G + ++ D+++ E +NATEN ISAV KI+K+
Sbjct: 924 AAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFK 983
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+N +E++ HWL+WLP+ ED EEA + LC+L S H + P+ ++ + +A
Sbjct: 984 PDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPKIFSIIA 1043
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALST 125
E +A+ +++P ++ ++RQ+Q++ L+ C+ LS + + A+Q L++
Sbjct: 1044 EGEMHEAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein
protein.
Length = 1109
Score = 184 bits (449), Expect = 3e-46
Identities = 87/232 (37%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ +RP+ DRQW +CIFDDIIE P KY + F PML +R++ PEVRQ
Sbjct: 876 LLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQ 935
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQFG + ++ ++++ + + ATEN ISA+ KI+K+
Sbjct: 936 AAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFK 995
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+ +N DE++ HWL+WLP+ ED EEA + LC+L S H + P+ ++++ +A
Sbjct: 996 PNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPKIISIIA 1055
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALS 128
E + + ++P ++ ++RQ+Q++ +L+ C+ L ++ +EALQ L+
Sbjct: 1056 EGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1107
>BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 184 bits (449), Expect = 3e-46
Identities = 87/232 (37%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ +RP+ DRQW +CIFDDIIE P KY + F PML +R++ PEVRQ
Sbjct: 872 LLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQ 931
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQFG + ++ ++++ + + ATEN ISA+ KI+K+
Sbjct: 932 AAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFK 991
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+ +N DE++ HWL+WLP+ ED EEA + LC+L S H + P+ ++++ +A
Sbjct: 992 PNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPKIISIIA 1051
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALS 128
E + + ++P ++ ++RQ+Q++ +L+ C+ L ++ +EALQ L+
Sbjct: 1052 EGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1103
>BC012805-1|AAH12805.2| 414|Homo sapiens RANBP6 protein protein.
Length = 414
Score = 184 bits (449), Expect = 3e-46
Identities = 87/232 (37%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ +RP+ DRQW +CIFDDIIE P KY + F PML +R++ PEVRQ
Sbjct: 181 LLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQ 240
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQFG + ++ ++++ + + ATEN ISA+ KI+K+
Sbjct: 241 AAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFK 300
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+ +N DE++ HWL+WLP+ ED EEA + LC+L S H + P+ ++++ +A
Sbjct: 301 PNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPKIISIIA 360
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALS 128
E + + ++P ++ ++RQ+Q++ +L+ C+ L ++ +EALQ L+
Sbjct: 361 EGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 412
>AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 184 bits (449), Expect = 3e-46
Identities = 87/232 (37%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ +RP+ DRQW +CIFDDIIE P KY + F PML +R++ PEVRQ
Sbjct: 872 LLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQ 931
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQFG + ++ ++++ + + ATEN ISA+ KI+K+
Sbjct: 932 AAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFK 991
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+ +N DE++ HWL+WLP+ ED EEA + LC+L S H + P+ ++++ +A
Sbjct: 992 PNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPKIISIIA 1051
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALS 128
E + + ++P ++ ++RQ+Q++ +L+ C+ L ++ +EALQ L+
Sbjct: 1052 EGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1103
>AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein
protein.
Length = 1105
Score = 184 bits (449), Expect = 3e-46
Identities = 87/232 (37%), Positives = 142/232 (61%), Gaps = 2/232 (0%)
Frame = -3
Query: 817 LLPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQ 638
LLP +V L+ +RP+ DRQW +CIFDDIIE P KY + F PML +R++ PEVRQ
Sbjct: 872 LLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQ 931
Query: 637 AAAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYN 458
AAAYG GV+AQFG + ++ ++++ + + ATEN ISA+ KI+K+
Sbjct: 932 AAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFK 991
Query: 457 HSQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQ--RVLATLA 284
+ +N DE++ HWL+WLP+ ED EEA + LC+L S H + P+ ++++ +A
Sbjct: 992 PNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPKIISIIA 1051
Query: 283 EAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIALS 128
E + + ++P ++ ++RQ+Q++ +L+ C+ L ++ +EALQ L+
Sbjct: 1052 EGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1103
>AK074743-1|BAC11174.1| 525|Homo sapiens protein ( Homo sapiens
cDNA FLJ90262 fis, clone NT2RM4000965, weakly similar to
PUTATIVE IMPORTIN BETA-4 SUBUNIT. ).
