Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15n05
         (793 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034823-1|AAH34823.1|  287|Homo sapiens IQ motif containing K p...    78   3e-14
AF520570-1|AAM77340.1|  287|Homo sapiens unknown protein.              78   3e-14
BC010515-1|AAH10515.1|   77|Homo sapiens IQCK protein protein.         46   2e-04
BX284613-2|CAI19145.1|  573|Homo sapiens chromosome 1 open readi...    34   0.51 
BX284613-1|CAI19144.1|  186|Homo sapiens chromosome 1 open readi...    34   0.51 
BC113392-1|AAI13393.1|  524|Homo sapiens C1orf129 protein protein.     34   0.51 
BC113390-1|AAI13391.1|  523|Homo sapiens C1orf129 protein protein.     34   0.51 
AL031965-1|CAI20319.1|  573|Homo sapiens chromosome 1 open readi...    34   0.51 
AK027203-1|BAB15690.1|  510|Homo sapiens protein ( Homo sapiens ...    34   0.51 
AK027670-1|BAB55282.1|  372|Homo sapiens protein ( Homo sapiens ...    31   6.3  

>BC034823-1|AAH34823.1|  287|Homo sapiens IQ motif containing K
           protein.
          Length = 287

 Score = 78.2 bits (184), Expect = 3e-14
 Identities = 42/121 (34%), Positives = 66/121 (54%)
 Frame = -3

Query: 452 EYINSEVFIILLPALEETLRKAKIWEALVRQKCFFNGIDHIAQVLWNNNPRYPGRKFQSP 273
           EY+ + +F +LLP +   L +AK  +   R++  F   D + + L+N NP+  G  F   
Sbjct: 130 EYLETFIFPVLLPGMASLLHQAKKEKCFERKRTKFIACDFLTEWLYNQNPKRAGEPFTE- 188

Query: 272 HIFNMPWAREHLKNNPRPYYPKSWLWPEEYAATLIQKTVRQYFVQRQDDVQEMRDFWRKL 93
             F++P+  E LK +PRP  P S L  EE AA  IQ   R   V+   ++QE+R + +KL
Sbjct: 189 -FFSIPFVEERLKQHPRPPIPLSLLLTEEEAALYIQSFWRACVVRCDPEIQELRQWQKKL 247

Query: 92  K 90
           +
Sbjct: 248 R 248


>AF520570-1|AAM77340.1|  287|Homo sapiens unknown protein.
          Length = 287

 Score = 78.2 bits (184), Expect = 3e-14
 Identities = 42/121 (34%), Positives = 66/121 (54%)
 Frame = -3

Query: 452 EYINSEVFIILLPALEETLRKAKIWEALVRQKCFFNGIDHIAQVLWNNNPRYPGRKFQSP 273
           EY+ + +F +LLP +   L +AK  +   R++  F   D + + L+N NP+  G  F   
Sbjct: 130 EYLETFIFPVLLPGMASLLHQAKKEKCFERKRTKFIACDFLTEWLYNQNPKRAGEPFTE- 188

Query: 272 HIFNMPWAREHLKNNPRPYYPKSWLWPEEYAATLIQKTVRQYFVQRQDDVQEMRDFWRKL 93
             F++P+  E LK +PRP  P S L  EE AA  IQ   R   V+   ++QE+R + +KL
Sbjct: 189 -FFSIPFVEERLKQHPRPPIPLSLLLTEEEAALYIQSFWRACVVRCDPEIQELRQWQKKL 247

Query: 92  K 90
           +
Sbjct: 248 R 248


>BC010515-1|AAH10515.1|   77|Homo sapiens IQCK protein protein.
          Length = 77

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 25/70 (35%), Positives = 37/70 (52%)
 Frame = -3

Query: 323 VLWNNNPRYPGRKFQSPHIFNMPWAREHLKNNPRPYYPKSWLWPEEYAATLIQKTVRQYF 144
           ++ + NP+  G  F     F++P+  E LK +PRP  P S L  EE AA  IQ   R   
Sbjct: 9   IMTSQNPKRAGEPFTE--FFSIPFVEERLKQHPRPPIPLSLLLTEEEAALYIQSFWRACV 66

Query: 143 VQRQDDVQEM 114
           V+   ++QE+
Sbjct: 67  VRCDPEIQEL 76


>BX284613-2|CAI19145.1|  573|Homo sapiens chromosome 1 open reading
           frame 129 protein.
          Length = 573

