Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15p05
(864 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 308 7e-85
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 53 5e-08
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 50 3e-07
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 50 6e-07
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 48 2e-06
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 44 3e-05
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 44 4e-05
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 43 5e-05
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 43 6e-05
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 40 3e-04
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 38 0.001
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 36 0.010
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 36 0.010
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 34 0.023
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 34 0.023
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 34 0.030
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 33 0.040
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 32 0.091
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 32 0.12
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 31 0.16
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 30 0.49
SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosa... 29 0.85
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 29 0.85
SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyc... 29 0.85
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 29 0.85
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 29 0.85
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 29 1.1
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 29 1.1
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 28 2.0
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 28 2.0
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 27 2.6
SPCC1281.05 |rsc7||RSC complex subunit Rsc7|Schizosaccharomyces ... 27 3.4
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 27 4.5
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 26 6.0
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 26 6.0
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 26 6.0
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 26 6.0
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 7.9
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 26 7.9
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 26 7.9
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 26 7.9
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 26 7.9
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 308 bits (756), Expect = 7e-85
Identities = 155/253 (61%), Positives = 188/253 (74%)
Frame = -1
Query: 837 YEXPEMSKMMGDFGLRVMPGEFSDXEILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQ 658
Y P+ GDF L + G FSD EI+VLLGENGTGKTTF + +A N +
Sbjct: 351 YNYPDHVIEQGDFKLTIKSGGFSDAEIIVLLGENGTGKTTFCKWMAKNSD---------- 400
Query: 657 LHISYKPQKISPKSQGLVRSLLHDKIRDAYIHPQFLTDVMKPMKIEEIMDQEVQNLSGGE 478
L IS KPQ I+PK QG VR L KIR A+++ +F ++V KP+ I+ I+DQEV NLSGGE
Sbjct: 401 LKISMKPQTIAPKFQGTVRMLFLKKIRAAFLNGKFQSEVCKPLSIDNIIDQEVLNLSGGE 460
