Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15l13
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein pr... 86 1e-16
AL833875-1|CAD38732.1| 801|Homo sapiens hypothetical protein pr... 84 6e-16
AB039667-1|BAA92353.1| 1453|Homo sapiens DNA mismatch repair pro... 84 6e-16
L40399-1|AAC42005.1| 265|Homo sapiens protein ( Homo sapiens (c... 80 1e-14
BC112167-1|AAI12168.1| 1429|Homo sapiens mutL homolog 3 (E. coli... 69 2e-11
BC036866-1|AAH36866.1| 335|Homo sapiens MLH3 protein protein. 69 2e-11
AY963685-1|AAX59030.1| 1429|Homo sapiens mutL 3 homolog (E.coli)... 69 2e-11
AF195658-1|AAF23905.1| 1429|Homo sapiens DNA mismatch repair pro... 69 2e-11
AF195657-1|AAF23904.1| 1429|Homo sapiens DNA mismatch repair pro... 69 2e-11
U14658-1|AAA50390.1| 862|Homo sapiens hPMS2 protein. 41 0.004
U13696-1|AAA63923.1| 862|Homo sapiens hPMS2 protein. 41 0.004
BC093921-1|AAH93921.1| 862|Homo sapiens PMS2 postmeiotic segreg... 41 0.004
BC041364-1|AAH41364.1| 191|Homo sapiens PMS2CL protein protein. 41 0.004
BC031832-1|AAH31832.1| 879|Homo sapiens PMS2 protein protein. 41 0.004
AC005995-3|AAS00390.1| 862|Homo sapiens unknown protein. 41 0.004
AB116525-1|BAC81643.1| 191|Homo sapiens PMS2-C terminal -like p... 41 0.004
AB103086-1|BAD89429.1| 756|Homo sapiens postmeiotic segregation... 41 0.004
AB103083-1|BAD89426.1| 461|Homo sapiens postmeiotic segregation... 41 0.004
>AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein
protein.
Length = 391
Score = 86.2 bits (204), Expect = 1e-16
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Frame = -3
Query: 787 VLFDQHAVDERIRLEKNLSEYLQKQQW-----KKVN----IDDVHLTLNKDEILYLHNYK 635
VL DQHA ERIRLE+ + + +KQQ KK+ I + +T+ +++ L Y
Sbjct: 166 VLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYH 225
Query: 634 DKLSRLGIEWNI--LGNDQIILSSVPQSILGKIPRQMXXXXXXXXXXXXXXXXXXKQQSG 461
L LG+E+ + +++ VP L + R+ + G
Sbjct: 226 KNLEDLGLEFVFPDTSDSLVLVGKVP---LCFVEREANELRRGRSTVTKSIVELLQTTGG 282
Query: 460 CISLYPKAIMDLVFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVMAVLI 281
P + ++ S+AC AIKF D LS+ + ++ ALS C++PFQCAHGRP M L
Sbjct: 283 IQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLA 342
Query: 280 DV--VKNNNEYKINLSKLKE 227
D+ ++ + K NL+KL++
Sbjct: 343 DIDHLEQEKQIKPNLTKLRK 362
>AL833875-1|CAD38732.1| 801|Homo sapiens hypothetical protein
protein.
Length = 801
Score = 83.8 bits (198), Expect = 6e-16
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Frame = -3
Query: 787 VLFDQHAVDERIRLEKNLSEYLQKQQW-----KKVN----IDDVHLTLNKDEILYLHNYK 635
VL DQHA ERIRLE+ + + +KQQ KK+ I + +T+ +++ L Y
Sbjct: 568 VLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYH 627
Query: 634 DKLSRLGIEWNI--LGNDQIILSSVPQSIL----GKIPRQMXXXXXXXXXXXXXXXXXXK 473
L LG+E+ + +++ VP + ++ R
Sbjct: 628 KNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLELL 687
Query: 472 QQSGCIS-LYPKAIMDLVFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPV 296
Q +G I P + ++ S+AC AIKF D LS+ + ++ ALS C++PFQCAHGRP
Sbjct: 688 QTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPS 747
Query: 295 MAVLIDV--VKNNNEYKINLSKLKE 227
M L D+ ++ + K NL+KL++
Sbjct: 748 MLPLADIDHLEQEKQIKPNLTKLRK 772
>AB039667-1|BAA92353.1| 1453|Homo sapiens DNA mismatch repair protein
MLH3 protein.
