Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15l11
(791 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 26 0.46
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 3.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 3.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 3.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 3.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 3.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 3.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 3.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 3.3
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 3.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.3
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 4.3
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 5.7
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 5.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.5
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 7.5
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 9.9
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 9.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 9.9
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.8 bits (54), Expect = 0.46
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -3
Query: 240 HNESSKSTKETKPAPPKITPSPCSSMQTLQKANSCTSCNETPTTKGPPSKRP 85
H + +S P +TP+P + Q L++A + TP +K+P
Sbjct: 143 HEKLVESFPRGGSLPTPVTPTPTTVQQLLRRAQIRRNERRTPDPHDETAKKP 194
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNNGKFPDKSQLNE 650
K+ S R R RSK+ I ++ LS N +NN +K N+
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNNGKFPDKSQLNE 650
K+ S R R RSK+ I ++ LS N +NN +K N+
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNNGKFPDKSQLNE 650
K+ S R R RSK+ I ++ LS N +NN +K N+
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNNGKFPDKSQLNE 650
K+ S R R RSK+ I ++ LS N +NN +K N+
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNNGKFPDKSQLNE 650
K+ S R R RSK+ I ++ LS N +NN +K N+
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNNGKFPDKSQLNE 650
K+ S R R RSK+ I ++ LS N +NN +K N+
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNNGKFPDKSQLNE 650
K+ S R R RSK+ I ++ LS N +NN +K N+
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNNGKFPDKSQLNE 650
K+ S R R RSK+ I ++ LS N +NN +K N+
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 108
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.0 bits (47), Expect = 3.3
Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Frame = -3
Query: 252 GAKGHNESSKSTKETKPAPPKITPS----PCSSMQTLQKANSCTSCNETPTTKGPPSKRP 85
G +G +S ET+P +T P + + N C N T GP + +
Sbjct: 194 GTEGIAKSGDVLVETEPIYYNLTMVKLNWPKKRVTKMSSINPCIFDNATIVNNGPEAAKM 253
Query: 84 FSTFTVT 64
FT T
Sbjct: 254 AKAFTYT 260
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 3.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNNGKFPDKSQLNE 650
K+ S R R RSK+ I ++ LS N +NN +K N+
Sbjct: 297 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 341
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 3.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNNGKFPDKSQLNE 650
K+ S R R RSK+ I ++ LS N +NN +K N+
Sbjct: 297 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNK 341
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 474 SEESNGGRSVMSLEEEVIVTS-TRTLSAPGGTCNSM 578
SEE N ++ E+ V+VT+ T T++ P + SM
Sbjct: 814 SEEKNINDHCVTTEQSVVVTNVTTTINTPTTSVISM 849
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNNGKFPDKSQLNE 650
K+ S R R RSK+ I ++ LS N +NN +K N+
Sbjct: 64 KERSRNRTERERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNYNK 108
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 784 KKNSPQRLYRHRSKKNVISHTSSLLSLMKNESNN 683
K+ S R R RSK+ I ++ LS N +NN
Sbjct: 64 KERSRNRTERERSKEPKIISNNNSLSNNYNYNNN 97
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 5.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 477 EESNGGRSVMSLEEEVIVTSTRTLSAPGGTCNSMLPA 587
EES+GG + + ++ + S PGG +S P+
Sbjct: 58 EESSGGVELGWFNDSAAAITSTSPSYPGGGSSSPSPS 94
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 611 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 516
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 611 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 516
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 611 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 516
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 611 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 516
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 611 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 516
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 611 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 516
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 611 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 516
+K T+ QC T++ + RR YYFF
Sbjct: 236 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 267
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 611 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 516
+K T+ QC T++ + RR YYFF
Sbjct: 236 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 267
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.8 bits (44), Expect = 7.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 85 GALTWWAFG 111
G LT+WAFG
Sbjct: 75 GGLTYWAFG 83
Score = 21.8 bits (44), Expect = 7.5
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = +3
Query: 423 VLGAFLTCFSL 455
++GAF+TCF++
Sbjct: 316 MIGAFITCFTM 326
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 231 SSKSTKETKPAPPKITPSPCSSMQTL 154
S +S K T PP TP+ + M+ L
Sbjct: 374 SGRSQKSTTGPPPGPTPAQKARMRAL 399
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +3
Query: 393 CWNGALLSRRVLGAFLTCFSLVRREGWSEES 485
CW+G R +LGA + ++++ +S
Sbjct: 838 CWSGEPSKRPLLGAIVPVLESIQQKAKRSKS 868
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +3
Query: 393 CWNGALLSRRVLGAFLTCFSLVRREGWSEES 485
CW+G R +LGA + ++++ +S
Sbjct: 876 CWSGEPSKRPLLGAIVPVLESIQQKAKRSKS 906
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,172
Number of Sequences: 438
Number of extensions: 3853
Number of successful extensions: 32
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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