Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15m05
(218 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 0.99
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 1.7
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 20 4.0
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 19 6.9
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 19 9.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 19 9.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 19 9.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 19 9.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 19 9.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 19 9.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 19 9.2
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 19 9.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 19 9.2
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 0.99
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 11 ASTHLKQKQIKCYFRYWL 64
A TH + +K F YWL
Sbjct: 323 ADTHEMSEWVKVVFLYWL 340
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.0 bits (42), Expect = 1.7
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 154 LQPKNQFGSRSG--INGRQNHYYYTNKAMFVYKP 59
L P Q S G I RQ+H Y + YKP
Sbjct: 141 LTPSPQMYSSGGEEITPRQSHQSYHHMDSVEYKP 174
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 19.8 bits (39), Expect = 4.0
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 32 KQIKCYFRYWLINK 73
K ++C+F+Y IN+
Sbjct: 118 KILECFFKYKTINQ 131
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 19.0 bits (37), Expect = 6.9
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 213 GRGKVRLVPENQIFFTKSTNCSRKTNSDPDPELMVDRI 100
G G L P + K+ NCS T++ M DR+
Sbjct: 96 GNGGPLLAPYPDWTWAKNENCSGITSAYKIEIDMCDRL 133
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.6 bits (36), Expect = 9.2
Identities = 7/30 (23%), Positives = 13/30 (43%)
Frame = -2
Query: 142 NQFGSRSGINGRQNHYYYTNKAMFVYKPIP 53
N + + + N + YY N + P+P
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.6 bits (36), Expect = 9.2
Identities = 7/30 (23%), Positives = 13/30 (43%)
Frame = -2
Query: 142 NQFGSRSGINGRQNHYYYTNKAMFVYKPIP 53
N + + + N + YY N + P+P
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.6 bits (36), Expect = 9.2
Identities = 7/30 (23%), Positives = 13/30 (43%)
Frame = -2
Query: 142 NQFGSRSGINGRQNHYYYTNKAMFVYKPIP 53
N + + + N + YY N + P+P
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.6 bits (36), Expect = 9.2
Identities = 7/30 (23%), Positives = 13/30 (43%)
Frame = -2
Query: 142 NQFGSRSGINGRQNHYYYTNKAMFVYKPIP 53
N + + + N + YY N + P+P
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.6 bits (36), Expect = 9.2
Identities = 7/30 (23%), Positives = 13/30 (43%)
Frame = -2
Query: 142 NQFGSRSGINGRQNHYYYTNKAMFVYKPIP 53
N + + + N + YY N + P+P
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.6 bits (36), Expect = 9.2
Identities = 7/30 (23%), Positives = 13/30 (43%)
Frame = -2
Query: 142 NQFGSRSGINGRQNHYYYTNKAMFVYKPIP 53
N + + + N + YY N + P+P
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 18.6 bits (36), Expect = 9.2
Identities = 7/30 (23%), Positives = 13/30 (43%)
Frame = -2
Query: 142 NQFGSRSGINGRQNHYYYTNKAMFVYKPIP 53
N + + + N + YY N + P+P
Sbjct: 95 NNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +2
Query: 83 IGVIVVILSTINSGSGSELV 142
+G++ +I+ T+N G L+
Sbjct: 146 MGIVELIMFTVNKYVGEHLL 165
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 18.6 bits (36), Expect = 9.2
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -1
Query: 212 AGEKCAW 192
AGE+C W
Sbjct: 601 AGEQCCW 607
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,279
Number of Sequences: 438
Number of extensions: 1202
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3281070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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