Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15l11
(791 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 41 0.006
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 41 0.006
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 40 0.014
AL359181-1|CAI96111.1| 1096|Homo sapiens PHD finger protein 2 pr... 36 0.13
AL353629-9|CAI96110.1| 1096|Homo sapiens PHD finger protein 2 pr... 36 0.13
BC028051-1|AAH28051.2| 469|Homo sapiens PHF2 protein protein. 36 0.22
AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32 pro... 34 0.51
BC092423-1|AAH92423.1| 471|Homo sapiens zinc finger protein 533... 34 0.68
AK131432-1|BAD18578.1| 421|Homo sapiens protein ( Homo sapiens ... 34 0.68
BC064613-1|AAH64613.1| 332|Homo sapiens PHF2 protein protein. 33 1.2
BC053634-1|AAH53634.1| 233|Homo sapiens THAP domain containing ... 33 1.2
AB014562-1|BAA31637.2| 1114|Homo sapiens KIAA0662 protein protein. 33 1.2
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 32 2.1
U77968-1|AAB47248.1| 590|Homo sapiens neuronal PAS1 protein. 32 2.7
BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein. 32 2.7
AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein ... 32 2.7
AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein. 32 2.7
AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein. 32 2.7
BC103913-1|AAI03914.1| 546|Homo sapiens transcription elongatio... 31 3.6
BC103912-1|AAI03913.1| 544|Homo sapiens TCEB3C protein protein. 31 3.6
AB076840-1|BAC01113.1| 546|Homo sapiens transcription elongatio... 31 3.6
M22406-1|AAA36335.1| 76|Homo sapiens protein ( Human intestina... 31 4.8
AM709890-1|CAM97225.1| 639|Homo sapiens platelet glycoprotein I... 31 4.8
AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein. 31 4.8
AF135960-1|AAF62352.3| 1256|Homo sapiens latent transforming gro... 31 4.8
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 31 6.3
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 31 6.3
X81649-1|CAA57309.1| 850|Homo sapiens gastric mucin protein. 30 8.3
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 30 8.3
AF329268-1|AAO13348.1| 404|Homo sapiens SH3-domain kinase bindi... 30 8.3
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 40.7 bits (91), Expect = 0.006
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -3
Query: 210 TKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLPVP 49
T P+PP TPSP + T + S T TT PP+ P T T+ P+P
Sbjct: 772 TTPSPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLP 825
Score = 33.9 bits (74), Expect = 0.68
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -3
Query: 231 SSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKG--PPSKRPFSTFTVTSL 58
S T T P+P P ++M TL + + TP PP+ PFST T T+
Sbjct: 1097 SPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSPFSTTTPTTP 1156
Query: 57 PVP 49
VP
Sbjct: 1157 CVP 1159
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 210 TKPAPPKITP-SPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLP 55
T P+PP TP +P +S TL + S T TT PP+ P T T P
Sbjct: 912 TTPSPPTTTPITPPTSTTTLPPTTT-PSPPPTTTTTPPPTTTPSPPTTTTPSP 963
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 210 TKPAPPKITP-SPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLP 55
T P+PP TP +P +S TL + S T TT PP+ P T T P
Sbjct: 991 TTPSPPTTTPITPPTSTTTLPPTTT-PSPPPTTTTTPPPTTTPSPPTTTTPSP 1042
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -3
Query: 210 TKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLPVP 49
T PP TPSP ++ T + S T TT P+ P + T+ P P
Sbjct: 788 TTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPP 841
Score = 30.3 bits (65), Expect = 8.3
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 231 SSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNET-------PTTKGPPSKRPFSTF 73
++ S T P+PP TPSP ++ T + S T TT PP+ P
Sbjct: 843 TTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPT 902
Query: 72 TVTSLPVP 49
T T+ P P
Sbjct: 903 TTTTTPPP 910
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 40.7 bits (91), Expect = 0.006
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -3
Query: 210 TKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLPVP 49
T P+PP TPSP + T + S T TT PP+ P T T+ P+P
Sbjct: 1397 TTPSPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLP 1450
