Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15n21
(865 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 25 0.90
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 3.6
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 3.6
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 3.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 3.6
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 3.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 3.6
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 3.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 3.6
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.6
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 3.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 3.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 3.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 4.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 4.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 4.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 4.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 4.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 4.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 4.8
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 6.3
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 6.3
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 25.0 bits (52), Expect = 0.90
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 720 FAMASFNAFSRAVITSICVFNVSASIFEFLIVFSSFV 830
F +A + F VI + F+ S+F FLI+ SS++
Sbjct: 45 FKLACTDTFMEGVI--VLAFSGLFSVFSFLILVSSYI 79
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEKEYRK 58
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEKEYRK 58
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 39 SRSREREQNSYKNEREYRK 57
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 39 SRSREREQNSYKNEREYRK 57
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYRK 58
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEKEYRK 58
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 3.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 724 ANGRFGVTLATVSTLGQVPR 665
A+G F VTLAT +TL R
Sbjct: 117 ADGNFEVTLATKATLNYTGR 136
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 262 SRSREREQNSYKNEREYRK 280
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 262 SRSREREQNSYKNEREYRK 280
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 273 SRSREREQNSYKNEREYRK 291
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 273 SRSREREQNSYKNEREYRK 291
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYQK 58
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYQK 58
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYQK 58
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYQK 58
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYQK 58
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYQK 58
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = -2
Query: 69 NRNRKKKQNTYVKNLQYKK 13
+R+R+++QN+Y +Y+K
Sbjct: 40 SRSREREQNSYKNEREYQK 58
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 247 SIYKNGLLPR 276
SIYK+G+LPR
Sbjct: 84 SIYKHGMLPR 93
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1
Query: 247 SIYKNGLLPR 276
SIYK+G+LPR
Sbjct: 84 SIYKHGMLPR 93
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,480
Number of Sequences: 438
Number of extensions: 5031
Number of successful extensions: 48
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -