Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15n22
(842 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 23 3.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 3.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 3.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.5
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 22 6.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 8.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 8.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 8.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 8.1
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 8.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 8.1
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 8.1
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 544 QRCKAGHKEVQPRKGYHIDR*LS*IRVKLPWKPQTRCH 657
Q + H E++ + H+ L ++V +P P+T H
Sbjct: 47 QGSRTTHNELEKNRRAHLRNCLEKLKVLVPLGPETSRH 84
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKPVEEQNDDS 21
YR TS R R T ++K+P N++S
Sbjct: 59 YRETSKERSRNRTERERSKEPKIISNNNS 87
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKPVEEQNDDS 21
YR TS R R T ++K+P N++S
Sbjct: 59 YRETSKERSRNRTERERSKEPKIISNNNS 87
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKPVEEQNDDS 21
YR TS R R T ++K+P N++S
Sbjct: 59 YRETSKERSRNRTERERSKEPKIISNNNS 87
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKPVEEQNDDS 21
YR TS R R T ++K+P N++S
Sbjct: 59 YRETSKERSRNRTERERSKEPKIISNNNS 87
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKPVEEQNDDS 21
YR TS R R T ++K+P N++S
Sbjct: 59 YRETSKERSRNRTERERSKEPKIISNNNS 87
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKPVEEQNDDS 21
YR TS R R T ++K+P N++S
Sbjct: 59 YRETSKERSRNRTERERSKEPKIISNNNS 87
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKPVEEQNDDS 21
YR TS R R T ++K+P N++S
Sbjct: 59 YRETSKERSRNRTERERSKEPKIISNNNS 87
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKPVEEQNDDS 21
YR TS R R T ++K+P N++S
Sbjct: 59 YRETSKERSRNRTERERSKEPKIISNNNS 87
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKPVEEQNDDS 21
YR TS R R T ++K+P N++S
Sbjct: 59 YRETSKERSRNRTERERSKEPKIISNNNS 87
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKPVEEQNDDS 21
YR TS R R T ++K+P N++S
Sbjct: 292 YRETSKERSRNRTERERSKEPKIISNNNS 320
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKPVEEQNDDS 21
YR TS R R T ++K+P N++S
Sbjct: 292 YRETSKERSRNRTERERSKEPKIISNNNS 320
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 22.2 bits (45), Expect = 6.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 619 GSTKVSGQYDTLSEAALLYARLCTADVKK*SAVPR 515
GST ++ DT+S + AR D + AVP+
Sbjct: 97 GSTPLTFVNDTVSFTTTVSARFWLMDCRNIGAVPK 131
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKP 45
YR TS R R T ++K+P
Sbjct: 59 YRKTSKERSRDRTERERSKEP 79
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKP 45
YR TS R R T ++K+P
Sbjct: 59 YRKTSKERSRDRTERERSKEP 79
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKP 45
YR TS R R T ++K+P
Sbjct: 59 YRKTSKERSRDRTERERSKEP 79
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKP 45
YR TS R R T ++K+P
Sbjct: 59 YRKTSKERSRDRTERERSKEP 79
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKP 45
YR TS R R T ++K+P
Sbjct: 59 YRKTSKERSRDRTERERSKEP 79
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 107 YRSTSSIRMRPLTRSSKTKKP 45
YR TS R R T ++K+P
Sbjct: 59 YRKTSKERSRDRTERERSKEP 79
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -3
Query: 561 PGFAPLTSRNSQQYRALTVPELTQQ 487
PG P + +QQ++ + L+QQ
Sbjct: 219 PGMHPRQQQQAQQHQGVVTSPLSQQ 243
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,685
Number of Sequences: 438
Number of extensions: 5313
Number of successful extensions: 34
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -