Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15p16
(476 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 130 1e-32
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 130 1e-32
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 63 1e-12
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 0.73
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 0.73
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 0.73
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 1.3
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 6.8
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 6.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 6.8
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 9.0
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 21 9.0
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 130 bits (313), Expect = 1e-32
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = -1
Query: 476 CKFAEXKXKVDRRTGKSTXVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 297
CKFAE K K DRRTGK+T NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDM
Sbjct: 370 CKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDM 429
Query: 296 RQTVAVGVIKAVNF 255
RQTVAVGVIK+V F
Sbjct: 430 RQTVAVGVIKSVTF 443
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 130 bits (313), Expect = 1e-32
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = -1
Query: 476 CKFAEXKXKVDRRTGKSTXVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 297
CKFA+ K K DRR GK+T NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDM
Sbjct: 370 CKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDM 429
Query: 296 RQTVAVGVIKAVNF 255
RQTVAVGVIKAV F
Sbjct: 430 RQTVAVGVIKAVTF 443
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 63.3 bits (147), Expect = 1e-12
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = -1
Query: 476 CKFAEXKXKVDRRTGKSTXVNPKSIKSGDAAIVNLVPSK 360
CKFAE K K DRRTGK+T NPKSIKSGDAAIV L P+K
Sbjct: 81 CKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 24.2 bits (50), Expect = 0.73
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 148 KYRSCMKNCAVNSSSYFLPLVAFS 219
K+ C+KN A SSYF+ + F+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 0.73
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 148 KYRSCMKNCAVNSSSYFLPLVAFS 219
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 0.73
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 148 KYRSCMKNCAVNSSSYFLPLVAFS 219
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 1.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 109 CSPFFLRNTFR*MKYRSCMKN 171
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 416 NPKSIKSGDAAIVNLVPSKPLC 351
NP+ G +V L PS P C
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFC 87
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 416 NPKSIKSGDAAIVNLVPSKPLC 351
NP+ G +V L PS P C
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFC 88
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 6.8
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -2
Query: 394 EMQPLSTWYLPSL 356
+ P+ WY+PSL
Sbjct: 589 DKNPVQLWYVPSL 601
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 20.6 bits (41), Expect = 9.0
Identities = 6/27 (22%), Positives = 14/27 (51%)
Frame = +2
Query: 332 IPGRTLHIEAWKVPS*QWLHLQT*WIL 412
+P + W VP+ + +H+ W++
Sbjct: 13 LPAGPPRLLGWNVPAEELIHIPEHWLV 39
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 20.6 bits (41), Expect = 9.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 118 FFLRNTFR*MKYRSCMKN 171
FF R+ + ++YR C KN
Sbjct: 41 FFRRSIQQKIQYRPCTKN 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,773
Number of Sequences: 438
Number of extensions: 1952
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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