Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15k23
(714 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069228-1|AAH69228.1| 555|Homo sapiens phosphatidylinositol gl... 123 6e-28
BC001319-1|AAH01319.2| 243|Homo sapiens PIGS protein protein. 123 6e-28
AY359112-1|AAQ89470.1| 547|Homo sapiens PIGS protein. 123 6e-28
AB057723-1|BAB60853.1| 555|Homo sapiens phosphatidyl inositol g... 123 6e-28
AK075428-1|BAC11615.1| 555|Homo sapiens protein ( Homo sapiens ... 120 7e-27
AK055512-1|BAB70938.1| 184|Homo sapiens protein ( Homo sapiens ... 95 2e-19
BX640839-1|CAE45912.1| 162|Homo sapiens hypothetical protein pr... 88 3e-17
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 32 1.8
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 32 1.8
U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein. 31 3.1
AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein. 31 3.1
AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein. 31 3.1
BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein. 31 4.1
AL356755-4|CAC16508.2| 269|Homo sapiens GDNF family receptor al... 31 4.1
AK074287-1|BAB85038.1| 1079|Homo sapiens protein ( Homo sapiens ... 31 4.1
AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein. 31 4.1
AJ291675-1|CAC19692.1| 182|Homo sapiens putative GDNF family re... 31 4.1
AJ291673-1|CAC19690.1| 269|Homo sapiens GDNF family receptor al... 31 4.1
AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible... 31 4.1
AF466143-1|AAL96479.1| 2429|Homo sapiens retinoic acid inducible... 31 4.1
AF253318-1|AAG25925.1| 269|Homo sapiens GFR receptor alpha 4 pr... 31 4.1
AB063116-1|BAC00854.1| 2429|Homo sapiens helicase protein. 31 4.1
AB063115-1|BAC00853.1| 2365|Homo sapiens helicase protein. 31 4.1
AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein. 31 4.1
BC146661-1|AAI46662.1| 686|Homo sapiens STIM2 protein protein. 31 5.4
BC057231-1|AAH57231.1| 439|Homo sapiens STIM2 protein protein. 31 5.4
BC015659-1|AAH15659.2| 555|Homo sapiens STIM2 protein protein. 31 5.4
AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein pr... 31 5.4
AK023369-1|BAB14545.1| 310|Homo sapiens TRAP170 mRNA. protein. 31 5.4
AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction mol... 31 5.4
AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein. 31 5.4
>BC069228-1|AAH69228.1| 555|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class S protein.
Length = 555
Score = 123 bits (297), Expect = 6e-28
Identities = 77/218 (35%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Frame = -2
Query: 698 INLALYIVPCDKAPIIIYDNEGRKNPLSIQAFMSPKWGGVVIASPPAEQCSQQVR--EFE 525
+N LY+ +P+ I D +G P++ AF SP+WGG+++ + ++ + V E
Sbjct: 322 LNFLLYVPELAHSPLYIQDKDGA--PVATNAFHSPRWGGIMVYNVDSKTYNASVLPVRVE 379
Query: 524 PSVGQIMGAFVSHLRELLGITKKDAIEGAHLEPSRSVSPRRWEVDALLRIRTLEQVTSAE 345
+ ++M F++ LR L GI + L S WE+D LL R++E + +A
Sbjct: 380 VDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWARSVENLATAT 439
Query: 344 RTLQSLAQLLEEISNIVINDEVGA----SIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
TL SLAQLL +ISNIVI D+V + ++
Sbjct: 440 TTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSE 499
Query: 176 XAFTHPGLLALLYFPDDQKYAIYIPLFLPIMFPVVLSL 63
AF P LL LLYFPDDQK+AIYIPLFLP+ P++LSL
Sbjct: 500 LAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSL 537
>BC001319-1|AAH01319.2| 243|Homo sapiens PIGS protein protein.
Length = 243
Score = 123 bits (297), Expect = 6e-28
Identities = 77/218 (35%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Frame = -2
Query: 698 INLALYIVPCDKAPIIIYDNEGRKNPLSIQAFMSPKWGGVVIASPPAEQCSQQVR--EFE 525
+N LY+ +P+ I D +G P++ AF SP+WGG+++ + ++ + V E
Sbjct: 10 LNFLLYVPELAHSPLYIQDKDGA--PVATNAFHSPRWGGIMVYNVDSKTYNASVLPVRVE 67
Query: 524 PSVGQIMGAFVSHLRELLGITKKDAIEGAHLEPSRSVSPRRWEVDALLRIRTLEQVTSAE 345
+ ++M F++ LR L GI + L S WE+D LL R++E + +A
Sbjct: 68 VDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWARSVENLATAT 127
Query: 344 RTLQSLAQLLEEISNIVINDEVGA----SIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
TL SLAQLL +ISNIVI D+V + ++
Sbjct: 128 TTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSE 187
Query: 176 XAFTHPGLLALLYFPDDQKYAIYIPLFLPIMFPVVLSL 63
AF P LL LLYFPDDQK+AIYIPLFLP+ P++LSL
Sbjct: 188 LAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSL 225
>AY359112-1|AAQ89470.1| 547|Homo sapiens PIGS protein.