Length = 1453
Score = 83.8 bits (198), Expect = 6e-16
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Frame = -3
Query: 787 VLFDQHAVDERIRLEKNLSEYLQKQQW-----KKVN----IDDVHLTLNKDEILYLHNYK 635
VL DQHA ERIRLE+ + + +KQQ KK+ I + +T+ +++ L Y
Sbjct: 1220 VLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYH 1279
Query: 634 DKLSRLGIEWNI--LGNDQIILSSVPQSIL----GKIPRQMXXXXXXXXXXXXXXXXXXK 473
L LG+E+ + +++ VP + ++ R
Sbjct: 1280 KNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLELL 1339
Query: 472 QQSGCIS-LYPKAIMDLVFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPV 296
Q +G I P + ++ S+AC AIKF D LS+ + ++ ALS C++PFQCAHGRP
Sbjct: 1340 QTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPS 1399
Query: 295 MAVLIDV--VKNNNEYKINLSKLKE 227
M L D+ ++ + K NL+KL++
Sbjct: 1400 MLPLADIDHLEQEKQIKPNLTKLRK 1424
>L40399-1|AAC42005.1| 265|Homo sapiens protein ( Homo sapiens
(clone S240ii117/zap112) mRNA, complete cds. ).
Length = 265
Score = 79.8 bits (188), Expect = 1e-14
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Frame = -3
Query: 787 VLFDQHAVDERIRLEKNLSEYLQKQQW-----KKVN----IDDVHLTLNKDEILYLHNYK 635
VL QHA ER RLE+ + + +KQQ KK+ I + +T+ +++ L Y
Sbjct: 32 VLVXQHAAHERXRLEQXIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYH 91
Query: 634 DKLSRLGIEWNI--LGNDQIILSSVPQSIL----GKIPRQMXXXXXXXXXXXXXXXXXXK 473
L LG+E+ + +++ VP + ++ R
Sbjct: 92 KNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLELL 151
Query: 472 QQSGCIS-LYPKAIMDLVFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPV 296
Q +G I P + ++ S+AC AIKF D LS+ + ++ ALS C++PFQCAHGRP
Sbjct: 152 QTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPS 211
Query: 295 MAVLIDV--VKNNNEYKINLSKLKE 227
M L D+ ++ + K NL+KL++
Sbjct: 212 MLPLADIDHLEQEKQIKPNLTKLRK 236
>BC112167-1|AAI12168.1| 1429|Homo sapiens mutL homolog 3 (E. coli)
protein.
Length = 1429
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = -3
Query: 445 PKAIMDLVFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVMAVLIDV--V 272
P + ++ S+AC AIKF D LS+ + ++ ALS C++PFQCAHGRP M L D+ +
Sbjct: 1326 PLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADIDHL 1385
Query: 271 KNNNEYKINLSKLKE 227
+ + K NL+KL++
Sbjct: 1386 EQEKQIKPNLTKLRK 1400
>BC036866-1|AAH36866.1| 335|Homo sapiens MLH3 protein protein.
Length = 335
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = -3
Query: 445 PKAIMDLVFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVMAVLIDV--V 272
P + ++ S+AC AIKF D LS+ + ++ ALS C++PFQCAHGRP M L D+ +
Sbjct: 232 PLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADIDHL 291
Query: 271 KNNNEYKINLSKLKE 227
+ + K NL+KL++
Sbjct: 292 EQEKQIKPNLTKLRK 306
>AY963685-1|AAX59030.1| 1429|Homo sapiens mutL 3 homolog (E.coli)
protein.
Length = 1429
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = -3
Query: 445 PKAIMDLVFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVMAVLIDV--V 272
P + ++ S+AC AIKF D LS+ + ++ ALS C++PFQCAHGRP M L D+ +
Sbjct: 1326 PLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADIDHL 1385
Query: 271 KNNNEYKINLSKLKE 227
+ + K NL+KL++
Sbjct: 1386 EQEKQIKPNLTKLRK 1400
>AF195658-1|AAF23905.1| 1429|Homo sapiens DNA mismatch repair protein
protein.
Length = 1429
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = -3
Query: 445 PKAIMDLVFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVMAVLIDV--V 272
P + ++ S+AC AIKF D LS+ + ++ ALS C++PFQCAHGRP M L D+ +
Sbjct: 1326 PLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADIDHL 1385
Query: 271 KNNNEYKINLSKLKE 227
+ + K NL+KL++
Sbjct: 1386 EQEKQIKPNLTKLRK 1400
>AF195657-1|AAF23904.1| 1429|Homo sapiens DNA mismatch repair protein
protein.