Query: 477 LQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMAT 298
LQRVA+ L LG PADVYLIDEPSAYLDSEQR++A+KVI+RFI+++++T F+VEHDFIMAT
Sbjct: 461 LQRVAICLALGMPADVYLIDEPSAYLDSEQRIIASKVIRRFIVNSRKTAFIVEHDFIMAT 520
Query: 297 YLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLELLGITFRRDPNNFRPRINKHASVKDI 118
YLADRVI+FEG PS +A + PQSLL GMN FL+ L +TFRRDPN RPRINK S D
Sbjct: 521 YLADRVILFEGQPSRDARCNPPQSLLTGMNTFLKNLDVTFRRDPNTLRPRINKFDSQMDQ 580
Query: 117 EQKRAGQYFFLED 79
EQK AG YFFLE+
Sbjct: 581 EQKNAGNYFFLEN 593
Score = 104 bits (249), Expect = 2e-23
Identities = 74/216 (34%), Positives = 109/216 (50%), Gaps = 27/216 (12%)
Frame = -1
Query: 762 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLHDK 583
++L L+G NG GK+T +++L+G ++P+ G P + Q ++ D
Sbjct: 104 QVLGLVGTNGIGKSTALKILSGKMKPNLGRYDNPPDWAEVVKYFRGSELQNFFTKVVEDN 163
Query: 582 IRDAYIHPQFLTDVMKPMK------------------IEEIMD---------QEVQNLSG 484
I+ A I PQ++ + + +K EE+MD +EV +LSG
Sbjct: 164 IK-ALIKPQYVDHIPRAIKTGDKTVSGLIKARANNNNFEEVMDHTDLQNLLNREVGHLSG 222
Query: 483 GELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIM 304
GELQR A+ + ADVY+ DEPS+YLD +QRL A +VI R +L VVEHD +
Sbjct: 223 GELQRFAIAAVATQKADVYMFDEPSSYLDIKQRLKAGRVI-RSLLATTNYVIVVEHDLSV 281
Query: 303 ATYLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLE 196
YL+D V V G PS P S+ G+N FL+
Sbjct: 282 LDYLSDFVCVLYGVPSMYGVVTLPYSVREGINIFLD 317
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 53.2 bits (122), Expect = 5e-08
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Frame = -1
Query: 807 GDFGLRVMPGEFSDXEILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLH-ISYKPQK 631
GDF LR + F ++ +++G G+GK++ I L G L ++GS LP+ +SY Q
Sbjct: 627 GDFCLRDLNIVFPRNKLSIVIGPTGSGKSSLISALLGELSLNKGSYNLPRSKGVSYVSQV 686
Query: 630 ISPKSQGLVRSLLHD--KIRDAYIHP----QFLTDVMK--PMKIEEIMDQEVQNLSGGEL 475
++ + ++L D I + Y LTD+ + EI ++ V LSGG+
Sbjct: 687 PWLRNATIRDNILFDYPYIEERYKKVIQACGLLTDLQSFVASDLTEIGEKGV-TLSGGQK 745
Query: 474 QRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHD 313
QR+AL + P + L+D+ + LD K + L RT +V H+
Sbjct: 746 QRIALARAVYSPTSIVLMDDVFSALDIHTSNWIYKHCFQSSLMENRTVILVTHN 799
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 50.4 bits (115), Expect = 3e-07
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Frame = -1
Query: 750 LLGENGTGKTTFIRMLAGNLEPDEG-SGQLPQLHISYKPQ------KISPKSQGLVRSLL 592
++G NG GK+T +++L L P G + P+L I+Y Q ++ + +
Sbjct: 549 VVGPNGAGKSTMLKLLIEQLHPTSGIVSRHPRLRIAYFAQHHVDTLDLNLNALSFLAKTF 608
Query: 591 HDKIRDAYIHPQFLTDVMKPMKIEEIMDQEVQNLSGGELQRVALVLCLG-KPADVYLIDE 415
K + Y V P+ +++++ LSGG+ RVA CLG + + ++DE
Sbjct: 609 PGKGEEEYRRHLGAFGVSGPLALQKMI-----TLSGGQKSRVAFA-CLGLQNPHILILDE 662
Query: 414 PSAYLDSEQRLVAAKVIKRF 355
P+ +LD E + +KRF
Sbjct: 663 PTNHLDMESMDALTRAVKRF 682
Score = 32.3 bits (70), Expect = 0.091
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = -1
Query: 522 EEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHA 343
+E+ + SGG R++L L D+ L+DEPS LD + + + ++
Sbjct: 345 QEMQSHATKTFSGGWRMRLSLARALFCQPDLLLLDEPSNMLD----VPSIAFLSEYLQTY 400
Query: 342 KRTGFVVEHDFIMATYLADRVI 277
K VV HD +A +I
Sbjct: 401 KNIVLVVSHDRSFLNEVATDII 422
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 49.6 bits (113), Expect = 6e-07
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 10/191 (5%)
Frame = -1
