Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15k02
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK091508-1|BAC03679.1| 239|Homo sapiens protein ( Homo sapiens ... 33 0.91
BC131515-1|AAI31516.1| 632|Homo sapiens GOLGA6 protein protein. 33 1.6
AF266285-1|AAF72535.1| 693|Homo sapiens golgin-like protein pro... 33 1.6
AF263742-1|AAF72196.1| 693|Homo sapiens golgin-like protein pro... 33 1.6
BC150329-1|AAI50330.1| 636|Homo sapiens GOLGA8A protein protein. 31 3.7
BC104800-1|AAI04801.1| 603|Homo sapiens golgi autoantigen, golg... 31 3.7
BC093673-1|AAH93673.1| 603|Homo sapiens golgi autoantigen, golg... 31 3.7
AF204231-1|AAF28463.1| 631|Homo sapiens 88-kDa Golgi protein pr... 31 3.7
AF163441-1|AAF34136.1| 460|Homo sapiens golgin 67 protein. 31 3.7
AB020662-1|BAA74878.1| 632|Homo sapiens KIAA0855 protein protein. 31 3.7
X16105-1|CAA34231.1| 325|Homo sapiens protein ( Human mRNA for ... 31 4.9
M33231-1|AAA36308.1| 382|Homo sapiens protein ( Human MHC class... 31 4.9
L03411-1|AAC37523.1| 380|Homo sapiens RD protein protein. 31 4.9
BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet coiled-... 31 4.9
BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet coiled-... 31 4.9
BX005143-11|CAM25867.1| 294|Homo sapiens RD RNA binding protein... 31 4.9
BX005143-10|CAM25866.1| 334|Homo sapiens RD RNA binding protein... 31 4.9
BX005143-9|CAM25865.1| 380|Homo sapiens RD RNA binding protein ... 31 4.9
BC126912-1|AAI26913.1| 1132|Homo sapiens CROCC protein protein. 31 4.9
BC126911-1|AAI26912.1| 1132|Homo sapiens CROCC protein protein. 31 4.9
BC108668-1|AAI08669.1| 477|Homo sapiens TSC1 protein protein. 31 4.9
BC050617-1|AAH50617.1| 380|Homo sapiens RD RNA binding protein ... 31 4.9
BC025235-1|AAH25235.1| 380|Homo sapiens RD RNA binding protein ... 31 4.9
AL844853-13|CAI41861.1| 380|Homo sapiens RD RNA binding protein... 31 4.9
AL662849-9|CAM24861.1| 294|Homo sapiens RD RNA binding protein ... 31 4.9
AL662849-8|CAM24860.1| 334|Homo sapiens RD RNA binding protein ... 31 4.9
AL662849-7|CAI17457.1| 380|Homo sapiens RD RNA binding protein ... 31 4.9
AL645922-10|CAM25397.1| 294|Homo sapiens RD RNA binding protein... 31 4.9
AL645922-9|CAM25396.1| 334|Homo sapiens RD RNA binding protein ... 31 4.9
AL645922-8|CAI41728.1| 380|Homo sapiens RD RNA binding protein ... 31 4.9
AL445645-4|CAH72112.1| 1164|Homo sapiens tuberous sclerosis 1 pr... 31 4.9
AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet coiled-... 31 4.9
AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet coiled-... 31 4.9
AF164622-1|AAF40308.1| 459|Homo sapiens golgin-67 protein. 31 4.9
AF019413-7|AAB67979.1| 380|Homo sapiens RD protein. 31 4.9
AF013168-1|AAC51674.1| 1164|Homo sapiens hamartin protein. 31 4.9
AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein. 31 4.9
U15172-1|AAC00020.1| 228|Homo sapiens BCL2/adenovirus E1B 19kD-... 31 6.4
DQ309037-1|ABD73921.1| 430|Homo sapiens golgin-like hypothetica... 31 6.4
BC032229-1|AAH32229.1| 894|Homo sapiens AXL receptor tyrosine k... 31 6.4
BC010959-1|AAH10959.1| 228|Homo sapiens BCL2/adenovirus E1B 19k... 31 6.4
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr... 31 6.4
AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein pr... 31 6.4
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c... 31 6.4
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c... 31 6.4
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c... 31 6.4
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c... 31 6.4
X57019-1|CAA40338.1| 894|Homo sapiens protein ( H.sapiens mRNA ... 30 8.5
S65125-1|AAB20305.1| 894|Homo sapiens UFO protein. 30 8.5
BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil do... 30 8.5
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 30 8.5
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 30 8.5
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 30 8.5
AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein. 30 8.5
AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor, argini... 30 8.5
AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein. 30 8.5
>AK091508-1|BAC03679.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ34189 fis, clone FCBBF3017535. ).