Score = 33.9 bits (74), Expect = 0.68
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -3
Query: 231 SSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKG--PPSKRPFSTFTVTSL 58
S T T P+P P ++M TL + + TP PP+ PFST T T+
Sbjct: 1722 SPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSPFSTTTPTTP 1781
Query: 57 PVP 49
VP
Sbjct: 1782 CVP 1784
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 210 TKPAPPKITP-SPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLP 55
T P+PP TP +P +S TL + S T TT PP+ P T T P
Sbjct: 1537 TTPSPPTTTPITPPTSTTTLPPTTT-PSPPPTTTTTPPPTTTPSPPTTTTPSP 1588
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 210 TKPAPPKITP-SPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLP 55
T P+PP TP +P +S TL + S T TT PP+ P T T P
Sbjct: 1616 TTPSPPTTTPITPPTSTTTLPPTTT-PSPPPTTTTTPPPTTTPSPPTTTTPSP 1667
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -3
Query: 210 TKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLPVP 49
T PP TPSP ++ T + S T TT P+ P + T+ P P
Sbjct: 1413 TTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPP 1466
Score = 30.3 bits (65), Expect = 8.3
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -3
Query: 231 SSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNET-------PTTKGPPSKRPFSTF 73
++ S T P+PP TPSP ++ T + S T TT PP+ P
Sbjct: 1468 TTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPT 1527
Query: 72 TVTSLPVP 49
T T+ P P
Sbjct: 1528 TTTTTPPP 1535
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 39.5 bits (88), Expect = 0.014
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -3
Query: 210 TKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLPVP 49
T P+PP TPSP + T + S T TT PP+ P T T+ P P
Sbjct: 55 TTPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPP 108
Score = 34.3 bits (75), Expect = 0.51
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -3
Query: 210 TKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLPVP 49
T PP TPSP ++ T + S T TT PP+ P + T+ P P
Sbjct: 71 TTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPP 124
Score = 33.9 bits (74), Expect = 0.68
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -3
Query: 231 SSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKG--PPSKRPFSTFTVTSL 58
S T T P+P P ++M TL + + TP PP+ PFST T T+
Sbjct: 380 SPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSPFSTTTPTTP 439
Query: 57 PVP 49
VP
Sbjct: 440 CVP 442
Score = 31.9 bits (69), Expect = 2.7
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = -3
Query: 219 TKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLPVP 49
T T P PP TPSP S T T+ + TT PP+ P T T+ P P
Sbjct: 101 TTTTTP-PPTTTPSPPISTTTTPPPT--TTPSPPTTTPSPPTTTPSPPTTTTTTPPP 154
Score = 31.5 bits (68), Expect = 3.6
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Frame = -3
Query: 231 SSKSTKETKPAPPKITPSPCSSMQTLQKANSC----TSCNETP---TTKGPPSKRPFSTF 73
++ S T P+PP TPSP ++ T + T+ TP TT PP+ P
Sbjct: 126 TTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPT 185
Query: 72 TVTSLPVP 49
T T+ P P
Sbjct: 186 TTTTTPPP 193
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 210 TKPAPPKITP-SPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLP 55
T P+PP TP +P +S TL + S T TT PP+ P T T P
Sbjct: 195 TTPSPPTTTPITPPTSTTTLPPTTT-PSPPPTTTTTPPPTTTPSPPTTTTPSP 246
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 210 TKPAPPKITP-SPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLP 55
T P+PP TP +P +S TL + S T TT PP+ P T T P
Sbjct: 274 TTPSPPTTTPITPPTSTTTLPPTTT-PSPPPTTTTTPPPTTTPSPPTTTTPSP 325
Score = 30.3 bits (65), Expect = 8.3
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = -3
Query: 228 SKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLP 55
S T T PP TPSP + T + S + TT PP+ P T S P
Sbjct: 81 SPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPP 138
>AL359181-1|CAI96111.1| 1096|Homo sapiens PHD finger protein 2
protein.
Length = 1096
Score = 36.3 bits (80), Expect = 0.13
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 249 AKGHNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFT 70
AK + + +K+ K A K+TP+ S + + TS + TP + P S P ST T
Sbjct: 939 AKLSQQEEQKSKKKKSAKRKLTPNTTSPSTSTSISAGTTSTSTTPASTTPASTTPASTST 998
Query: 69 VTS 61
+S
Sbjct: 999 ASS 1001
>AL353629-9|CAI96110.1| 1096|Homo sapiens PHD finger protein 2
protein.