Query: 762 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQL--HISYKPQKISPKSQGLVRSLLH 589
+ +++G G+GK+T L G L G P + I+Y PQ ++ + ++L
Sbjct: 608 QFTLVVGSTGSGKSTLAMALLGELHVISGKMTTPSISQRIAYVPQAAWLRNGTIRSNILF 667
Query: 588 DKIRDAYIHPQFLTDVMKPMKIEEIMDQEV-------QNLSGGELQRVALVLCLGKPADV 430
+ D + Q + + + D ++ +LSGG+ QRV+L L A+V
Sbjct: 668 GEPYDEERYFQIIKACCLDSDLNSMNDGDLTYIHSNGSSLSGGQKQRVSLARALYSNAEV 727
Query: 429 YLIDEPSAYLD-SEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADRVIVFEGTPSS 253
Y+ D+ + LD S R + +L K T + H+ + +A+ VIV + + +
Sbjct: 728 YIFDDIFSALDVSTSRKIYESCFLSTLLQHK-TIILFTHNVSLCLPIAENVIVLKNSTAQ 786
Query: 252 NATAHAPQSLL 220
+ + Q L+
Sbjct: 787 LVSPDSIQELV 797
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 48.0 bits (109), Expect = 2e-06
Identities = 37/162 (22%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Frame = -1
Query: 750 LLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLHDKIRDA 571
L G NG+GK+T +R + N + + L +++ + + S V +L D
Sbjct: 465 LCGPNGSGKSTLMRAIV-NGQVEGFPTHLRTVYVEHDIDE-SEADTPSVDFILQDPAVPI 522
Query: 570 YIHPQFLTDVMKPMKIEEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSE 391
+ + + + +E+++ + +LSGG ++AL + K D+ L+DEP+ +LD
Sbjct: 523 KDRDEIVKALKENSFTDELINMPIGSLSGGWKMKLALTRAMFKNPDILLLDEPTNHLD-- 580
Query: 390 QRLVAAKVIKRFILHAKR-TGFVVEHDFIMATYLADRVIVFE 268
+V ++ F+++ K + +V HD ++ +I +E
Sbjct: 581 --VVNVAWLENFLVNQKDVSSIIVSHDSGFLDHVVQAIIHYE 620
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -1
Query: 522 EEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRF 355
E + ++ LSGG+ ++ L C V ++DEP+ YLD + +K +K F
Sbjct: 894 ELVSHSRIKGLSGGQKVKLVLAACTWLRPHVIVLDEPTNYLDRDSLGALSKGLKNF 949
Score = 31.1 bits (67), Expect = 0.21
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 756 LVLLGENGTGKTTFIRMLAGNLEPDEG 676
+ ++G NG GK+T I++L G L P G
Sbjct: 703 IAVIGPNGAGKSTLIKVLTGELLPTVG 729
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 44.0 bits (99), Expect = 3e-05
Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Frame = -1
Query: 750 LLGENGTGKTTFIRMLAG-NLEPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLHDK-IR 577
++G NG GK+T +R + +E ++ +++ Q S ++ + DK +
Sbjct: 475 VVGHNGCGKSTLLRAIGDYKVENFPSPDEVKTCFVAHSLQG-EDTSMAILDFVAQDKALL 533
Query: 576 DAYIHPQFLTDVMKPMKIE-EIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYL 400
+ Q D + + E+ + V +LSGG ++ L + + AD+ L+DEP+ +L
Sbjct: 534 TMNVTRQEAADALHSVGFTAEMQENPVASLSGGWKMKLELARAMLQKADILLLDEPTNHL 593
Query: 399 DSEQRLVAAKVIKRFILHAKR-TGFVVEHDFIMATYLADRVIVFEG 265
D + ++ ++ K T +V HD ++ +I +EG
Sbjct: 594 D----VANIAWLEAYLTSQKNITCLIVSHDSSFLDHVCTDIIHYEG 635
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 756 LVLLGENGTGKTTFIRMLAGNLEPDEGS-GQLPQLHISYKPQ 634
+ +LG NG GK+T I++L G + P EG + P L + Y Q
Sbjct: 722 VAILGPNGAGKSTLIKVLIGEVIPQEGKVFKHPNLRVGYVAQ 763
Score = 32.7 bits (71), Expect = 0.069
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -1
Query: 501 VQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSE 391
+ +LSGG+ +V + CL + ++DEP+ +LD +
Sbjct: 908 ISSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFLDRD 944
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 43.6 bits (98), Expect = 4e-05
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 23/232 (9%)
Frame = -1
Query: 816 KMMGDFGLRVMPGEFSDXEILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHI---- 649
