Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15l03
         (633 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101591-1|AAI01592.1|  306|Homo sapiens zinc finger protein 625...    31   2.6  
BC101589-1|AAI01590.1|  306|Homo sapiens zinc finger protein 625...    31   2.6  
BC007868-1|AAH07868.1|  306|Homo sapiens zinc finger protein 625...    31   2.6  
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf...    31   2.6  
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr...    31   2.6  
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr...    31   2.6  
AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.              31   2.6  

>BC101591-1|AAI01592.1|  306|Homo sapiens zinc finger protein 625
           protein.
          Length = 306

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = -1

Query: 630 GHNQNEGDSVHALIEKCTKNKLAYTPFEWFCLVRWAKQKGKPYIVEE 490
           GH   E         KCT  K A++   +F    WA   GKPY  EE
Sbjct: 55  GHKPYEYQEYGQKPYKCTYCKKAFSDLPYFRTHEWAHTGGKPYDCEE 101


>BC101589-1|AAI01590.1|  306|Homo sapiens zinc finger protein 625
           protein.
          Length = 306

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = -1

Query: 630 GHNQNEGDSVHALIEKCTKNKLAYTPFEWFCLVRWAKQKGKPYIVEE 490
           GH   E         KCT  K A++   +F    WA   GKPY  EE
Sbjct: 55  GHKPYEYQEYGQKPYKCTYCKKAFSDLPYFRTHEWAHTGGKPYDCEE 101


>BC007868-1|AAH07868.1|  306|Homo sapiens zinc finger protein 625
           protein.
          Length = 306

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = -1

Query: 630 GHNQNEGDSVHALIEKCTKNKLAYTPFEWFCLVRWAKQKGKPYIVEE 490
           GH   E         KCT  K A++   +F    WA   GKPY  EE
Sbjct: 55  GHKPYEYQEYGQKPYKCTYCKKAFSDLPYFRTHEWAHTGGKPYDCEE 101


>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
            A protein.
          Length = 2595

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 20/49 (40%), Positives = 27/49 (55%)
 Frame = +3

Query: 132  TVVNSIWYALDKIIMSAGYDLRFAHAHQIIFFRLRYHRQPIGIQYINIY 278
            TV N + Y L K+ MS      F++A Q I    RY  Q IG+Q+ N+Y
Sbjct: 1195 TVENELSYVL-KVFMSLLSPTAFSYASQYI---ARYEEQGIGLQWENMY 1239


>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
            transporter family A member 12 protein.
          Length = 2277

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 20/49 (40%), Positives = 27/49 (55%)
 Frame = +3

Query: 132  TVVNSIWYALDKIIMSAGYDLRFAHAHQIIFFRLRYHRQPIGIQYINIY 278
            TV N + Y L K+ MS      F++A Q I    RY  Q IG+Q+ N+Y
Sbjct: 877  TVENELSYVL-KVFMSLLSPTAFSYASQYI---ARYEEQGIGLQWENMY 921


>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
            transporter family A member 12 protein.
          Length = 2347

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 20/49 (40%), Positives = 27/49 (55%)
 Frame = +3

Query: 132  TVVNSIWYALDKIIMSAGYDLRFAHAHQIIFFRLRYHRQPIGIQYINIY 278
            TV N + Y L K+ MS      F++A Q I    RY  Q IG+Q+ N+Y
Sbjct: 947  TVENELSYVL-KVFMSLLSPTAFSYASQYI---ARYEEQGIGLQWENMY 991


>AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.
          Length = 2413

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 20/49 (40%), Positives = 27/49 (55%)
 Frame = +3

Query: 132  TVVNSIWYALDKIIMSAGYDLRFAHAHQIIFFRLRYHRQPIGIQYINIY 278
            TV N + Y L K+ MS      F++A Q I    RY  Q IG+Q+ N+Y
Sbjct: 1195 TVENELSYVL-KVFMSLLSPTAFSYASQYI---ARYEEQGIGLQWENMY 1239


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,540,554
Number of Sequences: 237096
Number of extensions: 1559372
Number of successful extensions: 2334
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2334
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)