 Score = 34.3 bits (75), Expect = 0.51
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 473 PFLKTECEYINSEVFIIL----LPALEETLRKAKIWEALVRQKCFFNGIDHIAQVLWNNN 306
           P LK    Y    + ++L    L  ++ TL K   W+ L    C+++G+  IA+ L   N
Sbjct: 439 PILKDRALYAQDALRVLLNCSGLQQVDITLMKENFWDQLSEDLCYYHGVCFIAKTLSEYN 498

Query: 305 -PRYP 294
            P++P
Sbjct: 499 FPQFP 503


>BX284613-1|CAI19144.1|  186|Homo sapiens chromosome 1 open reading
           frame 129 protein.
          Length = 186

 Score = 34.3 bits (75), Expect = 0.51
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 473 PFLKTECEYINSEVFIIL----LPALEETLRKAKIWEALVRQKCFFNGIDHIAQVLWNNN 306
           P LK    Y    + ++L    L  ++ TL K   W+ L    C+++G+  IA+ L   N
Sbjct: 45  PILKDRALYAQDALRVLLNCSGLQQVDITLMKENFWDQLSEDLCYYHGVCFIAKTLSEYN 104

Query: 305 -PRYP 294
            P++P
Sbjct: 105 FPQFP 109


>BC113392-1|AAI13393.1|  524|Homo sapiens C1orf129 protein protein.
          Length = 524

 Score = 34.3 bits (75), Expect = 0.51
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 473 PFLKTECEYINSEVFIIL----LPALEETLRKAKIWEALVRQKCFFNGIDHIAQVLWNNN 306
           P LK    Y    + ++L    L  ++ TL K   W+ L    C+++G+  IA+ L   N
Sbjct: 439 PILKDRALYAQDALRVLLNCSGLQQVDITLMKENFWDQLSEDLCYYHGVCFIAKTLSEYN 498

Query: 305 -PRYP 294
            P++P
Sbjct: 499 FPQFP 503


>BC113390-1|AAI13391.1|  523|Homo sapiens C1orf129 protein protein.
          Length = 523

 Score = 34.3 bits (75), Expect = 0.51
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 473 PFLKTECEYINSEVFIIL----LPALEETLRKAKIWEALVRQKCFFNGIDHIAQVLWNNN 306
           P LK    Y    + ++L    L  ++ TL K   W+ L    C+++G+  IA+ L   N
Sbjct: 439 PILKDRALYAQDALRVLLNCSGLQQVDITLMKENFWDQLSEDLCYYHGVCFIAKTLSEYN 498

Query: 305 -PRYP 294
            P++P
Sbjct: 499 FPQFP 503


>AL031965-1|CAI20319.1|  573|Homo sapiens chromosome 1 open reading
           frame 129 protein.
          Length = 573

 Score = 34.3 bits (75), Expect = 0.51
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 473 PFLKTECEYINSEVFIIL----LPALEETLRKAKIWEALVRQKCFFNGIDHIAQVLWNNN 306
           P LK    Y    + ++L    L  ++ TL K   W+ L    C+++G+  IA+ L   N
Sbjct: 439 PILKDRALYAQDALRVLLNCSGLQQVDITLMKENFWDQLSEDLCYYHGVCFIAKTLSEYN 498

Query: 305 -PRYP 294
            P++P
Sbjct: 499 FPQFP 503


>AK027203-1|BAB15690.1|  510|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23550 fis, clone LNG08970. ).
          Length = 510

 Score = 34.3 bits (75), Expect = 0.51
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 473 PFLKTECEYINSEVFIIL----LPALEETLRKAKIWEALVRQKCFFNGIDHIAQVLWNNN 306
           P LK    Y    + ++L    L  ++ TL K   W+ L    C+++G+  IA+ L   N
Sbjct: 439 PILKDRALYAQDALRVLLNCSGLQQVDITLMKENFWDQLSEDLCYYHGVCFIAKTLSEYN 498

Query: 305 -PRYP 294
            P++P
Sbjct: 499 FPQFP 503


>AK027670-1|BAB55282.1|  372|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14764 fis, clone NT2RP3003716, weakly similar to
           SLIT PROTEIN PRECURSOR. ).
          Length = 372

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 350 FNGIDHIAQVLWNNNPRYPGRKFQSPHIFNMPWAREHLKNNP 225
           F+ +D+I Q++  NNPRY G K        M W R+ L++ P
Sbjct: 14  FDDLDNITQLILRNNPRYCGCK--------MKWVRDWLQSLP 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,983,764
Number of Sequences: 237096
Number of extensions: 2442503
Number of successful extensions: 5385
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5382
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)