K++ L V PG+F + +G +G GK+T I ++ + D G+ + +++
Sbjct: 1135 KVLRGLNLTVKPGQF-----VAFVGSSGCGKSTTIGLIERFYDCDNGAVLVDGVNVRDYN 1189
Query: 648 --SYKPQ--KISPKS---QGLVR-SLLHDKIRDAYIHPQFLTDVMKPMKIEEIM------ 511
Y+ Q +S + QG VR +++ +D + + + + K I E +
Sbjct: 1190 INDYRKQIALVSQEPTLYQGTVRENIVLGASKD--VSEEEMIEACKKANIHEFILGLPNG 1247
Query: 510 -----DQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILH 346
Q+ +LSGG+ QR+A+ L + + L+DE ++ LDS V + +
Sbjct: 1248 YNTLCGQKGSSLSGGQKQRIAIARALIRNPKILLLDEATSALDSHSEKVVQEALN--AAS 1305
Query: 345 AKRTGFVVEHDFIMATYLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLELL 190
RT + H + + AD + VF+G + A HA L+ ++ EL+
Sbjct: 1306 QGRTTVAIAHR-LSSIQDADCIFVFDGGVIAEAGTHA--ELVKQRGRYYELV 1354
Score = 36.3 bits (80), Expect = 0.006
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = -1
Query: 492 LSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHD 313
+SGG+ QR+A+ + + L+DE ++ LDS+ ++ K + RT V+ H
Sbjct: 568 MSGGQKQRIAIARAVISDPKILLLDEATSALDSKSEVLVQKALDN--ASRSRTTIVIAHR 625
Query: 312 FIMATYLADRVIVFEGTPSSNATAHAPQSLLNG 214
+ AD ++V +H LNG
Sbjct: 626 -LSTIRNADNIVVVNAGKIVEQGSHNELLDLNG 657
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 43.2 bits (97), Expect = 5e-05
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Frame = -1
Query: 762 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLV---RSLL 592
+++ L+GE+G GK+T +R+L + + GS + I S G+V +L
Sbjct: 611 KVIALVGESGGGKSTIMRILLRFFDVNSGSITIDDQDIRNVTLSSLRSSIGVVPQDSTLF 670
Query: 591 HDKI--RDAYIHPQFLTD-VMKPMKIEEIMDQEVQ--------------NLSGGELQRVA 463
+D I Y P + + K +I D+ +Q LSGGE QRVA
Sbjct: 671 NDTILYNIKYAKPSATNEEIYAAAKAAQIHDRILQFPDGYNSRVGERGLKLSGGEKQRVA 730
Query: 462 LVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEH 316
+ + K + L+DE ++ LD+ + R L + RT V+ H
Sbjct: 731 VARAILKDPSIILLDEATSALDTNTERQIQAALNR--LASGRTAIVIAH 777
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 42.7 bits (96), Expect = 6e-05
Identities = 43/182 (23%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Frame = -1
Query: 762 EILVLLGENGTGKTTFIRMLAGNLEPDE---GSGQLPQLHISYKPQKIS-----PKSQG- 610
E + ++G +G+GK+T + +L ++ L + ++ +K++ P G
Sbjct: 1129 EKVAIVGISGSGKSTLVELLRKTYPSEDIYIDGYPLTNIDTNWLLKKVAIVDQKPHLLGS 1188
Query: 609 -LVRSLLHDKIRDAY-----IHPQFLTDVMK--PMKIEEIMDQEVQNLSGGELQRVALVL 454
++ SLL+ RD + ++T+V++ P ++ + + +N SGG++QR+A
Sbjct: 1189 TILESLLYGVDRDINSVMDALDKTYMTEVIQNLPNGLDTPLLEFSKNFSGGQIQRLAFAR 1248
Query: 453 CLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADRVIV 274
L + + ++DE ++ LDS+ L+ K I+ + T ++ H + LADR+IV
Sbjct: 1249 ALLRNPRLLILDECTSALDSKSSLLLEKTIQ----NLSCTVLIITHQPSLMK-LADRIIV 1303
Query: 273 FE 268
+
Sbjct: 1304 MD 1305
Score = 42.3 bits (95), Expect = 9e-05
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Frame = -1
Query: 762 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLV--RSLLH 589
E++ ++G +G+GK+TFI +L P G+ L + + + + LV + ++
Sbjct: 463 ELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFPLEEIDEHVLGSTITLVCQQPVIF 522
Query: 588 DK-------IRDAYIHPQFLTDVMKPMKIEEI---MDQEVQ------NLSGGELQRVALV 457
D +R+ +V + ++E DQ +LSGG+ QR+AL
Sbjct: 523 DMTIRENIIMRNENASESDFEEVCRLALVDEFALTFDQSYDTPCKEASLSGGQQQRIALA 582
Query: 456 LCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAK-RTGFVVEHD 313
L + ++ ++DEP++ LD + + I+ H K +T V+ HD
