Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15j05
(841 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029385-1|AAH29385.1| 450|Homo sapiens CEP57 protein protein. 34 0.74
BC001233-1|AAH01233.1| 500|Homo sapiens centrosomal protein 57k... 34 0.74
AY239292-1|AAP72184.1| 500|Homo sapiens proliferation-inducing ... 34 0.74
AY225092-1|AAO73938.1| 500|Homo sapiens translokin protein. 34 0.74
BC038294-1|AAH38294.1| 303|Homo sapiens C10orf46 protein protein. 31 3.9
AY743663-1|AAU89709.1| 306|Homo sapiens cullin protein. 31 3.9
AL139407-1|CAH73727.1| 246|Homo sapiens chromosome 10 open read... 31 3.9
AK097728-1|BAC05153.1| 246|Homo sapiens protein ( Homo sapiens ... 31 3.9
AJ544771-1|CAD67614.1| 369|Homo sapiens hypothetical protein pr... 31 3.9
BC065495-1|AAH65495.1| 923|Homo sapiens KIAA1967 protein. 31 5.2
BC018269-1|AAH18269.1| 365|Homo sapiens KIAA1967 protein protein. 31 5.2
AK096547-1|BAC04814.1| 358|Homo sapiens protein ( Homo sapiens ... 31 5.2
AK022661-1|BAB14163.1| 365|Homo sapiens protein ( Homo sapiens ... 31 5.2
AB075847-1|BAB85553.1| 818|Homo sapiens KIAA1967 protein protein. 31 5.2
L02785-1|AAA58443.1| 764|Homo sapiens DRA protein. 31 6.9
BC025671-1|AAH25671.1| 764|Homo sapiens solute carrier family 2... 31 6.9
AC002467-3|AAB88772.1| 327|Homo sapiens unknown protein. 31 6.9
AY682083-1|AAT85832.1| 542|Homo sapiens voltage-gated sodium ch... 30 9.1
AY682082-1|AAT85831.1| 542|Homo sapiens voltage-gated sodium ch... 30 9.1
AY682081-1|AAT85830.1| 531|Homo sapiens voltage-gated sodium ch... 30 9.1
AL162458-1|CAH74052.1| 579|Homo sapiens nuclear receptor coacti... 30 9.1
AL035662-2|CAI42972.1| 579|Homo sapiens nuclear receptor coacti... 30 9.1
AL035662-1|CAI42971.1| 104|Homo sapiens nuclear receptor coacti... 30 9.1
AF470686-1|AAO33457.1| 579|Homo sapiens estrogen receptor coact... 30 9.1
AF230533-1|AAG36793.1| 621|Homo sapiens nuclear receptor coacti... 30 9.1
AF050736-1|AAD15789.1| 1980|Homo sapiens voltage-gated sodium ch... 30 9.1
AB046857-1|BAB13463.1| 479|Homo sapiens KIAA1637 protein protein. 30 9.1
AB027567-1|BAA78033.1| 1980|Homo sapiens sodium channel protein. 30 9.1
>BC029385-1|AAH29385.1| 450|Homo sapiens CEP57 protein protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.74
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -2
Query: 699 NIPFIVSKSTAPSHNIGVNIQQVLNGLK 616
++PF+ KST+PSH + N+Q VL+ +K
Sbjct: 288 DMPFVAGKSTSPSHAVVANVQLVLHLMK 315
>BC001233-1|AAH01233.1| 500|Homo sapiens centrosomal protein 57kDa
protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.74
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -2
Query: 699 NIPFIVSKSTAPSHNIGVNIQQVLNGLK 616
++PF+ KST+PSH + N+Q VL+ +K
Sbjct: 288 DMPFVAGKSTSPSHAVVANVQLVLHLMK 315
>AY239292-1|AAP72184.1| 500|Homo sapiens proliferation-inducing
protein 8 protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.74
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -2
Query: 699 NIPFIVSKSTAPSHNIGVNIQQVLNGLK 616
++PF+ KST+PSH + N+Q VL+ +K
Sbjct: 288 DMPFVAGKSTSPSHAVVANVQLVLHLMK 315
>AY225092-1|AAO73938.1| 500|Homo sapiens translokin protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.74
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -2
Query: 699 NIPFIVSKSTAPSHNIGVNIQQVLNGLK 616
++PF+ KST+PSH + N+Q VL+ +K
Sbjct: 288 DMPFVAGKSTSPSHAVVANVQLVLHLMK 315
>BC038294-1|AAH38294.1| 303|Homo sapiens C10orf46 protein protein.