Length = 547
Score = 123 bits (297), Expect = 6e-28
Identities = 77/218 (35%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Frame = -2
Query: 698 INLALYIVPCDKAPIIIYDNEGRKNPLSIQAFMSPKWGGVVIASPPAEQCSQQVR--EFE 525
+N LY+ +P+ I D +G P++ AF SP+WGG+++ + ++ + V E
Sbjct: 314 LNFLLYVPELAHSPLYIQDKDGA--PVATNAFHSPRWGGIMVYNVDSKTYNASVLPVRVE 371
Query: 524 PSVGQIMGAFVSHLRELLGITKKDAIEGAHLEPSRSVSPRRWEVDALLRIRTLEQVTSAE 345
+ ++M F++ LR L GI + L S WE+D LL R++E + +A
Sbjct: 372 VDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWARSVENLATAT 431
Query: 344 RTLQSLAQLLEEISNIVINDEVGA----SIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
TL SLAQLL +ISNIVI D+V + ++
Sbjct: 432 TTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSE 491
Query: 176 XAFTHPGLLALLYFPDDQKYAIYIPLFLPIMFPVVLSL 63
AF P LL LLYFPDDQK+AIYIPLFLP+ P++LSL
Sbjct: 492 LAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSL 529
>AB057723-1|BAB60853.1| 555|Homo sapiens phosphatidyl inositol
glycan class S protein.
Length = 555
Score = 123 bits (297), Expect = 6e-28
Identities = 77/218 (35%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Frame = -2
Query: 698 INLALYIVPCDKAPIIIYDNEGRKNPLSIQAFMSPKWGGVVIASPPAEQCSQQVR--EFE 525
+N LY+ +P+ I D +G P++ AF SP+WGG+++ + ++ + V E
Sbjct: 322 LNFLLYVPELAHSPLYIQDKDGA--PVATNAFHSPRWGGIMVYNVDSKTYNASVLPVRVE 379
Query: 524 PSVGQIMGAFVSHLRELLGITKKDAIEGAHLEPSRSVSPRRWEVDALLRIRTLEQVTSAE 345
+ ++M F++ LR L GI + L S WE+D LL R++E + +A
Sbjct: 380 VDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWARSVENLATAT 439
Query: 344 RTLQSLAQLLEEISNIVINDEVGA----SIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
TL SLAQLL +ISNIVI D+V + ++
Sbjct: 440 TTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSE 499
Query: 176 XAFTHPGLLALLYFPDDQKYAIYIPLFLPIMFPVVLSL 63
AF P LL LLYFPDDQK+AIYIPLFLP+ P++LSL
Sbjct: 500 LAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSL 537
>AK075428-1|BAC11615.1| 555|Homo sapiens protein ( Homo sapiens
cDNA PSEC0119 fis, clone PLACE1002376, highly similar to
GPI transamidase component PIG-S. ).
Length = 555
Score = 120 bits (288), Expect = 7e-27
Identities = 76/218 (34%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Frame = -2
Query: 698 INLALYIVPCDKAPIIIYDNEGRKNPLSIQAFMSPKWGGVVIASPPAEQCSQQVR--EFE 525
+N LY+ +P+ I D +G P++ AF SP+WGG+++ + ++ + V E
Sbjct: 322 LNFLLYVPELAHSPLYIQDKDGA--PVATNAFHSPRWGGIMVYNVDSKTYNASVLPVRVE 379
Query: 524 PSVGQIMGAFVSHLRELLGITKKDAIEGAHLEPSRSVSPRRWEVDALLRIRTLEQVTSAE 345
+ ++M F++ LR L GI + L S WE+D LL R++E + +A
Sbjct: 380 VDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWARSVENLATAT 439
Query: 344 RTLQSLAQLLEEISNIVINDEVGA----SIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
TL SLAQLL +ISNIVI D+V + ++
Sbjct: 440 TTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSE 499
Query: 176 XAFTHPGLLALLYFPDDQKYAIYIPLFLPIMFPVVLSL 63
AF P LL LLYFPD QK+AIYIPLFLP+ P++LSL
Sbjct: 500 LAFFDPSLLHLLYFPDYQKFAIYIPLFLPMAVPILLSL 537
>AK055512-1|BAB70938.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ30950 fis, clone HCASM1000061. ).