Sbjct: 583 RALLRDTEILILDEPTSALDPITKNLVMDAIR---AHRKGKTTLVITHD 628
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 40.3 bits (90), Expect = 3e-04
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Frame = -1
Query: 756 LVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLHDK-- 583
+ ++G+NGTGK+T + ++ G L P EG+ Y K++ SQ L +DK
Sbjct: 419 VAIVGKNGTGKSTLLNLITGLLIPIEGNVS------RYSGLKMAKYSQHSADQLPYDKSP 472
Query: 582 ---IRDAYIHPQF-------LTDVMKPMKIEEI-MDQEVQNLSGGELQRVALVLCLGKPA 436
I D Y P+F V+ + + E++ LS G RV +
Sbjct: 473 LEYIMDTY-KPKFPERELQQWRSVLGKFGLSGLHQTSEIRTLSDGLKSRVVFAALALEQP 531
Query: 435 DVYLIDEPSAYLDSEQRLVAAKVI 364
+ L+DEP+ +LD AK I
Sbjct: 532 HILLLDEPTNHLDITSIDALAKAI 555
Score = 33.5 bits (73), Expect = 0.040
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -1
Query: 522 EEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSE 391
+E+M + +++SGG RVAL L + L+DEP+ +LD E
Sbjct: 211 QEMMAKPTKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHLDLE 254
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = -1
Query: 492 LSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHD 313
LSGG+ QR+A+ L + ++DE ++ LD E ++ K I+ + + T + H
Sbjct: 620 LSGGQKQRIAIARALLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNRSMTTITIAHK 679
Query: 312 FIMATYLADRVIV 274
+ AD++IV
Sbjct: 680 -LATIRRADQIIV 691
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 35.5 bits (78), Expect = 0.010
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -1
Query: 507 QEVQNLSGGE--LQRVALVLCLG--KPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAK 340
+ + NLSGGE L +ALV L KP +Y++DE A LD + + A IK K
Sbjct: 1225 KNISNLSGGEKTLSSLALVFALHNYKPTPLYVMDEIDAALDFKNVSIVANYIKE---RTK 1281
Query: 339 RTGFVV 322
F+V
Sbjct: 1282 NAQFIV 1287
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 35.5 bits (78), Expect = 0.010
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = -1
Query: 531 MKIEEIMDQEVQNLSGGELQRVALVLCLG----KPADVYLIDEPSAYLDSEQRLVAAKVI 364
+KI I + LSGG+ VAL L + KPA +Y++DE A LD ++I
Sbjct: 1073 VKIGSIWKDSLAELSGGQRSLVALALIMSLLKYKPAPMYILDEIDAALDLSHTQNIGRLI 1132
Query: 363 K 361
K
Sbjct: 1133 K 1133
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 34.3 bits (75), Expect = 0.023
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -1
Query: 762 EILVLLGENGTGKTTFIRMLAGNL 691
E L+L+GE GTGKTT I++LAG L
Sbjct: 468 EPLLLVGETGTGKTTTIQLLAGLL 491
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 34.3 bits (75), Expect = 0.023
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Frame = -1
Query: 762 EILVLLGENGTGKTTFIRMLAGNLEPDEGSG-QLPQLHISYKPQKI---SPKSQGLVRSL 595
E+ + G+ G GK++ + GN+ + GS Q L + + I + + L S
Sbjct: 608 ELTCIFGKVGAGKSSLLEACMGNMYKNSGSVFQCGSLAYAAQQPWIFDATIRENILFGSE 667
Query: 594 LHDKIRDAYIHPQFLT---DVMKPMKIEEIMDQEVQNLSGGELQRVALVLCLGKPADVYL 424
++ + IH L ++ E+ Q+ +LSGG+ R++L + AD+YL
Sbjct: 668 FDPELYEKTIHACCLKRDFEIFTEGDQTEV-GQKGASLSGGQKSRISLARAIYSQADIYL 726
Query: 423 IDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMAT 298
+D+ L S + V+ +IK GF+ H ++ T
Sbjct: 727 LDD---VLSSVDQHVSRDLIKNLF---GPEGFLRTHCVVLTT 762
Score = 31.5 bits (68), Expect = 0.16
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Frame = -1
Query: 801 FGLRVMPGEFSDXEILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLP------------Q 658
F L + E S E + ++G G GK+T L +EP EG ++ +