Length = 525
Score = 47.6 bits (108), Expect = 5e-05
Identities = 49/229 (21%), Positives = 94/229 (41%), Gaps = 1/229 (0%)
Frame = -3
Query: 814 LPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQA 635
LP LV +++ +A+ + I+ G A ++ L +L+ +E++PEVR
Sbjct: 301 LPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQEADPEVRSN 360
Query: 634 AAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYNH 455
A +G GVLA+ G ++A +N A+A+++ +
Sbjct: 361 AIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLARE-----RHDRVRDNICGALARLLMASP 415
Query: 454 SQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQRVLATLAEAF 275
++ +++ L LP+ ED EE + L L S + D +L +
Sbjct: 416 TRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVI--DVAPELLRICSLIL 473
Query: 274 RADAVPNDNPVYAQMVALLRQI-QSNAELFNSCLMTLSNDHKEALQIAL 131
+ +P A ++ LL + + + + F + L +L D + LQ L
Sbjct: 474 ADNKIPPGEDTKAALLLLLTFLAKQHTDSFQAALGSLPVDKAQELQAVL 522
>CR457367-1|CAG33648.1| 757|Homo sapiens IPO4 protein.
Length = 757
Score = 47.2 bits (107), Expect = 7e-05
Identities = 49/228 (21%), Positives = 93/228 (40%)
Frame = -3
Query: 814 LPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQA 635
LP LV +++ +A+ + I+ G A ++ L +L+ +E++PEVR
Sbjct: 535 LPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQEADPEVRSN 594
Query: 634 AAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYNH 455
A +G GVLA+ G ++A +N A+A+++ +
Sbjct: 595 AIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLARE-----RHDRVRDNICGALARLLMASP 649
Query: 454 SQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQRVLATLAEAF 275
++ +++ L LP+ ED EE + L L S + D +L +
Sbjct: 650 TRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVI--DVAPELLRICSLIL 707
Query: 274 RADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIAL 131
+ +P D A ++ L + + + F + L +L D + LQ L
Sbjct: 708 ADNKIPPDTKA-ALLLLLTFLAKQHTDSFQAALGSLPVDKAQELQAVL 754
>BC110804-1|AAI10805.1| 1081|Homo sapiens importin 4 protein.
Length = 1081
Score = 47.2 bits (107), Expect = 7e-05
Identities = 49/228 (21%), Positives = 93/228 (40%)
Frame = -3
Query: 814 LPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQA 635
LP LV +++ +A+ + I+ G A ++ L +L+ +E++PEVR
Sbjct: 859 LPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQEADPEVRSN 918
Query: 634 AAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYNH 455
A +G GVLA+ G ++A +N A+A+++ +
Sbjct: 919 AIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLARE-----RHDRVRDNICGALARLLMASP 973
Query: 454 SQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQRVLATLAEAF 275
++ +++ L LP+ ED EE + L L S + D +L +
Sbjct: 974 TRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVI--DVAPELLRICSLIL 1031
Query: 274 RADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIAL 131
+ +P D A ++ L + + + F + L +L D + LQ L
Sbjct: 1032 ADNKIPPDTKA-ALLLLLTFLAKQHTDSFQAALGSLPVDKAQELQAVL 1078
>BC003690-1|AAH03690.2| 787|Homo sapiens IPO4 protein protein.
Length = 787
Score = 47.2 bits (107), Expect = 7e-05
Identities = 49/228 (21%), Positives = 93/228 (40%)
Frame = -3
Query: 814 LPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQA 635
LP LV +++ +A+ + I+ G A ++ L +L+ +E++PEVR
Sbjct: 565 LPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQEADPEVRSN 624
Query: 634 AAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYNH 455
A +G GVLA+ G ++A +N A+A+++ +
Sbjct: 625 AIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLARE-----RHDRVRDNICGALARLLMASP 679
Query: 454 SQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQRVLATLAEAF 275
++ +++ L LP+ ED EE + L L S + D +L +
Sbjct: 680 TRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVI--DVAPELLRICSLIL 737
Query: 274 RADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIAL 131
+ +P D A ++ L + + + F + L +L D + LQ L
Sbjct: 738 ADNKIPPDTKA-ALLLLLTFLAKQHTDSFQAALGSLPVDKAQELQAVL 784
>AK027871-1|BAB55421.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14965 fis, clone SKNMC1000011, weakly similar to
PUTATIVE IMPORTIN BETA-4 SUBUNIT. ).