Length = 1096
Score = 36.3 bits (80), Expect = 0.13
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 249 AKGHNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFT 70
AK + + +K+ K A K+TP+ S + + TS + TP + P S P ST T
Sbjct: 939 AKLSQQEEQKSKKKKSAKRKLTPNTTSPSTSTSISAGTTSTSTTPASTTPASTTPASTST 998
Query: 69 VTS 61
+S
Sbjct: 999 ASS 1001
>BC028051-1|AAH28051.2| 469|Homo sapiens PHF2 protein protein.
Length = 469
Score = 35.5 bits (78), Expect = 0.22
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -3
Query: 249 AKGHNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFT 70
AK + + +K+ K A K+TP+ S + + TS + TP + P S P ST
Sbjct: 358 AKLSQQEEQKSKKKKSAKRKLTPNTTSPSTSTSISAGTTSTSTTPASTTPASTTPASTTP 417
Query: 69 VTSLP 55
S P
Sbjct: 418 ALSTP 422
>AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32
protein.
Length = 559
Score = 34.3 bits (75), Expect = 0.51
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -3
Query: 261 IHPGAKGHNESSKSTKETKPAPPKITPSPCSSMQTLQKA--NSCTSCNETPTTKGPPSKR 88
+HPGA + + +P P ++P+P S L A +S S P+ PP +R
Sbjct: 38 LHPGADATHPPPPARSPRRPGAPSLSPAPRSGELGLPGAPESSTASAPGEPSPPSPPCRR 97
Query: 87 P 85
P
Sbjct: 98 P 98
>BC092423-1|AAH92423.1| 471|Homo sapiens zinc finger protein 533
protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.68
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = -3
Query: 261 IHPGAKGHNESSKSTKETKPAPP-KITPSPCSSMQTLQKANSCTSCNETPTTKGPPSK-- 91
+H K H + K + +P PP + +PS SS + + + TPT PS
Sbjct: 51 VHSNGKSHRKRVKQLSDGQPPPPAQASPSSNSSTGSTCHTTTLPALVRTPTLMMQPSLDI 110
Query: 90 RPFSTFTVTS 61
+PF +F V S
Sbjct: 111 KPFMSFPVDS 120
>AK131432-1|BAD18578.1| 421|Homo sapiens protein ( Homo sapiens
cDNA FLJ16557 fis, clone SYNOV2021953, moderately
similar to Mus musculus zinc finger protein 385
(Zfp385). ).
Length = 421
Score = 33.9 bits (74), Expect = 0.68
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = -3
Query: 261 IHPGAKGHNESSKSTKETKPAPP-KITPSPCSSMQTLQKANSCTSCNETPTTKGPPSK-- 91
+H K H + K + +P PP + +PS SS + + + TPT PS
Sbjct: 66 VHSNGKSHRKRVKQLSDGQPPPPAQASPSSNSSTGSTCHTTTLPALVRTPTLMMQPSLDI 125
Query: 90 RPFSTFTVTS 61
+PF +F V S
Sbjct: 126 KPFMSFPVDS 135
>BC064613-1|AAH64613.1| 332|Homo sapiens PHF2 protein protein.
Length = 332
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 249 AKGHNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFST 76
AK + + +K+ K A K+TP+ S + + TS + TP + P S P ST
Sbjct: 170 AKLSQQEEQKSKKKKSAKRKLTPNTTSPSTSTSISAGTTSTSTTPASTTPASTTPAST 227
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -3
Query: 225 KSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTS 61
K + + K P +PS +S+ + S T + TP + P S P ST T +S
Sbjct: 183 KKSAKRKLTPNTTSPSTSTSISAGTTSTSTTPASTTPASTTPASTTPASTSTASS 237
>BC053634-1|AAH53634.1| 233|Homo sapiens THAP domain containing 5
protein.
Length = 233
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 429 GAFLTCFSLVRREGWSEESNGGRSV-MSLE-EEVIVTSTRTLSAPGGTCNSMLPAL*VES 602
G F TCF + + ++ S+ SLE +EV+ +T L+ P T NSM E+
Sbjct: 29 GGFHTCFENLNSTTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQEN 88
Query: 603 AFLF*SIRDTI 635
FLF +I T+
Sbjct: 89 PFLFSTINQTV 99
>AB014562-1|BAA31637.2| 1114|Homo sapiens KIAA0662 protein protein.