Sbjct: 1241 FALNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEGKIEIDNEDITKFGLYDLR 1300
Query: 657 LHISYKPQKISPKSQGLVRSLL--HDKIRDAYIHPQFLTDVMKP--MKIEEIMDQEV--- 499
+S PQ+ S +G +R L + ++ D I +K ++E+ + V
Sbjct: 1301 SRLSIIPQE-SQIFEGNIRENLDPNHRLTDKKIWEVLEIASLKNCISQLEDGLYSRVAEG 1359
Query: 498 -QNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVI-KRFILHAKRTGFV 325
N S G+ Q + L L + L+DE +A + +E + + I KRF RT
Sbjct: 1360 GANFSSGQRQLICLARVLLTSTRILLLDEATASVHAETDAIVQQTIRKRF---KDRTILT 1416
Query: 324 VEHDFIMATYLADRVIVFE 268
V H I +DR++V +
Sbjct: 1417 VAHR-INTVMDSDRILVLD 1434
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 33.9 bits (74), Expect = 0.030
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -1
Query: 471 RVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFI-LHAKRTGF---VVEHD 313
R+AL CLG + +DEP+ LD E AK + R + K+ F V+ HD
Sbjct: 1195 RLALAECLGVNCGILALDEPTTNLDEENICSLAKNLSRIVEFRRKQANFQLIVITHD 1251
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -1
Query: 759 ILVLLGENGTGKTTFIRML 703
+ +++G+NG+GKTT I L
Sbjct: 29 LTLIVGQNGSGKTTIIECL 47
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 33.5 bits (73), Expect = 0.040
Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 28/163 (17%)
Frame = -1
Query: 750 LLGENGTGKTTFIRMLAGNLEPD----------EGSGQLPQLHISYKPQKISPKSQGLVR 601
++G G+G+TTF+R + G+ P +G P I K S + +
Sbjct: 35 IIGNTGSGRTTFLRCIQGSFTPSPSTSFSYPFLKGKSDSPWQAIQLLDFKSSGQQRAAYY 94
Query: 600 SLLHDKIRD-------------AY-----IHPQFLTDVMKPMKIEEIMDQEVQNLSGGEL 475
S + RD AY Q + + ++ ++ + NLS G+
Sbjct: 95 SERYHSFRDKEHDTTLEKWLLGAYRGNEKFASQHVQEAASMTQLSHLLPSSLINLSNGQS 154
Query: 474 QRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILH 346
+R L L + + L+DEP A LD R V + ++ H
Sbjct: 155 RRAMLASKLVQRPQLLLLDEPYAGLDVTSRSVLSSLLGEMSNH 197
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 32.3 bits (70), Expect = 0.091
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 756 LVLLGENGTGKTTFIRMLAGNLEPDEGS 673
+ L+G NG GKTT I+++ ++P GS
Sbjct: 623 VALVGPNGAGKTTLIKLILEKVQPSTGS 650
Score = 31.1 bits (67), Expect = 0.21
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 522 EEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSE 391
+E++ + LSGG R+AL L + ++DEP+ +LD E
Sbjct: 411 DEMIAKRTNELSGGWRMRIALARILFIKPTLMMLDEPTNHLDLE 454
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 750 LLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKIS 625
L+ NG+GK+T + +A L P S L Y P +++
Sbjct: 306 LIAPNGSGKSTLLHAIACGLIPTPSSLDFYLLDREYIPNELT 347
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = -1
Query: 756 LVLLGENGTGKTTFI-RMLAGNLE 688
LVL+G+ GTGKTTF+ R L G E
Sbjct: 12 LVLVGDGGTGKTTFVKRHLTGEFE 35
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 31.5 bits (68), Expect = 0.16
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Frame = -1
Query: 762 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLHDK 583
E+ ++G+ G GK++ + GN++ GS I+Y Q+ + + ++L
Sbjct: 610 ELCCIVGKVGMGKSSLLEACLGNMQKHSGS-VFRCGSIAYAAQQPWILNATIQENILFGL 668
Query: 582 IRDAYIHPQFLTD--VMKPMKIEEIMDQ-EVQ----NLSGGELQRVALVLCLGKPADVYL 424
D + + + +++ +I DQ EV +LSGG+ R++L + +D+YL
Sbjct: 669 ELDPEFYEKTIRACCLLRDFEILADGDQTEVGEKGISLSGGQKARISLARAVYSRSDIYL 728
Query: 423 IDEPSAYLD 397
+D+ + +D
Sbjct: 729 LDDILSAVD 737
Score = 31.5 bits (68), Expect = 0.16
