Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15p14
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113198-1|AAM29203.1| 425|Drosophila melanogaster AT03090p pro... 48 1e-05
AE013599-3068|AAF57424.3| 425|Drosophila melanogaster CG13442-P... 48 1e-05
AY089531-1|AAL90269.1| 617|Drosophila melanogaster LD02310p pro... 36 0.078
AE014296-1634|AAF50284.1| 617|Drosophila melanogaster CG4080-PA... 36 0.078
BT006012-1|AAO74695.1| 562|Drosophila melanogaster LD08641p pro... 34 0.24
AE014134-500|AAN10395.1| 562|Drosophila melanogaster CG2991-PC,... 34 0.24
AE014134-499|AAF51190.1| 562|Drosophila melanogaster CG2991-PB,... 34 0.24
AE014134-498|AAF51189.1| 562|Drosophila melanogaster CG2991-PA,... 34 0.24
AE014298-908|AAF46173.1| 266|Drosophila melanogaster CG17717-PA... 33 0.42
BT015257-1|AAT94486.1| 988|Drosophila melanogaster LP04173p pro... 29 5.1
AE014296-443|AAF47637.2| 988|Drosophila melanogaster CG1317-PB ... 29 5.1
>AY113198-1|AAM29203.1| 425|Drosophila melanogaster AT03090p
protein.
Length = 425
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -3
Query: 511 MCRICHGAEXX--LXXXCRXRXTXGXVHVRCLEXWLTEAXKSXCEXXGARYHTQRVHRY 341
+CRICH A+ L C + + VHV CLE W++ + + CE +Y+T++ RY
Sbjct: 166 VCRICHNADNPEQLVSPCLCKGSLTYVHVHCLECWISTSRCTTCELCQFQYNTEQTLRY 224
>AE013599-3068|AAF57424.3| 425|Drosophila melanogaster CG13442-PA
protein.
Length = 425
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -3
Query: 511 MCRICHGAEXX--LXXXCRXRXTXGXVHVRCLEXWLTEAXKSXCEXXGARYHTQRVHRY 341
+CRICH A+ L C + + VHV CLE W++ + + CE +Y+T++ RY
Sbjct: 166 VCRICHNADNPEQLVSPCLCKGSLTYVHVHCLECWISTSRCTTCELCQFQYNTEQTLRY 224
>AY089531-1|AAL90269.1| 617|Drosophila melanogaster LD02310p
protein.
Length = 617
Score = 35.5 bits (78), Expect = 0.078
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 514 EMCRICH---GAEXXLXXXCRXRXTXGXVHVRCLEXWLTEAXKSXCE 383
++CRICH + L C + VH CL+ WLT + + CE
Sbjct: 41 DICRICHCESDPQNPLLTPCYCSGSLKYVHQACLQQWLTASETNSCE 87
>AE014296-1634|AAF50284.1| 617|Drosophila melanogaster CG4080-PA
protein.
Length = 617
Score = 35.5 bits (78), Expect = 0.078
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 514 EMCRICH---GAEXXLXXXCRXRXTXGXVHVRCLEXWLTEAXKSXCE 383
++CRICH + L C + VH CL+ WLT + + CE
Sbjct: 41 DICRICHCESDPQNPLLTPCYCSGSLKYVHQACLQQWLTASETNSCE 87
>BT006012-1|AAO74695.1| 562|Drosophila melanogaster LD08641p
protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 538 EGRSLXAEEMCRICHGAEXX--LXXXCRXRXTXGXVHVRCLEXWLTEA 401
EG+S ++ C IC+ ++ L CR VH CL+ WL E+
Sbjct: 382 EGQSFLTKKDCWICYDSDKPEPLIQPCRCTGDVSSVHHECLKRWLVES 429
>AE014134-500|AAN10395.1| 562|Drosophila melanogaster CG2991-PC,
isoform C protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 538 EGRSLXAEEMCRICHGAEXX--LXXXCRXRXTXGXVHVRCLEXWLTEA 401
EG+S ++ C IC+ ++ L CR VH CL+ WL E+
Sbjct: 382 EGQSFLTKKDCWICYDSDKPEPLIQPCRCTGDVSSVHHECLKRWLVES 429
>AE014134-499|AAF51190.1| 562|Drosophila melanogaster CG2991-PB,
isoform B protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 538 EGRSLXAEEMCRICHGAEXX--LXXXCRXRXTXGXVHVRCLEXWLTEA 401
EG+S ++ C IC+ ++ L CR VH CL+ WL E+
Sbjct: 382 EGQSFLTKKDCWICYDSDKPEPLIQPCRCTGDVSSVHHECLKRWLVES 429
>AE014134-498|AAF51189.1| 562|Drosophila melanogaster CG2991-PA,
isoform A protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 538 EGRSLXAEEMCRICHGAEXX--LXXXCRXRXTXGXVHVRCLEXWLTEA 401
EG+S ++ C IC+ ++ L CR VH CL+ WL E+
Sbjct: 382 EGQSFLTKKDCWICYDSDKPEPLIQPCRCTGDVSSVHHECLKRWLVES 429
>AE014298-908|AAF46173.1| 266|Drosophila melanogaster CG17717-PA,
isoform A protein.
Length = 266
Score = 33.1 bits (72), Expect = 0.42
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -3
Query: 508 CRICHGAEXXLXXX---CRXRXTXGXVHVRCLEXWLTEAXKSXCEXXGARYH 362
CRIC + C + + G +H++CL+ W+ + CE A ++
Sbjct: 91 CRICRWNRNDMEIIKCPCNCKGSVGYIHLKCLKRWIMHRRDNRCEICNAVFN 142
>BT015257-1|AAT94486.1| 988|Drosophila melanogaster LP04173p
protein.
Length = 988
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Frame = -3
Query: 514 EMCRICH---GAEXXLXXXCRXRXTXGXVHVRCLEXWLTEAXKSXCEXXGARYHTQRVHR 344
++CR+C + L C + +H CL W+ + K CE + Q ++
Sbjct: 8 DICRVCRCEAQPDRPLFYPCICTGSIKYIHQDCLMLWMRYSHKEYCELCSYSFSFQPIYA 67
Query: 343 YGLARAM 323
+ R +
Sbjct: 68 PDMPRVL 74
>AE014296-443|AAF47637.2| 988|Drosophila melanogaster CG1317-PB
protein.
Length = 988
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Frame = -3
Query: 514 EMCRICH---GAEXXLXXXCRXRXTXGXVHVRCLEXWLTEAXKSXCEXXGARYHTQRVHR 344
++CR+C + L C + +H CL W+ + K CE + Q ++
Sbjct: 8 DICRVCRCEAQPDRPLFYPCICTGSIKYIHQDCLMLWMRYSHKEYCELCSYSFSFQPIYA 67
Query: 343 YGLARAM 323
+ R +
Sbjct: 68 PDMPRVL 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,095,910
Number of Sequences: 53049
Number of extensions: 378955
Number of successful extensions: 1076
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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