Length = 239
Score = 33.5 bits (73), Expect = 0.91
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -2
Query: 652 DRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVH 545
DR RGR+ ERE R E +R+R+ L R VG R H
Sbjct: 74 DRKRGRRKEREGR-EGERERERLKRETVVGTQTRTH 108
>BC131515-1|AAI31516.1| 632|Homo sapiens GOLGA6 protein protein.
Length = 632
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -3
Query: 792 EPSTAESGAQLTALIDKYNKLNNKLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRA 613
E E AQ ++ + N +L E ++ L+ ER+R+Q+ RL+ E +R+ R
Sbjct: 343 EEMLREQEAQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERL 402
Query: 612 RK 607
+K
Sbjct: 403 QK 404
>AF266285-1|AAF72535.1| 693|Homo sapiens golgin-like protein
protein.
Length = 693
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -3
Query: 792 EPSTAESGAQLTALIDKYNKLNNKLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRA 613
E E AQ ++ + N +L E ++ L+ ER+R+Q+ RL+ E +R+ R
Sbjct: 343 EEMLREQEAQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERL 402
Query: 612 RK 607
+K
Sbjct: 403 QK 404
>AF263742-1|AAF72196.1| 693|Homo sapiens golgin-like protein
protein.
Length = 693
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -3
Query: 792 EPSTAESGAQLTALIDKYNKLNNKLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRA 613
E E AQ ++ + N +L E ++ L+ ER+R+Q+ RL+ E +R+ R
Sbjct: 343 EEMLREQEAQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERL 402
Query: 612 RK 607
+K
Sbjct: 403 QK 404
>BC150329-1|AAI50330.1| 636|Homo sapiens GOLGA8A protein protein.
Length = 636
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = -3
Query: 687 RERMRRQQDRLQTAREVVRQNANRARKLIDNETD 586
+ER+R Q++RLQ +E +R+ R ++L + ++D
Sbjct: 365 KERLREQEERLQEQQERLREREKRLQQLAEPQSD 398
>BC104800-1|AAI04801.1| 603|Homo sapiens golgi autoantigen, golgin
subfamily a, 8A protein.
Length = 603
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = -3
Query: 687 RERMRRQQDRLQTAREVVRQNANRARKLIDNETD 586
+ER+R Q++RLQ +E +R+ R ++L + ++D
Sbjct: 332 KERLREQEERLQEQQERLREQEKRLQQLAEPQSD 365
>BC093673-1|AAH93673.1| 603|Homo sapiens golgi autoantigen, golgin
subfamily a, 8A protein.
Length = 603
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = -3
Query: 687 RERMRRQQDRLQTAREVVRQNANRARKLIDNETD 586
+ER+R Q++RLQ +E +R+ R ++L + ++D
Sbjct: 332 KERLREQEERLQEQQERLREQEKRLQQLAEPQSD 365
>AF204231-1|AAF28463.1| 631|Homo sapiens 88-kDa Golgi protein
protein.
Length = 631
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = -3
Query: 687 RERMRRQQDRLQTAREVVRQNANRARKLIDNETD 586
+ER+R Q++RLQ +E +R+ R ++L + ++D
Sbjct: 360 KERLREQEERLQEQQERLREREKRLQQLAEPQSD 393
>AF163441-1|AAF34136.1| 460|Homo sapiens golgin 67 protein.
Length = 460
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = -3
Query: 687 RERMRRQQDRLQTAREVVRQNANRARKLIDNETD 586
+ER+R Q++RLQ +E +R+ R ++L + ++D
Sbjct: 189 KERLREQEERLQEQQERLREQEKRLQQLAEPQSD 222
>AB020662-1|BAA74878.1| 632|Homo sapiens KIAA0855 protein protein.