Length = 184
Score = 95.1 bits (226), Expect = 2e-19
Identities = 62/164 (37%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Frame = -2
Query: 527 EPSVGQIMGAFVSHLRELLGITKKDAIEGAHLEPSRSVSPRRWEVDALLRIRTLEQVTSA 348
E + ++M F++ LR L GI + L S WE+D LL R++E + +A
Sbjct: 8 EVDMVRVMEVFLAQLRLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWARSVENLATA 67
Query: 347 ERTLQSLAQLLEEISNIVINDEVGA----SIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
TL SLAQLL +ISNIVI D+V + ++
Sbjct: 68 TTTLTSLAQLLGKISNIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEVVTSS 127
Query: 179 XXAFTHPGLLALLYFPDDQKYAIYIPLFLPIMFPVVLSLRILLL 48
AF P LL LLYFPDDQK+ IYIPLFLP+ P++LSL L L
Sbjct: 128 ELAFFDPSLLHLLYFPDDQKFPIYIPLFLPMAVPILLSLVKLFL 171
>BX640839-1|CAE45912.1| 162|Homo sapiens hypothetical protein
protein.
Length = 162
Score = 88.2 bits (209), Expect = 3e-17
Identities = 56/144 (38%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Frame = -2
Query: 482 RELLGITKKDAIEGAHLEPSRSVSPRRWEVDALLRIRTLEQVTSAERTLQSLAQLLEEIS 303
R L GI + L S WE+D LL R++E + +A TL SLAQLL +IS
Sbjct: 1 RLLFGIAQPQLPPKCLLSGPTSEGLMTWELDRLLWARSVENLATATTTLTSLAQLLGKIS 60
Query: 302 NIVINDEVGA----SIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFTHPGLLALLYF 135
NIVI D+V + ++ F P LL LLYF
Sbjct: 61 NIVIKDDVASEVYKAVAAVQKSAEELASGHLASAFVASQEAVTSSELVFFDPSLLHLLYF 120
Query: 134 PDDQKYAIYIPLFLPIMFPVVLSL 63
PDDQK+AIYIPLFLP+ P++LSL
Sbjct: 121 PDDQKFAIYIPLFLPMAVPILLSL 144
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 484 RWDTNAPMICPTLGSNSRTCWEHCSAGGLAITTPPHLGD--INAC-IDKGFL 630
R +T PM CP S+ C + CS G A++ PP D C D GFL
Sbjct: 1523 RTETFCPMECPP-NSHYELCADTCSLGCSALSAPPQCQDGCAEGCQCDSGFL 1573
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 32.3 bits (70), Expect = 1.8
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 484 RWDTNAPMICPTLGSNSRTCWEHCSAGGLAITTPPHLGD--INAC-IDKGFL 630
R +T PM CP S+ C + CS G A++ PP D C D GFL
Sbjct: 1523 RTETFCPMECPP-NSHYELCADTCSLGCSALSAPPQCQDGCAEGCQCDSGFL 1573
>U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.
Length = 3321
Score = 31.5 bits (68), Expect = 3.1
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = -1
Query: 561 GRAVLPAGPRVRAQRGTDHGRVRVPPQGVARDHEKGRNRRSTLRAFEVGVAAPLGGGRAT 382
G+A P GPR R + R P + V H + R L A A+P GGRAT
Sbjct: 3217 GKAPRP-GPRARQPQSPPRTRESPPTRDVPSGHTRDPARGRRLAA----AASPHSGGRAT 3271
Query: 381 PHQDLR 364
P + R
Sbjct: 3272 PSPNSR 3277
>AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.
Length = 3336
Score = 31.5 bits (68), Expect = 3.1
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = -1
Query: 561 GRAVLPAGPRVRAQRGTDHGRVRVPPQGVARDHEKGRNRRSTLRAFEVGVAAPLGGGRAT 382
G+A P GPR R + R P + V H + R L A A+P GGRAT
Sbjct: 3228 GKAPRP-GPRARQPQSPPRTRESPPTRDVPSGHTRDPARGRRLAA----AASPHSGGRAT 3282
Query: 381 PHQDLR 364
P + R
Sbjct: 3283 PSPNSR 3288
>AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.
