Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15j01
         (262 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093847-1|AAH93847.1|   98|Homo sapiens keratin associated prot...    29   2.7  
BC093845-1|AAH93845.1|   98|Homo sapiens keratin associated prot...    29   2.7  
BC069448-1|AAH69448.1|   98|Homo sapiens keratin associated prot...    29   2.7  
BC069099-1|AAH69099.1|   98|Homo sapiens keratin associated prot...    29   2.7  
BC034582-1|AAH34582.1|   98|Homo sapiens keratin associated prot...    29   2.7  
AJ406933-1|CAC27572.1|   98|Homo sapiens keratin associated prot...    29   2.7  
AJ406932-1|CAC27571.1|   98|Homo sapiens keratin associated prot...    29   2.7  
AF294629-1|AAG23961.1|  410|Homo sapiens aristaless-like 4 protein.    29   2.7  
AB076348-1|BAD01535.1|  255|Homo sapiens keratin associated prot...    28   4.7  

>BC093847-1|AAH93847.1|   98|Homo sapiens keratin associated protein
           3-3 protein.
          Length = 98

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 123 CSGCPSPCNXXRNCTPXC 70
           C  CP PC+  + C P C
Sbjct: 48  CDNCPPPCHIPQPCVPTC 65


>BC093845-1|AAH93845.1|   98|Homo sapiens keratin associated protein
           3-3 protein.
          Length = 98

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 123 CSGCPSPCNXXRNCTPXC 70
           C  CP PC+  + C P C
Sbjct: 48  CDNCPPPCHIPQPCVPTC 65


>BC069448-1|AAH69448.1|   98|Homo sapiens keratin associated protein
           3-3 protein.
          Length = 98

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 123 CSGCPSPCNXXRNCTPXC 70
           C  CP PC+  + C P C
Sbjct: 48  CDNCPPPCHIPQPCVPTC 65


>BC069099-1|AAH69099.1|   98|Homo sapiens keratin associated protein
           3-3 protein.
          Length = 98

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 123 CSGCPSPCNXXRNCTPXC 70
           C  CP PC+  + C P C
Sbjct: 48  CDNCPPPCHIPQPCVPTC 65


>BC034582-1|AAH34582.1|   98|Homo sapiens keratin associated protein
           3-2 protein.
          Length = 98

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 123 CSGCPSPCNXXRNCTPXC 70
           C  CP PC+  + C P C
Sbjct: 48  CDNCPPPCHIPQPCVPTC 65


>AJ406933-1|CAC27572.1|   98|Homo sapiens keratin associated protein
           3.3 protein.
          Length = 98

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 123 CSGCPSPCNXXRNCTPXC 70
           C  CP PC+  + C P C
Sbjct: 48  CDNCPPPCHIPQPCVPTC 65


>AJ406932-1|CAC27571.1|   98|Homo sapiens keratin associated protein
           3.2 protein.
          Length = 98

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 123 CSGCPSPCNXXRNCTPXC 70
           C  CP PC+  + C P C
Sbjct: 48  CDNCPPPCHIPQPCVPTC 65


>AF294629-1|AAG23961.1|  410|Homo sapiens aristaless-like 4 protein.
          Length = 410

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 138 QLRGGCSGCPSPCNXXRNCTPXCSGGSLVTXYSQVA 31
           Q +  C   P  C    +C P CSG S VT +  V+
Sbjct: 317 QCQPACPLRPGACLHVPSCPPPCSGASSVTDFLSVS 352


>AB076348-1|BAD01535.1|  255|Homo sapiens keratin associated protein
           protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 123 CSGCPSPCNXXRNCTPXCSGGSLVTXYSQVA 31
           CSG  SPC    +C P C   S     S V+
Sbjct: 202 CSGASSPCCQQSSCQPACCTSSCCRPSSSVS 232


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,320,295
Number of Sequences: 237096
Number of extensions: 310733
Number of successful extensions: 952
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)