Length = 632
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = -3
Query: 687 RERMRRQQDRLQTAREVVRQNANRARKLIDNETD 586
+ER+R Q++RLQ +E +R+ R ++L + ++D
Sbjct: 361 KERLREQEERLQEQQERLREREKRLQQLAEPQSD 394
>X16105-1|CAA34231.1| 325|Homo sapiens protein ( Human mRNA for RD
protein, RNA-binding. ).
Length = 325
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 151 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 204
>M33231-1|AAA36308.1| 382|Homo sapiens protein ( Human MHC class
III HLA-RD gene, exon 11. ).
Length = 382
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 207 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 260
>L03411-1|AAC37523.1| 380|Homo sapiens RD protein protein.
Length = 380
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 206 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 259
>BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet
coiled-coil, rootletin protein.
Length = 1898
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = -3
Query: 723 KLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKLID 598
+L + + L+ +E +RRQ+DRL+ +E Q+ R R+ ++
Sbjct: 502 ELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELE 543
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -3
Query: 795 LEPSTAESGAQLTALIDKYNKLNNKLNEVEQDLEIGRERMRRQQDRLQTAREV 637
+E A+S A+ L KYN ++ + E QDLE R+ +Q R + +V
Sbjct: 64 VEDLLAQSRAERDELAIKYNAVSERDTEHSQDLESALIRLEEEQQRSASLAQV 116
>BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet
coiled-coil, rootletin protein.
Length = 2017
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = -3
Query: 723 KLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKLID 598
+L + + L+ +E +RRQ+DRL+ +E Q+ R R+ ++
Sbjct: 621 ELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELE 662
>BX005143-11|CAM25867.1| 294|Homo sapiens RD RNA binding protein
protein.
Length = 294
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 206 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 259
>BX005143-10|CAM25866.1| 334|Homo sapiens RD RNA binding protein
protein.
Length = 334
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 201 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 254
>BX005143-9|CAM25865.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 206 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 259
>BC126912-1|AAI26913.1| 1132|Homo sapiens CROCC protein protein.
Length = 1132
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = -3
Query: 723 KLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKLID 598
+L + + L+ +E +RRQ+DRL+ +E Q+ R R+ ++
Sbjct: 484 ELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELE 525
>BC126911-1|AAI26912.1| 1132|Homo sapiens CROCC protein protein.
Length = 1132
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = -3
Query: 723 KLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKLID 598
+L + + L+ +E +RRQ+DRL+ +E Q+ R R+ ++
Sbjct: 484 ELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELE 525
>BC108668-1|AAI08669.1| 477|Homo sapiens TSC1 protein protein.
Length = 477
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 296 PLATLTPLREDSEELDSTEPSISRRDSLATDVGSD 400
P AT+TP R++ E +DS P + R+ L D GS+
Sbjct: 411 PQATVTPPRKE-ERMDSARPCLHRQHHLLNDRGSE 444
>BC050617-1|AAH50617.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 206 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 259
>BC025235-1|AAH25235.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 206 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 259
>AL844853-13|CAI41861.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 206 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 259
>AL662849-9|CAM24861.1| 294|Homo sapiens RD RNA binding protein
protein.
Length = 294
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 206 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 259
>AL662849-8|CAM24860.1| 334|Homo sapiens RD RNA binding protein
protein.
Length = 334
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 201 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 254
>AL662849-7|CAI17457.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 206 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 259
>AL645922-10|CAM25397.1| 294|Homo sapiens RD RNA binding protein
protein.
Length = 294
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 206 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 259
>AL645922-9|CAM25396.1| 334|Homo sapiens RD RNA binding protein
protein.
Length = 334
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 201 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 254
>AL645922-8|CAI41728.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 206 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 259
>AL445645-4|CAH72112.1| 1164|Homo sapiens tuberous sclerosis 1
protein.
Length = 1164
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 296 PLATLTPLREDSEELDSTEPSISRRDSLATDVGSD 400
P AT+TP R++ E +DS P + R+ L D GS+
Sbjct: 412 PQATVTPPRKE-ERMDSARPCLHRQHHLLNDRGSE 445
>AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet
coiled-coil, rootletin protein.