Length = 303
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -2
Query: 264 QSLAEYASLYREYEHIEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFKAS 94
QS +Y + YE I C+ + Q H EQ +L K++ + H+ +V KE +AS
Sbjct: 150 QSPGDYIPI--SYEQIYSCVYKCVCQQHSEQMYSDLIKKITN---HLERVSKELQAS 201
>AY743663-1|AAU89709.1| 306|Homo sapiens cullin protein.
Length = 306
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -2
Query: 264 QSLAEYASLYREYEHIEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFKAS 94
QS +Y + YE I C+ + Q H EQ +L K++ + H+ +V KE +AS
Sbjct: 150 QSPGDYIPI--SYEQIYSCVYKCVCQQHSEQMYSDLIKKITN---HLERVSKELQAS 201
>AL139407-1|CAH73727.1| 246|Homo sapiens chromosome 10 open reading
frame 46 protein.
Length = 246
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -2
Query: 264 QSLAEYASLYREYEHIEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFKAS 94
QS +Y + YE I C+ + Q H EQ +L K++ + H+ +V KE +AS
Sbjct: 27 QSPGDYIPI--SYEQIYSCVYKCVCQQHSEQMYSDLIKKITN---HLERVSKELQAS 78
>AK097728-1|BAC05153.1| 246|Homo sapiens protein ( Homo sapiens
cDNA FLJ40409 fis, clone TESTI2037723. ).
Length = 246
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -2
Query: 264 QSLAEYASLYREYEHIEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFKAS 94
QS +Y + YE I C+ + Q H EQ +L K++ + H+ +V KE +AS
Sbjct: 27 QSPGDYIPI--SYEQIYSCVYKCVCQQHSEQMYSDLIKKITN---HLERVSKELQAS 78
>AJ544771-1|CAD67614.1| 369|Homo sapiens hypothetical protein
protein.
Length = 369
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -2
Query: 264 QSLAEYASLYREYEHIEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFKAS 94
QS +Y + YE I C+ + Q H EQ +L K++ + H+ +V KE +AS
Sbjct: 150 QSPGDYIPI--SYEQIYSCVYKCVCQQHSEQMYSDLIKKITN---HLERVSKELQAS 201
>BC065495-1|AAH65495.1| 923|Homo sapiens KIAA1967 protein.
Length = 923
Score = 31.1 bits (67), Expect = 5.2
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 177 EQRKEELSKELASREEHIRK--VVKEFKASGDSEQPLRAS-ASTTEDG 43
E KEE +KE A++EE K VVKE K +E P S A EDG
Sbjct: 572 EPEKEEAAKEEATKEEEAIKEEVVKEPKDEAQNEGPATESEAPLKEDG 619
>BC018269-1|AAH18269.1| 365|Homo sapiens KIAA1967 protein protein.
Length = 365
Score = 31.1 bits (67), Expect = 5.2
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 177 EQRKEELSKELASREEHIRK--VVKEFKASGDSEQPLRAS-ASTTEDG 43
E KEE +KE A++EE K VVKE K +E P S A EDG
Sbjct: 14 EPEKEEAAKEEATKEEEAIKEEVVKEPKDEAQNEGPATESEAPLKEDG 61
>AK096547-1|BAC04814.1| 358|Homo sapiens protein ( Homo sapiens
cDNA FLJ39228 fis, clone OCBBF2007354, highly similar to
Homo sapiens p30 DBC mRNA. ).