Length = 1114
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 249 AKGHNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFST 76
AK + + +K+ K A K+TP+ S + + TS + TP + P S P ST
Sbjct: 952 AKLSQQEEQKSKKKKSAKRKLTPNTTSPSTSTSISAGTTSTSTTPASTTPASTTPAST 1009
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -3
Query: 225 KSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTS 61
K + + K P +PS +S+ + S T + TP + P S P ST T +S
Sbjct: 965 KKSAKRKLTPNTTSPSTSTSISAGTTSTSTTPASTTPASTTPASTTPASTSTASS 1019
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 255 PGAKGHNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGP-PSKRPFS 79
P A + +S P P T S ++ T +S TS T TT GP + RP
Sbjct: 1 PSAPTTSTTSGPGTTPSPVPTTSTTSAPTTRTTSAPKSSTTSAATTSTTSGPETTPRPVP 60
Query: 78 TFTVTSLP 55
T + TS P
Sbjct: 61 TTSTTSSP 68
>U77968-1|AAB47248.1| 590|Homo sapiens neuronal PAS1 protein.
Length = 590
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = -3
Query: 264 WIHPGAKGHNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPS 94
+IHPG + T P PP TPS SS + + + T E TK PPS
Sbjct: 185 YIHPGDHSEVLEQLGLRTTTPGPP--TPSSVSSSSSSSSSLADTPEIEASLTKVPPS 239
>BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein.
Length = 1235
Score = 31.9 bits (69), Expect = 2.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 228 SKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPP-SKRPFSTFTVTSLPV 52
S + +T+PAPP I+ P +S L N + TPT + P S P T+LP
Sbjct: 409 SSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTALPP 468
Query: 51 P 49
P
Sbjct: 469 P 469
>AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein 1
protein.
Length = 1259
Score = 31.9 bits (69), Expect = 2.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 228 SKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPP-SKRPFSTFTVTSLPV 52
S + +T+PAPP I+ P +S L N + TPT + P S P T+LP
Sbjct: 409 SSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTALPP 468
Query: 51 P 49
P
Sbjct: 469 P 469
>AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein.
Length = 1011
Score = 31.9 bits (69), Expect = 2.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 228 SKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPP-SKRPFSTFTVTSLPV 52
S + +T+PAPP I+ P +S L N + TPT + P S P T+LP
Sbjct: 161 SSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTALPP 220
Query: 51 P 49
P
Sbjct: 221 P 221
>AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein.
Length = 1266
Score = 31.9 bits (69), Expect = 2.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 228 SKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPP-SKRPFSTFTVTSLPV 52
S + +T+PAPP I+ P +S L N + TPT + P S P T+LP
Sbjct: 440 SSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTALPP 499
Query: 51 P 49
P
Sbjct: 500 P 500
>BC103913-1|AAI03914.1| 546|Homo sapiens transcription elongation
factor B polypeptide 3C (elongin A3) protein.
Length = 546
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -2
Query: 469 PSRRTNEKHVKKAPSTR--LERRAPFQQRDHPRPPSRRPK 356
P T + +P R R P QQR HPR PSR P+
Sbjct: 113 PENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSPSREPR 152
>BC103912-1|AAI03913.1| 544|Homo sapiens TCEB3C protein protein.
Length = 544
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -2
Query: 469 PSRRTNEKHVKKAPSTR--LERRAPFQQRDHPRPPSRRPK 356
P T + +P R R P QQR HPR PSR P+
Sbjct: 111 PENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSPSREPR 150
>AB076840-1|BAC01113.1| 546|Homo sapiens transcription elongation
factor Elongin A3 protein.
Length = 546
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -2
Query: 469 PSRRTNEKHVKKAPSTR--LERRAPFQQRDHPRPPSRRPK 356
P T + +P R R P QQR HPR PSR P+
Sbjct: 113 PENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSPSREPR 152
>M22406-1|AAA36335.1| 76|Homo sapiens protein ( Human intestinal
mucin mRNA, partial cds, clone SMUC 42. ).