Length = 1898
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = -3
Query: 723 KLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKLID 598
+L + + L+ +E +RRQ+DRL+ +E Q+ R R+ ++
Sbjct: 502 ELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELE 543
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -3
Query: 795 LEPSTAESGAQLTALIDKYNKLNNKLNEVEQDLEIGRERMRRQQDRLQTAREV 637
+E A+S A+ L KYN ++ + E QDLE R+ +Q R + +V
Sbjct: 64 VEDLLAQSRAERDELAIKYNAVSERDTEHSQDLESALIRLEEEQQRSASLAQV 116
>AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet
coiled-coil, rootletin protein.
Length = 2017
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = -3
Query: 723 KLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKLID 598
+L + + L+ +E +RRQ+DRL+ +E Q+ R R+ ++
Sbjct: 621 ELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELE 662
>AF164622-1|AAF40308.1| 459|Homo sapiens golgin-67 protein.
Length = 459
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = -3
Query: 687 RERMRRQQDRLQTAREVVRQNANRARKLIDNETD 586
+ER+R Q++RLQ +E +R+ R ++L + ++D
Sbjct: 189 KERLREQEERLQEQQERLREQEKRLQQLSEPQSD 222
>AF019413-7|AAB67979.1| 380|Homo sapiens RD protein.
Length = 380
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRDGLARLPDVGVDPRVHR 542
R RDR R DR R R+ +R+ + DR R+G R D + R R
Sbjct: 206 RDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPR 259
>AF013168-1|AAC51674.1| 1164|Homo sapiens hamartin protein.
Length = 1164
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 296 PLATLTPLREDSEELDSTEPSISRRDSLATDVGSD 400
P AT+TP R++ E +DS P + R+ L D GS+
Sbjct: 412 PQATVTPPRKE-ERMDSARPCLHRQHHLLNDRGSE 445
>AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein.
Length = 1919
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = -3
Query: 723 KLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKLID 598
+L + + L+ +E +RRQ+DRL+ +E Q+ R R+ ++
Sbjct: 523 ELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELE 564
>U15172-1|AAC00020.1| 228|Homo sapiens BCL2/adenovirus E1B
19kD-interacting protein 1 protein.
Length = 228
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/61 (19%), Positives = 34/61 (55%)
Frame = -3
Query: 762 LTALIDKYNKLNNKLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKLIDNETDW 583
L+AL + K+ K ++ ++ E++ ++QD+ + ++++ N ++++ N+ W
Sbjct: 37 LSALTELNTKVKEKFQQLRHRIQ-DLEQLAKEQDKESEKQLLLQEVENHKKQMLSNQASW 95
Query: 582 R 580
R
Sbjct: 96 R 96
>DQ309037-1|ABD73921.1| 430|Homo sapiens golgin-like hypothetical
protein isoform I protein.
Length = 430
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/55 (29%), Positives = 33/55 (60%)
Frame = -3
Query: 744 KYNKLNNKLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKLIDNETDWR 580
+YN+ + LNE + +ER+R Q++RLQ +E +R+ R ++L + + ++
Sbjct: 122 EYNQRISLLNEGQ------KERLREQEERLQEQQERLREQEERLQQLAEPQNSFK 170
>BC032229-1|AAH32229.1| 894|Homo sapiens AXL receptor tyrosine
kinase protein.
Length = 894
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 126 WRMGLAQPLQQSLPFPMSPPAGTPWNVVLV 215
WR G AQP+ Q + P +P PW VL+
Sbjct: 426 WRPGQAQPVHQLVKEPSTPAFSWPWWYVLL 455
>BC010959-1|AAH10959.1| 228|Homo sapiens BCL2/adenovirus E1B 19kDa
interacting protein 1 protein.
Length = 228
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/61 (19%), Positives = 34/61 (55%)
Frame = -3
Query: 762 LTALIDKYNKLNNKLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKLIDNETDW 583
L+AL + K+ K ++ ++ E++ ++QD+ + ++++ N ++++ N+ W
Sbjct: 37 LSALTELNTKVKEKFQQLRHRIQ-DLEQLAKEQDKESEKQLLLQEVENHKKQMLSNQASW 95
Query: 582 R 580
R
Sbjct: 96 R 96
>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
protein.