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 495 NLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIK 361
NLS G+ Q + L L P V L+DE +A +D E + + I+
Sbjct: 1360 NLSSGQRQLMCLTRALLTPTRVLLLDEATAAVDVETDAIVQRTIR 1404
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 762 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHIS 646
E + ++G G GK+T L +EP G QL ++I+
Sbjct: 1252 EKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINIT 1290
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 29.9 bits (64), Expect = 0.49
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1
Query: 771 SDXEILVLLGENGTGKTTFI 712
S +ILVLLGE G+GKTT I
Sbjct: 524 SKNQILVLLGETGSGKTTQI 543
>SPAC637.08 |||iron-sulfur cluster assembly ATPase
Nbp35|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 0.85
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 762 EILVLLGENGTGKTTFIRMLAGNLEPDE 679
+ILVL G+ G GK+TF LA L +E
Sbjct: 62 KILVLSGKGGVGKSTFSSQLAWGLSLEE 89
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 29.1 bits (62), Expect = 0.85
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 22/146 (15%)
Frame = -1
Query: 762 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLP----------QLHISYKPQKISPKSQ 613
++ L+GE+G GKTT + +LA ++ +G + Q Y Q+ +
Sbjct: 912 KLTALMGESGAGKTTLLNVLAQRVDTGVVTGDMLVNGRGLDSTFQRRTGYVQQQDVHIGE 971
Query: 612 GLVRSLLH--DKIRDAYIHP-----QFLTDVMKPMKIEEIMDQEVQNLSGG----ELQRV 466
VR L +R P +++ V+K +++E + + G + +R
Sbjct: 972 STVREALRFSAALRQPASVPLSEKYEYVESVIKLLEMESYAEAIIGTPGSGLNVEQRKRA 1031
Query: 465 AL-VLCLGKPADVYLIDEPSAYLDSE 391
+ V KPA + +DEP++ LDS+
Sbjct: 1032 TIGVELAAKPALLLFLDEPTSGLDSQ 1057
>SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 164
Score = 29.1 bits (62), Expect = 0.85
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = -1
Query: 585 KIRDAYIHPQFLTDVMKPMKIEEIMDQEVQNLSGGELQRVA------LVLCLGKPADVYL 424
+ DA +H +TD+++ + EE++ E ++L +R+A V C+ + D+Y
Sbjct: 28 RFTDAVLHTHAITDLIRDTQKEELIAAEFKSLPKDWSERLASENPADYVACIEELLDIYP 87
Query: 423 IDEPSAYLDS 394
+ YL++
Sbjct: 88 MQGGREYLET 97
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 29.1 bits (62), Expect = 0.85
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 257 EGVPSNTITRSARYVAIIKSCSTTKPVRLAWRMNLLITL 373
E +P N +R +YVAI K +T+ P R+ + +L L
Sbjct: 112 EKIPVNEDSRKPKYVAIKKIYATSSPARIYNELEILYLL 150
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 29.1 bits (62), Expect = 0.85
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -1
Query: 423 IDEPSAYLDSEQ---RLVAAKVIKRFILHAKRTGFVVEHDFIMATY 295
ID S LDS R A V+ IL+ + TGF +DFI AT+
Sbjct: 965 IDYDSPELDSVYEGVRTTIAVVLSDLILNVEPTGFSFVYDFIRATF 1010
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -1
Query: 756 LVLLGENGTGKTTFIRML-AGNLEPDE 679
++L G +GTGKTTF L A +L+P++
Sbjct: 33 IMLCGASGTGKTTFFNTLFATSLQPEK 59
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 28.7 bits (61), Expect = 1.1
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Frame = -1
Query: 753 VLLGENGTGKTTFIRMLAGNLEPDEG----SGQLPQLHISYKPQKISPKSQGLVRSLLHD 586
+L+G NG GK+T +++L+G G G+ P S + ++ + ++H
Sbjct: 34 LLVGANGAGKSTLLKLLSGKSLAKAGHISVGGKDPFRESS--SAFVYLGTEWVNNPVIHR 91
Query: 585 KIRDAYIHPQFLTDVMKPMK--IEEIMDQEVQ----NLSGGELQRVALVLCLGKPADVYL 424
+ A + D + + I+D +++ +S GE +RV L + L +P +V L
Sbjct: 92 DMSVARLIASVGGDKFAERRDFLISILDIDLRWRMHAVSDGERRRVQLCMGLLRPFEVLL 151