Length = 434
Score = 47.2 bits (107), Expect = 7e-05
Identities = 49/228 (21%), Positives = 93/228 (40%)
Frame = -3
Query: 814 LPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQA 635
LP LV +++ +A+ + I+ G A ++ L +L+ +E++PEVR
Sbjct: 212 LPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQEADPEVRSN 271
Query: 634 AAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYNH 455
A +G GVLA+ G ++A +N A+A+++ +
Sbjct: 272 AIFGMGVLAEHGGHPAQEHFPKLLELLFPLLARE-----RHDRVRDNICGALARLLMASP 326
Query: 454 SQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQRVLATLAEAF 275
++ +++ L LP+ ED EE + L L S + D +L +
Sbjct: 327 TRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVI--DVAPELLRICSLIL 384
Query: 274 RADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIAL 131
+ +P D A ++ L + + + F + L +L D + LQ L
Sbjct: 385 ADNKIPPDTKA-ALLLLLTFLAKQHTDSFQAALGSLPVDKAQELQAVL 431
>AK026991-1|BAB15616.1| 757|Homo sapiens protein ( Homo sapiens cDNA:
FLJ23338 fis, clone HEP13242. ).
Length = 757
Score = 47.2 bits (107), Expect = 7e-05
Identities = 49/228 (21%), Positives = 93/228 (40%)
Frame = -3
Query: 814 LPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQA 635
LP LV +++ +A+ + I+ G A ++ L +L+ +E++PEVR
Sbjct: 535 LPLLVCRTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQEADPEVRSN 594
Query: 634 AAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYNH 455
A +G GVLA+ G ++A +N A+A+++ +
Sbjct: 595 AIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLARE-----RHDRVRDNICGALARLLMASP 649
Query: 454 SQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQRVLATLAEAF 275
++ +++ L LP+ ED EE + L L S + D +L +
Sbjct: 650 TRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVI--DVAPELLRICSLIL 707
Query: 274 RADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIAL 131
+ +P D A ++ L + + + F + L +L D + LQ L
Sbjct: 708 ADNKIPPDTKA-ALLLLLTFLAKQHTDSFQAALGSLPVDKAQELQAVL 754
>AF411122-1|AAL78660.1| 1081|Homo sapiens importin 4 protein.
Length = 1081
Score = 47.2 bits (107), Expect = 7e-05
Identities = 49/228 (21%), Positives = 93/228 (40%)
Frame = -3
Query: 814 LPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQA 635
LP LV +++ +A+ + I+ G A ++ L +L+ +E++PEVR
Sbjct: 859 LPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQEADPEVRSN 918
Query: 634 AAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYNH 455
A +G GVLA+ G ++A +N A+A+++ +
Sbjct: 919 AIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLARE-----RHDRVRDNICGALARLLMASP 973
Query: 454 SQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQRVLATLAEAF 275
++ +++ L LP+ ED EE + L L S + D +L +
Sbjct: 974 TRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVI--DVAPELLRICSLIL 1031
Query: 274 RADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIAL 131
+ +P D A ++ L + + + F + L +L D + LQ L
Sbjct: 1032 ADNKIPPDTKA-ALLLLLTFLAKQHTDSFQAALGSLPVDKAQELQAVL 1078
>AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant protein.
Length = 1264
Score = 47.2 bits (107), Expect = 7e-05
Identities = 49/228 (21%), Positives = 93/228 (40%)
Frame = -3
Query: 814 LPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQA 635
LP LV +++ +A+ + I+ G A ++ L +L+ +E++PEVR
Sbjct: 1042 LPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQEADPEVRSN 1101
Query: 634 AAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYNH 455
A +G GVLA+ G ++A +N A+A+++ +
Sbjct: 1102 AIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLARE-----RHDRVRDNICGALARLLMASP 1156
Query: 454 SQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQRVLATLAEAF 275
++ +++ L LP+ ED EE + L L S + D +L +
Sbjct: 1157 TRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVI--DVAPELLRICSLIL 1214
Query: 274 RADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIAL 131
+ +P D A ++ L + + + F + L +L D + LQ L
Sbjct: 1215 ADNKIPPDTKA-ALLLLLTFLAKQHTDSFQAALGSLPVDKAQELQAVL 1261
>AB208897-1|BAD92134.1| 758|Homo sapiens IPO4 protein variant
protein.