Length = 358
Score = 31.1 bits (67), Expect = 5.2
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 177 EQRKEELSKELASREEHIRK--VVKEFKASGDSEQPLRAS-ASTTEDG 43
E KEE +KE A++EE K VVKE K +E P S A EDG
Sbjct: 247 EPEKEEAAKEEATKEEEAIKEEVVKEPKDEAQNEGPATESEAPLKEDG 294
>AK022661-1|BAB14163.1| 365|Homo sapiens protein ( Homo sapiens
cDNA FLJ12599 fis, clone NT2RM4001410. ).
Length = 365
Score = 31.1 bits (67), Expect = 5.2
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 177 EQRKEELSKELASREEHIRK--VVKEFKASGDSEQPLRAS-ASTTEDG 43
E KEE +KE A++EE K VVKE K +E P S A EDG
Sbjct: 14 EPEKEEAAKEEATKEEEAIKEEVVKEPKDEAQNEGPATESEAPLKEDG 61
>AB075847-1|BAB85553.1| 818|Homo sapiens KIAA1967 protein protein.
Length = 818
Score = 31.1 bits (67), Expect = 5.2
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 177 EQRKEELSKELASREEHIRK--VVKEFKASGDSEQPLRAS-ASTTEDG 43
E KEE +KE A++EE K VVKE K +E P S A EDG
Sbjct: 467 EPEKEEAAKEEATKEEEAIKEEVVKEPKDEAQNEGPATESEAPLKEDG 514
>L02785-1|AAA58443.1| 764|Homo sapiens DRA protein.
Length = 764
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 389 LGTIPSPSRYKFKSLLYDMYL*EGRRNIRCPSLITF 496
L I + YK K YDMY EG + RCPS I F
Sbjct: 511 LANIGRTNIYKNKKDYYDMYEPEGVKIFRCPSPIYF 546
>BC025671-1|AAH25671.1| 764|Homo sapiens solute carrier family 26,
member 3 protein.
Length = 764
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 389 LGTIPSPSRYKFKSLLYDMYL*EGRRNIRCPSLITF 496
L I + YK K YDMY EG + RCPS I F
Sbjct: 511 LANIGRTNIYKNKKDYYDMYEPEGVKIFRCPSPIYF 546
>AC002467-3|AAB88772.1| 327|Homo sapiens unknown protein.
Length = 327
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 389 LGTIPSPSRYKFKSLLYDMYL*EGRRNIRCPSLITF 496
L I + YK K YDMY EG + RCPS I F
Sbjct: 74 LANIGRTNIYKNKKDYYDMYEPEGVKIFRCPSPIYF 109
>AY682083-1|AAT85832.1| 542|Homo sapiens voltage-gated sodium
channel Nav1.6 protein.
Length = 542
Score = 30.3 bits (65), Expect = 9.1
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = -2
Query: 276 QEAKQSLAEYASLYREYEH-IEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFK 100
QE Q+ A S E IE+ +EG P +LS + A + RK K+ +
Sbjct: 293 QEEAQAAAMATSAGTVSEDAIEEEGEEGGGSPRSSSEISKLSSKSAKERRNRRKKRKQKE 352
Query: 99 ASGDSEQ--PLRASASTTEDGYRHSTFKL 19
S E+ P + S +EDG R F+L
Sbjct: 353 LSEGEEKGDPEKVFKSESEDGMRRKAFRL 381
>AY682082-1|AAT85831.1| 542|Homo sapiens voltage-gated sodium
channel Nav1.6 protein.