Length = 1429
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = -3
Query: 445 PKAIMDLVFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVMAVLIDV--V 272
P + ++ S+AC AIKF D LS+ + ++ ALS C++PFQCAHGRP M L D+ +
Sbjct: 1326 PLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADIDHL 1385
Query: 271 KNNNEYKINLSKLKE 227
+ + K NL+KL++
Sbjct: 1386 EQEKQIKPNLTKLRK 1400
>U14658-1|AAA50390.1| 862|Homo sapiens hPMS2 protein.
Length = 862
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/164 (21%), Positives = 63/164 (38%)
Frame = -3
Query: 784 LFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKDKLSRLGIEW 605
+ DQHA DE+ E L ++ Q + + ++LT + +L + L I +
Sbjct: 697 IVDQHATDEKYNFEM-LQQHTVLQGQRLIAPQTLNLTAVNEAVL--------IENLEI-F 746
Query: 604 NILGNDQIILSSVPQSILGKIPRQMXXXXXXXXXXXXXXXXXXKQQSGCISLYPKAIMDL 425
G D +I + P + K+ S + P + +
Sbjct: 747 RKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMCRPSRVKQM 806
Query: 424 VFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVM 293
S ACR ++ G L+ + + ++ + E P+ C HGRP M
Sbjct: 807 FASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTM 850
>U13696-1|AAA63923.1| 862|Homo sapiens hPMS2 protein.
Length = 862
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/164 (21%), Positives = 63/164 (38%)
Frame = -3
Query: 784 LFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKDKLSRLGIEW 605
+ DQHA DE+ E L ++ Q + + ++LT + +L + L I +
Sbjct: 697 IVDQHATDEKYNFEM-LQQHTVLQGQRLIAPQTLNLTAVNEAVL--------IENLEI-F 746
Query: 604 NILGNDQIILSSVPQSILGKIPRQMXXXXXXXXXXXXXXXXXXKQQSGCISLYPKAIMDL 425
G D +I + P + K+ S + P + +
Sbjct: 747 RKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMCRPSRVKQM 806
Query: 424 VFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVM 293
S ACR ++ G L+ + + ++ + E P+ C HGRP M
Sbjct: 807 FASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTM 850
>BC093921-1|AAH93921.1| 862|Homo sapiens PMS2 postmeiotic segregation
increased 2 (S. cerevisiae) protein.
Length = 862
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/164 (21%), Positives = 63/164 (38%)
Frame = -3
Query: 784 LFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKDKLSRLGIEW 605
+ DQHA DE+ E L ++ Q + + ++LT + +L + L I +
Sbjct: 697 IVDQHATDEKYNFEM-LQQHTVLQGQRLIAPQTLNLTAVNEAVL--------IENLEI-F 746
Query: 604 NILGNDQIILSSVPQSILGKIPRQMXXXXXXXXXXXXXXXXXXKQQSGCISLYPKAIMDL 425
G D +I + P + K+ S + P + +
Sbjct: 747 RKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMCRPSRVKQM 806
Query: 424 VFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVM 293
S ACR ++ G L+ + + ++ + E P+ C HGRP M
Sbjct: 807 FASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTM 850
>BC041364-1|AAH41364.1| 191|Homo sapiens PMS2CL protein protein.
Length = 191
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/164 (21%), Positives = 63/164 (38%)
Frame = -3
Query: 784 LFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKDKLSRLGIEW 605
+ DQHA DE+ E L ++ Q + + ++LT + +L + L I +
Sbjct: 26 IVDQHATDEKYNFEM-LQQHTVLQGQRLIAPQTLNLTAVNEAVL--------IENLEI-F 75
Query: 604 NILGNDQIILSSVPQSILGKIPRQMXXXXXXXXXXXXXXXXXXKQQSGCISLYPKAIMDL 425
G D +I + P + K+ S + P + +
Sbjct: 76 RKNGFDFVIDENAPVTERAKLISLPTSKSWTFGPQDVDELIFMLSDSPGVMCRPSRVKQM 135
Query: 424 VFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVM 293
S ACR ++ G L+ + + ++ + E P+ C HGRP M
Sbjct: 136 FASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTM 179
>BC031832-1|AAH31832.1| 879|Homo sapiens PMS2 protein protein.