Query: 423 IDEPSAYLD 397
+DE + LD
Sbjct: 152 LDEVTVDLD 160
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 753 VLLGENGTGKTTFIRMLAGNLEPD 682
+L G G+GKT+F+ LAG L+ D
Sbjct: 246 LLYGPPGSGKTSFLYALAGELDYD 269
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 756 LVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQ 658
L + G GTGKT + + NL+ GQLP+
Sbjct: 364 LYISGTPGTGKTATVHEVIWNLQELSREGQLPE 396
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 27.5 bits (58), Expect = 2.6
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -1
Query: 768 DXEILVLLGENGTGKTT 718
D ++L+++GE G+GKTT
Sbjct: 507 DNQVLIVVGETGSGKTT 523
>SPCC1281.05 |rsc7||RSC complex subunit Rsc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 390
Score = 27.1 bits (57), Expect = 3.4
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 10/142 (7%)
Frame = -1
Query: 690 EPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLHDKIRDAYIHPQFLTD------VMKPM 529
+ +E SG+ + + + +P+ +P S V +D Y H L D V+ P
Sbjct: 40 DDEEYSGRTRRRNRNTRPRVSAPSSSSTVVP------KDLYSHRATLEDDELNFGVVDPE 93
Query: 528 KIEEIMDQEVQNLSGGELQRVALVLCLGKPADVYLID-EPS---AYLDSEQRLVAAKVIK 361
+++ E+ L+GG R CLG+ +Y++ EP+ Y DS + + +
Sbjct: 94 GEKKV--NELGYLNGGREYRCRTFTCLGRGNRLYMLSTEPARAMGYRDSYLLFLKHRSLH 151
Query: 360 RFILHAKRTGFVVEHDFIMATY 295
+ I+ ++E + I +Y
Sbjct: 152 KIIVDDSEKWDLIERNIIPHSY 173
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 774 FSDXEILVLLGENGTGKTTFI 712
+ + +I+V +GE G+GKTT I
Sbjct: 88 YHENQIIVFVGETGSGKTTQI 108
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 692 RFPANILINVVFPVPFSPSNTKISXSENSPGITRNPKSPI 811
RF + P P SPSN+K SEN +N SPI
Sbjct: 162 RFSISESAGAAAPTP-SPSNSKSPPSENRKNRLQNVLSPI 200
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 786 MPGEFSDXEILVLLGENGTGKTTFIRMLAGNL 691
+ G S ++L+G G GKTT +++A L
Sbjct: 856 LKGSISKNASIILIGMRGAGKTTIGKIIAKQL 887
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 355 EPFNYFSCYQTLFRIQVS*RFINKVNISRFTKTQHESY 468
E F Y++ L + ++ NK+ +S+FT QH Y
Sbjct: 558 EIFEYYNKPWNLLVLYSLLQYENKLTVSQFTAMQHSEY 595
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 756 LVLLGENGTGKTTFIRMLA 700
++L G GTGKTT R++A
Sbjct: 123 MILWGSAGTGKTTLARLIA 141
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 756 LVLLGENGTGKTTFIRML 703
L+L GE+G GKTTF L
Sbjct: 31 LMLCGESGLGKTTFCNTL 48
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 2 YTVGRSSPCDSNNIYKYNNVYIF 70
Y + P + NNIY NN+++F
Sbjct: 106 YVIDSHRPHNLNNIYIENNIFVF 128
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 777 EFSDXEILVLLGENGTGKTTFI 712
+ D ++V++GE G+GK+T I
Sbjct: 108 QIQDNRVIVVVGETGSGKSTQI 129
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 25.8 bits (54), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 864 RRDKKG*THYEXPEMS-KMMGDFGLRVMPGEFSDXEILVLLGENGTGKTTFIRML 703
R KK E ++S K + ++P SD + +LL +N GK FIR L
Sbjct: 165 RERKKIEKKQEAKDLSLKNRAALDIDILPPSSSDKDKALLLLDNELGKNKFIRKL 219
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 777 EFSDXEILVLLGENGTGKTTFIRML 703
E E+L++ G N GK+T+IR +
Sbjct: 710 EHGSSELLIITGPNMGGKSTYIRQV 734
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,614,778
Number of Sequences: 5004
Number of extensions: 75786
Number of successful extensions: 301
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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