Length = 3284
Score = 31.5 bits (68), Expect = 3.1
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = -1
Query: 561 GRAVLPAGPRVRAQRGTDHGRVRVPPQGVARDHEKGRNRRSTLRAFEVGVAAPLGGGRAT 382
G+A P GPR R + R P + V H + R L A A+P GGRAT
Sbjct: 3176 GKAPRP-GPRARQPQSPPRTRESPPTRDVPSGHTRDPARGRRLAA----AASPHSGGRAT 3230
Query: 381 PHQDLR 364
P + R
Sbjct: 3231 PSPNSR 3236
>BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein.
Length = 2432
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 373 LMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLRWDTNA 501
++ S +S+ + DL S A S +S PSNSL W TNA
Sbjct: 1346 VLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNA 1388
>AL356755-4|CAC16508.2| 269|Homo sapiens GDNF family receptor alpha
4 protein.
Length = 269
Score = 31.1 bits (67), Expect = 4.1
Identities = 26/117 (22%), Positives = 40/117 (34%), Gaps = 5/117 (4%)
Frame = +1
Query: 307 ISSNNCARDCRVLSADVTCSKVLMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLR 486
+ N C +AD C ++ A R ++C ++ FF +L
Sbjct: 21 VGGNRCVDAAEACTADARCQRLRSEYVAQCLGRAAQGGCPRARCRRALRRFFARGPPAL- 79
Query: 487 WDTNAPMICPTLG-----SNSRTCWEHCSAGGLAITTPPHLGDINACIDKGFLRPSL 642
T+A + CP G +T C+ G P L +N C RP L
Sbjct: 80 --THALLFCPCAGPACAERRRQTFVPSCAFSGPGPAPPSCLEPLNFCERSRVCRPRL 134
>AK074287-1|BAB85038.1| 1079|Homo sapiens protein ( Homo sapiens
cDNA FLJ23707 fis, clone HEP11670. ).
Length = 1079
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 373 LMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLRWDTNA 501
++ S +S+ + DL S A S +S PSNSL W TNA
Sbjct: 432 VLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNA 474
>AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein.
Length = 2488
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 373 LMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLRWDTNA 501
++ S +S+ + DL S A S +S PSNSL W TNA
Sbjct: 1369 VLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNA 1411
>AJ291675-1|CAC19692.1| 182|Homo sapiens putative GDNF family
receptor alpha 4, secreted isoform c protein.
Length = 182
Score = 31.1 bits (67), Expect = 4.1
Identities = 26/117 (22%), Positives = 40/117 (34%), Gaps = 5/117 (4%)
Frame = +1
Query: 307 ISSNNCARDCRVLSADVTCSKVLMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLR 486
+ N C +AD C ++ A R ++C ++ FF +L
Sbjct: 21 VGGNRCVDAAEACTADARCQRLRSEYVAQCLGRAAQGGCPRARCRRALRRFFARGPPAL- 79
Query: 487 WDTNAPMICPTLG-----SNSRTCWEHCSAGGLAITTPPHLGDINACIDKGFLRPSL 642
T+A + CP G +T C+ G P L +N C RP L
Sbjct: 80 --THALLFCPCAGPACAERRRQTFVPSCAFSGPGPAPPSCLEPLNFCERSRVCRPRL 134
>AJ291673-1|CAC19690.1| 269|Homo sapiens GDNF family receptor alpha
4, GPI anchored isoform protein.
Length = 269
Score = 31.1 bits (67), Expect = 4.1
Identities = 26/117 (22%), Positives = 40/117 (34%), Gaps = 5/117 (4%)
Frame = +1
Query: 307 ISSNNCARDCRVLSADVTCSKVLMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLR 486
+ N C +AD C ++ A R ++C ++ FF +L
Sbjct: 21 VGGNRCVDAAEACTADARCQRLRSEYVAQCLGRAAQGGCPRARCRRALRRFFARGPPAL- 79
Query: 487 WDTNAPMICPTLG-----SNSRTCWEHCSAGGLAITTPPHLGDINACIDKGFLRPSL 642
T+A + CP G +T C+ G P L +N C RP L
Sbjct: 80 --THALLFCPCAGPACAERRRQTFVPSCAFSGPGPAPPSCLEPLNFCERSRVCRPRL 134
>AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible in
neuroblastoma cells RAINB1d protein.
Length = 2432
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 373 LMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLRWDTNA 501
++ S +S+ + DL S A S +S PSNSL W TNA
Sbjct: 1346 VLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNA 1388
>AF466143-1|AAL96479.1| 2429|Homo sapiens retinoic acid inducible in
neuroblastoma cells RAINB1 protein.
