Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15m01
(854 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 485 e-137
03_01_0034 + 318432-318825,318902-319851 483 e-136
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 483 e-136
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 483 e-136
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 482 e-136
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 482 e-136
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 481 e-136
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 475 e-134
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 235 4e-62
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 230 9e-61
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 230 1e-60
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 229 3e-60
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 133 1e-31
03_06_0181 - 32180321-32180491,32180849-32181010 29 3.6
02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117 29 3.6
08_02_1008 - 23508377-23508541,23508940-23509116 29 6.2
05_01_0120 - 828834-831143 29 6.2
03_06_0386 + 33555682-33556344,33557138-33557299 29 6.2
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 28 8.3
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 485 bits (1195), Expect = e-137
Identities = 219/252 (86%), Positives = 241/252 (95%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
MM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 314 RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 135
RGLKM+ATF+GN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 359 RGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
Query: 134 VSEYQQYQDATA 99
V+EYQQYQDATA
Sbjct: 419 VAEYQQYQDATA 430
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 483 bits (1190), Expect = e-136
Identities = 219/252 (86%), Positives = 240/252 (95%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
MM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCDIPP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPP 358
Query: 314 RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 135
GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 359 TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
Query: 134 VSEYQQYQDATA 99
VSEYQQYQDATA
Sbjct: 419 VSEYQQYQDATA 430
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 483 bits (1190), Expect = e-136
Identities = 218/252 (86%), Positives = 241/252 (95%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT
Sbjct: 200 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 259
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKN
Sbjct: 260 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 319
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
MM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP
Sbjct: 320 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 379
Query: 314 RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 135
RGL M++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 380 RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 439
Query: 134 VSEYQQYQDATA 99
VSEYQQYQDATA
Sbjct: 440 VSEYQQYQDATA 451
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 483 bits (1190), Expect = e-136
Identities = 218/252 (86%), Positives = 241/252 (95%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
MM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 314 RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 135
RGL M++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 359 RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
Query: 134 VSEYQQYQDATA 99
VSEYQQYQDATA
Sbjct: 419 VSEYQQYQDATA 430
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 482 bits (1189), Expect = e-136
Identities = 217/252 (86%), Positives = 241/252 (95%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT
Sbjct: 359 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 418
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKN
Sbjct: 419 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 478
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
MM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP
Sbjct: 479 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 538
Query: 314 RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 135
RGL M++TF+GN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 539 RGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 598
Query: 134 VSEYQQYQDATA 99
VSEYQQYQDATA
Sbjct: 599 VSEYQQYQDATA 610
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 482 bits (1188), Expect = e-136
Identities = 218/252 (86%), Positives = 240/252 (95%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
MM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 314 RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 135
GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 359 NGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
Query: 134 VSEYQQYQDATA 99
V+EYQQYQDATA
Sbjct: 419 VAEYQQYQDATA 430
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 481 bits (1185), Expect = e-136
Identities = 218/252 (86%), Positives = 240/252 (95%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKN
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
MM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 314 RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 135
GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 359 IGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
Query: 134 VSEYQQYQDATA 99
V+EYQQYQDATA
Sbjct: 419 VAEYQQYQDATA 430
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 475 bits (1170), Expect = e-134
Identities = 214/252 (84%), Positives = 238/252 (94%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLT P++GDLNHL+SATMSGVT
Sbjct: 195 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTC 254
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKN
Sbjct: 255 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 314
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