Length = 879
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/164 (21%), Positives = 63/164 (38%)
Frame = -3
Query: 784 LFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKDKLSRLGIEW 605
+ DQHA DE+ E L ++ Q + + ++LT + +L + L I +
Sbjct: 714 IVDQHATDEKYNFEM-LQQHTVLQGQRLIAPQTLNLTAVNEAVL--------IENLEI-F 763
Query: 604 NILGNDQIILSSVPQSILGKIPRQMXXXXXXXXXXXXXXXXXXKQQSGCISLYPKAIMDL 425
G D +I + P + K+ S + P + +
Sbjct: 764 RKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMCRPSRVKQM 823
Query: 424 VFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVM 293
S ACR ++ G L+ + + ++ + E P+ C HGRP M
Sbjct: 824 FASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTM 867
>AC005995-3|AAS00390.1| 862|Homo sapiens unknown protein.
Length = 862
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/164 (21%), Positives = 63/164 (38%)
Frame = -3
Query: 784 LFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKDKLSRLGIEW 605
+ DQHA DE+ E L ++ Q + + ++LT + +L + L I +
Sbjct: 697 IVDQHATDEKYNFEM-LQQHTVLQGQRLIAPQTLNLTAVNEAVL--------IENLEI-F 746
Query: 604 NILGNDQIILSSVPQSILGKIPRQMXXXXXXXXXXXXXXXXXXKQQSGCISLYPKAIMDL 425
G D +I + P + K+ S + P + +
Sbjct: 747 RKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMCRPSRVKQM 806
Query: 424 VFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVM 293
S ACR ++ G L+ + + ++ + E P+ C HGRP M
Sbjct: 807 FASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTM 850
>AB116525-1|BAC81643.1| 191|Homo sapiens PMS2-C terminal -like
protein.
Length = 191
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/164 (21%), Positives = 63/164 (38%)
Frame = -3
Query: 784 LFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKDKLSRLGIEW 605
+ DQHA DE+ E L ++ Q + + ++LT + +L + L I +
Sbjct: 26 IVDQHATDEKYNFEM-LQQHTVLQGQRLIAPQTLNLTAVNEAVL--------IENLEI-F 75
Query: 604 NILGNDQIILSSVPQSILGKIPRQMXXXXXXXXXXXXXXXXXXKQQSGCISLYPKAIMDL 425
G D +I + P + K+ S + P + +
Sbjct: 76 RKNGFDFVIDENAPVTERAKLISLPTSKSWTFGPQDVDELIFMLSDSPGVMCRPSRVKQM 135
Query: 424 VFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVM 293
S ACR ++ G L+ + + ++ + E P+ C HGRP M
Sbjct: 136 FASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTM 179
>AB103086-1|BAD89429.1| 756|Homo sapiens postmeiotic segregation
increased 2 nirs variant 5 protein.
Length = 756
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/164 (21%), Positives = 63/164 (38%)
Frame = -3
Query: 784 LFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKDKLSRLGIEW 605
+ DQHA DE+ E L ++ Q + + ++LT + +L + L I +
Sbjct: 591 IVDQHATDEKYNFEM-LQQHTVLQGQRLIAPQTLNLTAVNEAVL--------IENLEI-F 640
Query: 604 NILGNDQIILSSVPQSILGKIPRQMXXXXXXXXXXXXXXXXXXKQQSGCISLYPKAIMDL 425
G D +I + P + K+ S + P + +
Sbjct: 641 RKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMCRPSRVKQM 700
Query: 424 VFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVM 293
S ACR ++ G L+ + + ++ + E P+ C HGRP M
Sbjct: 701 FASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTM 744
>AB103083-1|BAD89426.1| 461|Homo sapiens postmeiotic segregation
increased 2 nirs variant 2 protein.
Length = 461
Score = 41.1 bits (92), Expect = 0.004
Identities = 35/164 (21%), Positives = 63/164 (38%)
Frame = -3
Query: 784 LFDQHAVDERIRLEKNLSEYLQKQQWKKVNIDDVHLTLNKDEILYLHNYKDKLSRLGIEW 605
+ DQHA DE+ E L ++ Q + + ++LT + +L + L I +
Sbjct: 296 IVDQHATDEKYNFEM-LQQHTVLQGQRLIAPQTLNLTAVNEAVL--------IENLEI-F 345
Query: 604 NILGNDQIILSSVPQSILGKIPRQMXXXXXXXXXXXXXXXXXXKQQSGCISLYPKAIMDL 425
G D +I + P + K+ S + P + +
Sbjct: 346 RKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPGVMCRPSRVKQM 405
Query: 424 VFSEACRYAIKFGDKLSMGQCEDMLNALSECKMPFQCAHGRPVM 293
S ACR ++ G L+ + + ++ + E P+ C HGRP M
Sbjct: 406 FASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTM 449
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,268,015
Number of Sequences: 237096
Number of extensions: 2152109
Number of successful extensions: 3599
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3595
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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