Length = 758
Score = 47.2 bits (107), Expect = 7e-05
Identities = 49/228 (21%), Positives = 93/228 (40%)
Frame = -3
Query: 814 LPHLVQLLAPNRPYSDRQWAICIFDDIIEFGGPACVKYQDIFLEPMLNALRESEPEVRQA 635
LP LV +++ +A+ + I+ G A ++ L +L+ +E++PEVR
Sbjct: 536 LPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQEADPEVRSN 595
Query: 634 AAYGCGVLAQFGDVQFXXXXXXXXXXXXAIVAEPDARSLEKINATENAISAVAKIIKYNH 455
A +G GVLA+ G ++A +N A+A+++ +
Sbjct: 596 AIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLARE-----RHDRVRDNICGALARLLMASP 650
Query: 454 SQINRDEIITHWLTWLPVTEDTEEAPHVYALLCELASSGHGALSTPDAPQRVLATLAEAF 275
++ +++ L LP+ ED EE + L L S + D +L +
Sbjct: 651 TRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVI--DVAPELLRICSLIL 708
Query: 274 RADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKEALQIAL 131
+ +P D A ++ L + + + F + L +L D + LQ L
Sbjct: 709 ADNKIPPDTKA-ALLLLLTFLAKQHTDSFQAALGSLPVDKAQELQAVL 755
>BC008863-1|AAH08863.1| 346|Homo sapiens polymerase (RNA) I
polypeptide C, 30kDa protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 529 ARSLEKINATENAISAVAKIIKYNHSQINRDEIITHWLTWLPVTED 392
A + +I E AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 73 ANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 118
>BC008118-1|AAH08118.1| 338|Homo sapiens POLR1C protein protein.
Length = 338
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 529 ARSLEKINATENAISAVAKIIKYNHSQINRDEIITHWLTWLPVTED 392
A + +I E AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 65 ANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 110
>AL355802-13|CAI42630.1| 139|Homo sapiens RP3-337H4.4 protein.
Length = 139
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 529 ARSLEKINATENAISAVAKIIKYNHSQINRDEIITHWLTWLPVTED 392
A + +I E AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 72 ANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 117
>AL355802-12|CAI42629.1| 346|Homo sapiens RP3-337H4.4 protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 529 ARSLEKINATENAISAVAKIIKYNHSQINRDEIITHWLTWLPVTED 392
A + +I E AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 73 ANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 118
>AL355802-11|CAI42628.1| 314|Homo sapiens RP3-337H4.4 protein.
Length = 314
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 529 ARSLEKINATENAISAVAKIIKYNHSQINRDEIITHWLTWLPVTED 392
A + +I E AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 73 ANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 118
>AF008442-1|AAC14354.1| 346|Homo sapiens RNA polymerase I subunit
hRPA39 protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.54
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 529 ARSLEKINATENAISAVAKIIKYNHSQINRDEIITHWLTWLPVTED 392
A + +I E AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 73 ANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 118
>AK129921-1|BAC85250.1| 219|Homo sapiens or (EC 1.10.2.2).
protein.
Length = 219
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -1
Query: 669 HYVNLNRKCVKPRPTVAAC*HSLVTYSLQPPAHELYLFWPPLSQSRTHALLKRSMQLKML 490
+++ + R C K S+ + + PP H +L P Q+ H +K + L +
Sbjct: 5 NWLEIPRNCAKYMQLHLGIHESMTSRAQPPPPHLPFLLLPCWPQTAMHGCMKEDLNLDLF 64
Query: 489 YLP 481
Y P
Sbjct: 65 YPP 67
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,916,616
Number of Sequences: 237096
Number of extensions: 2399861
Number of successful extensions: 5340
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5331
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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