Length = 2429
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 373 LMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLRWDTNA 501
++ S +S+ + DL S A S +S PSNSL W TNA
Sbjct: 1346 VLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNA 1388
>AF253318-1|AAG25925.1| 269|Homo sapiens GFR receptor alpha 4
protein protein.
Length = 269
Score = 31.1 bits (67), Expect = 4.1
Identities = 26/117 (22%), Positives = 40/117 (34%), Gaps = 5/117 (4%)
Frame = +1
Query: 307 ISSNNCARDCRVLSADVTCSKVLMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLR 486
+ N C +AD C ++ A R ++C ++ FF +L
Sbjct: 21 VGGNRCVDAAEACTADARCQRLRSEYVAQCLGRAAQGGCPRARCRRALRRFFARGPPAL- 79
Query: 487 WDTNAPMICPTLG-----SNSRTCWEHCSAGGLAITTPPHLGDINACIDKGFLRPSL 642
T+A + CP G +T C+ G P L +N C RP L
Sbjct: 80 --THALLFCPCAGPACAERRRQTFVPSCAFSGPGPAPPSCLEPLNFCERSRVCRPRL 134
>AB063116-1|BAC00854.1| 2429|Homo sapiens helicase protein.
Length = 2429
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 373 LMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLRWDTNA 501
++ S +S+ + DL S A S +S PSNSL W TNA
Sbjct: 1346 VLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNA 1388
>AB063115-1|BAC00853.1| 2365|Homo sapiens helicase protein.
Length = 2365
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 373 LMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLRWDTNA 501
++ S +S+ + DL S A S +S PSNSL W TNA
Sbjct: 1282 VLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNA 1324
>AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein.
Length = 2464
Score = 31.1 bits (67), Expect = 4.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 373 LMRSSASTSQRRGDTDLEGSKCAPSIASFFVIPSNSLRWDTNA 501
++ S +S+ + DL S A S +S PSNSL W TNA
Sbjct: 1378 VLSSGSSSPLYSKNVDLNQSPLASSPSSAHSAPSNSLTWGTNA 1420
>BC146661-1|AAI46662.1| 686|Homo sapiens STIM2 protein protein.
Length = 686
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 62 SMTKPPGTLSVKTTVCRSRISDRPGS 139
+M KPPG+L+ +++CRSR S P S
Sbjct: 585 TMAKPPGSLARSSSLCRSRRSIVPSS 610
>BC057231-1|AAH57231.1| 439|Homo sapiens STIM2 protein protein.
Length = 439
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 62 SMTKPPGTLSVKTTVCRSRISDRPGS 139
+M KPPG+L+ +++CRSR S P S
Sbjct: 191 TMAKPPGSLARSSSLCRSRRSIVPSS 216
>BC015659-1|AAH15659.2| 555|Homo sapiens STIM2 protein protein.
Length = 555
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 62 SMTKPPGTLSVKTTVCRSRISDRPGS 139
+M KPPG+L+ +++CRSR S P S
Sbjct: 307 TMAKPPGSLARSSSLCRSRRSIVPSS 332
>AL136577-1|CAB66512.2| 769|Homo sapiens hypothetical protein
protein.
Length = 769
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 62 SMTKPPGTLSVKTTVCRSRISDRPGS 139
+M KPPG+L+ +++CRSR S P S
Sbjct: 521 TMAKPPGSLARSSSLCRSRRSIVPSS 546
>AK023369-1|BAB14545.1| 310|Homo sapiens TRAP170 mRNA. protein.
Length = 310
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 62 SMTKPPGTLSVKTTVCRSRISDRPGS 139
+M KPPG+L+ +++CRSR S P S
Sbjct: 169 TMAKPPGSLARSSSLCRSRRSIVPSS 194
>AF328905-1|AAK82337.1| 746|Homo sapiens stromal interaction
molecule 2 protein.
Length = 746
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 62 SMTKPPGTLSVKTTVCRSRISDRPGS 139
+M KPPG+L+ +++CRSR S P S
Sbjct: 498 TMAKPPGSLARSSSLCRSRRSIVPSS 523
>AB040915-1|BAA96006.1| 818|Homo sapiens KIAA1482 protein protein.
Length = 818
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 62 SMTKPPGTLSVKTTVCRSRISDRPGS 139
+M KPPG+L+ +++CRSR S P S
Sbjct: 570 TMAKPPGSLARSSSLCRSRRSIVPSS 595
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,407,349
Number of Sequences: 237096
Number of extensions: 2013385
Number of successful extensions: 7110
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7102
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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