Length = 542
Score = 30.3 bits (65), Expect = 9.1
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = -2
Query: 276 QEAKQSLAEYASLYREYEH-IEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFK 100
QE Q+ A S E IE+ +EG P +LS + A + RK K+ +
Sbjct: 293 QEEAQAAAMATSAGTVSEDAIEEEGEEGGGSPRSSSEISKLSSKSAKERRNRRKKRKQKE 352
Query: 99 ASGDSEQ--PLRASASTTEDGYRHSTFKL 19
S E+ P + S +EDG R F+L
Sbjct: 353 LSEGEEKGDPEKVFKSESEDGMRRKAFRL 381
>AY682081-1|AAT85830.1| 531|Homo sapiens voltage-gated sodium
channel Nav1.6 protein.
Length = 531
Score = 30.3 bits (65), Expect = 9.1
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = -2
Query: 276 QEAKQSLAEYASLYREYEH-IEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFK 100
QE Q+ A S E IE+ +EG P +LS + A + RK K+ +
Sbjct: 293 QEEAQAAAMATSAGTVSEDAIEEEGEEGGGSPRSSSEISKLSSKSAKERRNRRKKRKQKE 352
Query: 99 ASGDSEQ--PLRASASTTEDGYRHSTFKL 19
S E+ P + S +EDG R F+L
Sbjct: 353 LSEGEEKGDPEKVFKSESEDGMRRKAFRL 381
>AL162458-1|CAH74052.1| 579|Homo sapiens nuclear receptor
coactivator 5 protein.
Length = 579
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 198 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 64
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 156 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 201
>AL035662-2|CAI42972.1| 579|Homo sapiens nuclear receptor
coactivator 5 protein.
Length = 579
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 198 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 64
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 156 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 201
>AL035662-1|CAI42971.1| 104|Homo sapiens nuclear receptor
coactivator 5 protein.
Length = 104
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 198 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 64
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 51 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 96
>AF470686-1|AAO33457.1| 579|Homo sapiens estrogen receptor
coactivator protein.
Length = 579
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 198 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 64
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 156 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 201
>AF230533-1|AAG36793.1| 621|Homo sapiens nuclear receptor
coactivator CIA protein.
Length = 621
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 198 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 64
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 198 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 243
>AF050736-1|AAD15789.1| 1980|Homo sapiens voltage-gated sodium
channel alpha subunit protein.
Length = 1980
Score = 30.3 bits (65), Expect = 9.1
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = -2
Query: 276 QEAKQSLAEYASLYREYEH-IEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFK 100
QE Q+ A S E IE+ +EG P +LS + A + RK K+ +
Sbjct: 443 QEEAQAAAMATSAGTVSEDAIEEEGEEGGGSPRSSSEISKLSSKSAKERRNRRKKRKQKE 502
Query: 99 ASGDSEQ--PLRASASTTEDGYRHSTFKL 19
S E+ P + S +EDG R F+L
Sbjct: 503 LSEGEEKGDPEKVFKSESEDGMRRKAFRL 531
>AB046857-1|BAB13463.1| 479|Homo sapiens KIAA1637 protein protein.
Length = 479
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 198 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 64
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 56 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 101
>AB027567-1|BAA78033.1| 1980|Homo sapiens sodium channel protein.
Length = 1980
Score = 30.3 bits (65), Expect = 9.1
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = -2
Query: 276 QEAKQSLAEYASLYREYEH-IEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFK 100
QE Q+ A S E IE+ +EG P +LS + A + RK K+ +
Sbjct: 443 QEEAQAAAMATSAGTVSEDAIEEEGEEGGGSPRSSSEISKLSSKSAKERRNRRKKRKQKE 502
Query: 99 ASGDSEQ--PLRASASTTEDGYRHSTFKL 19
S E+ P + S +EDG R F+L
Sbjct: 503 LSEGEEKGDPEKVFKSESEDGMRRKAFRL 531
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,608,368
Number of Sequences: 237096
Number of extensions: 2807075
Number of successful extensions: 9506
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9506
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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