Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15k03
(594 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.3
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 23 2.3
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 23 2.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 6.9
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 9.1
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 9.1
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 9.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.1
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 9.1
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 9.1
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = -1
Query: 477 EVVPVSIAPFEDRKGNCSCGGFPTVTPDPGSLPLLSQTPSL 355
++ P + AP + G P + PGS+P + PS+
Sbjct: 408 QLPPSAGAPMPPIPNMSNMSGMPPLPNMPGSMPTMPTMPSM 448
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 366 FEKVGADFQDLASQSEILRKS 428
+EK DFQD+ S SE +++
Sbjct: 235 YEKRSTDFQDVESGSESFKRA 255
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 366 FEKVGADFQDLASQSEILRKS 428
+EK DFQD+ S SE +++
Sbjct: 235 YEKRSTDFQDVESGSESFKRA 255
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 426 SCGGFPTVTPDPG 388
SCGG PT+ PG
Sbjct: 369 SCGGGPTILTTPG 381
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 379 GQTSRIWRHSRKSSARAVAFPVFEW 453
G R WR S + AV P EW
Sbjct: 1321 GHVVRPWRGSATLACNAVGDPTREW 1345
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 379 GQTSRIWRHSRKSSARAVAFPVFEW 453
G R WR S + AV P EW
Sbjct: 1317 GHVVRPWRGSATLACNAVGDPTREW 1341
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 6.9
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 386 VCPYFLKHQV 357
+CPY LKH++
Sbjct: 454 LCPYTLKHKI 463
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.0 bits (42), Expect = 9.1
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 589 QYLFIQH*KRT*DGLLEGIFLRHLHSHVGR 500
QY H ++ G + +FL H H GR
Sbjct: 519 QYKIAVHSEQNVPGAVVRVFLGPKHDHQGR 548
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 348 KCDQEGDNTCKILCNALATVTK 283
+C EG+ ++L +ALAT K
Sbjct: 56 RCTAEGNELKRVLPDALATDCK 77
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 348 KCDQEGDNTCKILCNALATVTK 283
+C EG+ ++L +ALAT K
Sbjct: 56 RCTAEGNELKRVLPDALATDCK 77
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 9.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 315 ILCNALATVTKAKGPEILCSRLKDVNELK 229
ILCN + T+ + + E+ + NELK
Sbjct: 453 ILCNLMRTMNRKQISELESNMQISPNELK 481
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 348 KCDQEGDNTCKILCNALATVTK 283
+C EG+ ++L +ALAT K
Sbjct: 56 RCTAEGNELKRVLPDALATDCK 77
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 402 SQSEILRKSSCLSGLRMGRY 461
S++ +L + C+S R GR+
Sbjct: 41 SRNRVLLRGQCISSRRNGRH 60
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,578
Number of Sequences: 438
Number of extensions: 2848
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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