Length = 1564
Score = 30.7 bits (66), Expect = 6.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRD 590
R R+R+R +R R R+ ERE E DR+RD
Sbjct: 691 RERERERDREREKERELERERAREREREREKERDRERD 728
>AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein
protein.
Length = 796
Score = 30.7 bits (66), Expect = 6.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRD 590
R R+R+R +R R R+ ERE E DR+RD
Sbjct: 516 RERERERDREREKERELERERAREREREREKERDRERD 553
>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 30.7 bits (66), Expect = 6.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRD 590
R R+R+R +R R R+ ERE E DR+RD
Sbjct: 691 RERERERDREREKERELERERAREREREREKERDRERD 728
>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 30.7 bits (66), Expect = 6.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRD 590
R R+R+R +R R R+ ERE E DR+RD
Sbjct: 691 RERERERDREREKERELERERAREREREREKERDRERD 728
>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 30.7 bits (66), Expect = 6.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRD 590
R R+R+R +R R R+ ERE E DR+RD
Sbjct: 691 RERERERDREREKERELERERAREREREREKERDRERD 728
>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 30.7 bits (66), Expect = 6.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRD 590
R R+R+R +R R R+ ERE E DR+RD
Sbjct: 691 RERERERDREREKERELERERAREREREREKERDRERD 728
>X57019-1|CAA40338.1| 894|Homo sapiens protein ( H.sapiens mRNA for
tyrosine kinase receptor. ).
Length = 894
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 126 WRMGLAQPLQQSLPFPMSPPAGTPWNVVLV 215
WR G AQP+ Q + P +P PW VL+
Sbjct: 426 WRPGEAQPVHQLVKEPSTPAFSWPWWYVLL 455
>S65125-1|AAB20305.1| 894|Homo sapiens UFO protein.
Length = 894
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 126 WRMGLAQPLQQSLPFPMSPPAGTPWNVVLV 215
WR G AQP+ Q + P +P PW VL+
Sbjct: 426 WRPGEAQPVHQLVKEPSTPAFSWPWWYVLL 455
>BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil domain
containing 2 protein.
Length = 1583
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = -3
Query: 753 LIDKYNKLNNKLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKL 604
L K NNK+ ++EQ+++I +++ Q+ + + + V+Q + K+
Sbjct: 1071 LNQKLTNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKI 1120
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRD 590
R R+++R G + DR + R+ +RE E DR+R+
Sbjct: 283 REREKEREKEKERGKNKDRDKEREKDREKDKEKDRERE 320
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRD 590
R R+++R G + DR + R+ +RE E DR+R+
Sbjct: 283 REREKEREKEKERGKNKDRDKEREKDREKDKEKDRERE 320
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRD 590
R R+++R G + DR + R+ +RE E DR+R+
Sbjct: 283 REREKEREKEKERGKNKDRDKEREKDREKDKEKDRERE 320
>AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein.
Length = 1583
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = -3
Query: 753 LIDKYNKLNNKLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKL 604
L K NNK+ ++EQ+++I +++ Q+ + + + V+Q + K+
Sbjct: 1071 LNQKLTNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKI 1120
>AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor,
arginine/serine-rich 12 variant protein.
Length = 206
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 703 RFRDRQRAHAPPAGPSADRPRGRQTEREPRAETDRQRD 590
R R+++R G + DR + R+ +RE E DR+R+
Sbjct: 74 REREKEREKEKERGKNKDRDKEREKDREKDKEKDRERE 111
>AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein.
Length = 1635
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = -3
Query: 753 LIDKYNKLNNKLNEVEQDLEIGRERMRRQQDRLQTAREVVRQNANRARKL 604
L K NNK+ ++EQ+++I +++ Q+ + + + V+Q + K+
Sbjct: 1123 LNQKLTNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKI 1172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,283,885
Number of Sequences: 237096
Number of extensions: 1826271
Number of successful extensions: 13156
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 11539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12944
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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