MM A DPRHGRYLT +A+FRGRMS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP
Sbjct: 315 MMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 374
Query: 314 RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 135
GL M++TF+GN+T+IQE+F+R+SEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDL
Sbjct: 375 VGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDL 434
Query: 134 VSEYQQYQDATA 99
V+EYQQYQDATA
Sbjct: 435 VAEYQQYQDATA 446
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 235 bits (574), Expect = 4e-62
Identities = 105/254 (41%), Positives = 159/254 (62%), Gaps = 8/254 (3%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
LRF G +N D+ + N+VP+PR+HF + +AP+ S + LSVPE+T +F+ +
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 314 --------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 159
++ + I N TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 158 AESNMNDLVSEYQQ 117
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 230 bits (563), Expect = 9e-61
Identities = 102/254 (40%), Positives = 159/254 (62%), Gaps = 8/254 (3%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT
Sbjct: 262 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 321
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
LRF G +N D+ + N+VP+PR+HF + +AP+ S + SVPE+T +F+ +
Sbjct: 322 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 381
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
+MA CDPRHG+Y+ ++RG + K+V+ + +I+ + + FV+W P K + PP
Sbjct: 382 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 441
Query: 314 RG--------LKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 159
++ + I N TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 442 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 501
Query: 158 AESNMNDLVSEYQQ 117
A ++ L +Y++
Sbjct: 502 AREDLAALEKDYEE 515
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 230 bits (562), Expect = 1e-60
Identities = 104/254 (40%), Positives = 157/254 (61%), Gaps = 8/254 (3%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
LRF G LN D+ + N+VP+PR+HF + +AP+ S + LSV E+T F+ +
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 314 --------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 159
++ + I N+T++ E+F RI +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 SVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 158 AESNMNDLVSEYQQ 117
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 229 bits (559), Expect = 3e-60
Identities = 104/254 (40%), Positives = 157/254 (61%), Gaps = 8/254 (3%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKN 495
LRF G LN D+ + N+VP+PR+HF + +AP+ S + LSV E+T F+ +
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
Query: 494 MMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 315
MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 314 --------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 159
++ + I N+T++ E+F RI +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 158 AESNMNDLVSEYQQ 117
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 133 bits (322), Expect = 1e-31
Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 10/255 (3%)
Frame = -1
Query: 854 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 675
VV+PYN+ L++ +L N D +DN AL I L L PT+ N LVS MS TT
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
Query: 674 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGSQQYRALSVPELTQQMFDAK 498
LR+PG +N DL L +++P PR HF M G+ PLT R R +V ++ +++ K
Sbjct: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
Query: 497 NMMAACDPRH-----GRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTA 333
N+M + R+ +Y+++ + +G + +V E + I+ + F+EW
Sbjct: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEW-------- 353
Query: 332 VCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTG----EGMDEMEF 165
P +++S + N T+I+ LF + Q+ + +++AFL Y E D EF
Sbjct: 354 ----GPASIQVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEF 409
Query: 164 TEAESNMNDLVSEYQ 120
E+ + LV EY+
Sbjct: 410 DESREIIESLVDEYK 424
>03_06_0181 - 32180321-32180491,32180849-32181010
Length = 110
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 449 RRSDIYHGEGHRQPSCSWHQTFAASAPAQIE 541
R+ ++HGEG R+ S + +Q+F +SA Q++
Sbjct: 20 RQLQLFHGEGLRRLSPASYQSFCSSACGQVD 50
>02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117
Length = 386
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 559 PREVNGAKPGIKKCNLGNGTMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPYVG-- 732
PR N +PG+ + + NG F + + PG R V+ P +V + SP G
Sbjct: 192 PRRTNSVRPGVAENLVKNG-----DFEEGPYIIPGTRWGVLIPSMVVDE---HSPLPGWM 243
Query: 733 VVSFKVLKQI 762
V S K +K I
Sbjct: 244 VESLKAVKYI 253
>08_02_1008 - 23508377-23508541,23508940-23509116
Length = 113
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 180 HTLPRVPVQESFSSEHGCKLFRNSFKQLLDSCGV 281
H + RV +E S+ GC + + +LD CGV
Sbjct: 51 HDIERVRNKEQLSTRVGCGRVHSIIENILDKCGV 84
>05_01_0120 - 828834-831143
Length = 769
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 626 PLVSANRRSVVLGIASTWSHQTLSLKPNGSSPHTLGLLASKS 751
P +S + S I+S +S + SL P+ SSP +LGL + S
Sbjct: 502 PFLSPSSLSSDSSISSKYSSDSPSLSPSTSSPTSLGLSPASS 543
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 616 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPY 726
T +F K+ F C +TPD +TK+ KSP+
Sbjct: 213 TKTLGNFVKATFDCLMKTYGFLTPDFWRDTKFVKSPF 249
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +1
Query: 394 LSICSSTSFIDIRPRKTAA--TVRYLPWRGSQAAIMFLASNICCVSSGTDRARYCWLPRE 567
LS SF+ ++P + ++PW S++C V+ G+D A W ++
Sbjct: 332 LSGQKKVSFLPVKPHTKGIINNINFMPW-----------SDVCFVTGGSDHAVILWQEKD 380
Query: 568 VNGAKPGIKKCNLGNGTMLTASF-RKSAFSCPGNRKHVVTPDIVA 699
+ + K + M A +KS G+ K +++ D+ A
Sbjct: 381 DSWNHKKVHKDLHSSAVMGVAGLQQKSTILSVGSDKRIISFDLAA 425
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,431,317
Number of Sequences: 37544
Number of extensions: 555059
Number of successful extensions: 1471
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1466
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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