Length = 76
Score = 31.1 bits (67), Expect = 4.8
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -3
Query: 225 KSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKG--PPSKRPFS-TFTVTSLP 55
K T + P P+P T+ + T+ TPT G P+ P S T TVT P
Sbjct: 3 KQTHQRTPLTDTPYPTPTVQRPTMTPITTTTTVTPTPTPTGTQTPTTTPISTTTTVTPTP 62
Query: 54 VP 49
P
Sbjct: 63 TP 64
>AM709890-1|CAM97225.1| 639|Homo sapiens platelet glycoprotein Ib
alpha polypeptide protein.
Length = 639
Score = 31.1 bits (67), Expect = 4.8
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = -3
Query: 261 IHPGAKGHNESSKSTKETKPAP--PKITPSPCSSMQTLQKANSCTSCNET------PTTK 106
+H + +++ KST E P+P + P P +M TL+ S T+ T PTT
Sbjct: 365 LHMESITFSKTPKSTTEPTPSPTTSEPVPEPAPNMTTLEPTPSPTTPEPTSEPAPSPTTP 424
Query: 105 GPPSKRPFSTFTVTSLPVP 49
P S+ S T P+P
Sbjct: 425 EPTSEPAPSPTTPEPTPIP 443
>AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein.
Length = 1382
Score = 31.1 bits (67), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -2
Query: 565 VPPGAERVRVDVTITSSSNDITLLPPLDSSDQPSRRTNEKHVKKAPSTRLERRAPFQQRD 386
VP G ++ +V ++ + P ++S Q R + APS L P +
Sbjct: 289 VPLGPGQISAEVQAPPPVVNVRVHHPPEASVQVHRIESSNAESAAPSQHL---LPHPKPS 345
Query: 385 HPRPPSRRP 359
HPRPP+++P
Sbjct: 346 HPRPPTQKP 354
>AF135960-1|AAF62352.3| 1256|Homo sapiens latent transforming growth
factor beta binding protein 3 protein.
Length = 1256
Score = 31.1 bits (67), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -2
Query: 565 VPPGAERVRVDVTITSSSNDITLLPPLDSSDQPSRRTNEKHVKKAPSTRLERRAPFQQRD 386
VP G ++ +V ++ + P ++S Q R + APS L P +
Sbjct: 210 VPLGPGQISAEVQAPPPVVNVRVHHPPEASVQVHRIESSNAESAAPSQHL---LPHPKPS 266
Query: 385 HPRPPSRRP 359
HPRPP+++P
Sbjct: 267 HPRPPTQKP 275
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -3
Query: 222 STKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLPVP 49
S K T PAP +++P+P +L K + P + +T T T++P P
Sbjct: 1105 SLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTASTTTATATTTAVPAP 1162
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -3
Query: 222 STKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRPFSTFTVTSLPVP 49
S K T PAP +++P+P +L K + P + +T T T++P P
Sbjct: 908 SLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAP 965
>X81649-1|CAA57309.1| 850|Homo sapiens gastric mucin protein.
Length = 850
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -3
Query: 249 AKGHNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPT 112
A G S K T T P+PP + + SSM T S S TPT
Sbjct: 522 APGTATSVKKTFST-PSPPPVPATSTSSMSTTAPGTSVVSSKPTPT 566
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -3
Query: 249 AKGHNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPT 112
A G S K T T P+PP + + SSM T S S TPT
Sbjct: 1526 APGTATSVKKTFST-PSPPPVPATSTSSMSTTAPGTSVVSSKPTPT 1570
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -3
Query: 249 AKGHNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPT 112
A G S K T T P+PP + + SSM T S S TPT
Sbjct: 1899 APGTATSVKKTFST-PSPPPVPATSTSSMSTTAPGTSVVSSKPTPT 1943
>AF329268-1|AAO13348.1| 404|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 404
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -2
Query: 562 PPGAERVRVDVTITSSSNDITLLPPLDSSDQPSRRTNEKHVKKAPSTRLER-RAPFQQRD 386
PP A ++ T ++I +PP P+R ++ +++ P L++ P
Sbjct: 81 PPSAPVIKQGAGTTERKHEIKKIPPERPEMLPNRTEEKERLEREPKLDLQKPSVPAIPPK 140
Query: 385 HPRPP 371
PRPP
Sbjct: 141 KPRPP 145
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,226,717
Number of Sequences: 237096
Number of extensions: 2243996
Number of successful extensions: 9325
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9251
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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