Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15l24
         (706 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457026-1|CAG33307.1|  492|Homo sapiens FRS3 protein.                 30   7.0  
BC010611-1|AAH10611.1|  492|Homo sapiens fibroblast growth facto...    30   7.0  
AL365205-4|CAI13183.1|  492|Homo sapiens fibroblast growth facto...    30   7.0  
AF036718-1|AAB92555.1|  492|Homo sapiens FGFR signalling adaptor...    30   7.0  
BC112396-1|AAI12397.1|  852|Homo sapiens zinc finger protein 484...    30   9.3  
BC112394-1|AAI12395.1|  852|Homo sapiens zinc finger protein 484...    30   9.3  
AL136981-5|CAI41018.1|  852|Homo sapiens zinc finger protein 484...    30   9.3  
AL136981-4|CAI41017.1|  816|Homo sapiens zinc finger protein 484...    30   9.3  

>CR457026-1|CAG33307.1|  492|Homo sapiens FRS3 protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 246 TFSESAIRHEGSWKTPPSRRRCPPRHFIFNY 338
           T + +AIR  GS+  P +RRR  PR F F++
Sbjct: 374 TSTRAAIRSHGSFPVPLTRRRGSPRVFNFDF 404


>BC010611-1|AAH10611.1|  492|Homo sapiens fibroblast growth factor
           receptor substrate 3 protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 246 TFSESAIRHEGSWKTPPSRRRCPPRHFIFNY 338
           T + +AIR  GS+  P +RRR  PR F F++
Sbjct: 374 TSTRAAIRSHGSFPVPLTRRRGSPRVFNFDF 404


>AL365205-4|CAI13183.1|  492|Homo sapiens fibroblast growth factor
           receptor substrate 3 protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 246 TFSESAIRHEGSWKTPPSRRRCPPRHFIFNY 338
           T + +AIR  GS+  P +RRR  PR F F++
Sbjct: 374 TSTRAAIRSHGSFPVPLTRRRGSPRVFNFDF 404


>AF036718-1|AAB92555.1|  492|Homo sapiens FGFR signalling adaptor
           SNT-2 protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 246 TFSESAIRHEGSWKTPPSRRRCPPRHFIFNY 338
           T + +AIR  GS+  P +RRR  PR F F++
Sbjct: 374 TSTRAAIRSHGSFPVPLTRRRGSPRVFNFDF 404


>BC112396-1|AAI12397.1|  852|Homo sapiens zinc finger protein 484,
           isoform a protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 506 IISRSQIYLFSDYLRAFSSKIH 571
           I +R  +YLFSDY+  FS K H
Sbjct: 244 IHTRESLYLFSDYVNVFSPKSH 265


>BC112394-1|AAI12395.1|  852|Homo sapiens zinc finger protein 484
           protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 506 IISRSQIYLFSDYLRAFSSKIH 571
           I +R  +YLFSDY+  FS K H
Sbjct: 244 IHTRESLYLFSDYVNVFSPKSH 265


>AL136981-5|CAI41018.1|  852|Homo sapiens zinc finger protein 484
           protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 506 IISRSQIYLFSDYLRAFSSKIH 571
           I +R  +YLFSDY+  FS K H
Sbjct: 244 IHTRESLYLFSDYVNVFSPKSH 265


>AL136981-4|CAI41017.1|  816|Homo sapiens zinc finger protein 484
           protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 506 IISRSQIYLFSDYLRAFSSKIH 571
           I +R  +YLFSDY+  FS K H
Sbjct: 208 IHTRESLYLFSDYVNVFSPKSH 229


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,953,943
Number of Sequences: 237096
Number of extensions: 1706479
Number of successful extensions: 2873
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2873
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)