Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15h18
         (780 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111530-1|AAI11531.1| 1196|Homo sapiens CMYA5 protein protein.        31   3.5  
BC111529-1|AAI11530.1|  751|Homo sapiens CMYA5 protein protein.        31   3.5  
AL834252-1|CAD38928.2| 1332|Homo sapiens hypothetical protein pr...    31   3.5  
AL832368-1|CAD91158.1| 1163|Homo sapiens hypothetical protein pr...    31   3.5  
AL831968-1|CAD38609.2|  402|Homo sapiens hypothetical protein pr...    31   3.5  
AL831966-1|CAD38607.1| 1470|Homo sapiens hypothetical protein pr...    31   3.5  
AF533705-1|AAQ09018.1|  915|Homo sapiens unknown protein protein.      31   3.5  

>BC111530-1|AAI11531.1| 1196|Homo sapiens CMYA5 protein protein.
          Length = 1196

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 374  KKYIFDLNSLICPLHITERIMKIHLLFDENNQ 279
            ++Y F  + ++  +H+TER  ++ +L D NNQ
Sbjct: 1114 QRYTFFYSGIVSDVHVTERPARVGILLDYNNQ 1145


>BC111529-1|AAI11530.1|  751|Homo sapiens CMYA5 protein protein.
          Length = 751

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 374 KKYIFDLNSLICPLHITERIMKIHLLFDENNQ 279
           ++Y F  + ++  +H+TER  ++ +L D NNQ
Sbjct: 669 QRYTFFYSGIVSDVHVTERPARVGILLDYNNQ 700


>AL834252-1|CAD38928.2| 1332|Homo sapiens hypothetical protein
            protein.
          Length = 1332

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 374  KKYIFDLNSLICPLHITERIMKIHLLFDENNQ 279
            ++Y F  + ++  +H+TER  ++ +L D NNQ
Sbjct: 1250 QRYTFFYSGIVSDVHVTERPARVGILLDYNNQ 1281


>AL832368-1|CAD91158.1| 1163|Homo sapiens hypothetical protein
            protein.
          Length = 1163

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 374  KKYIFDLNSLICPLHITERIMKIHLLFDENNQ 279
            ++Y F  + ++  +H+TER  ++ +L D NNQ
Sbjct: 1081 QRYTFFYSGIVSDVHVTERPARVGILLDYNNQ 1112


>AL831968-1|CAD38609.2|  402|Homo sapiens hypothetical protein
           protein.
          Length = 402

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 374 KKYIFDLNSLICPLHITERIMKIHLLFDENNQ 279
           ++Y F  + ++  +H+TER  ++ +L D NNQ
Sbjct: 320 QRYTFFYSGIVSDVHVTERPARVGILLDYNNQ 351


>AL831966-1|CAD38607.1| 1470|Homo sapiens hypothetical protein
            protein.
          Length = 1470

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 374  KKYIFDLNSLICPLHITERIMKIHLLFDENNQ 279
            ++Y F  + ++  +H+TER  ++ +L D NNQ
Sbjct: 1388 QRYTFFYSGIVSDVHVTERPARVGILLDYNNQ 1419


>AF533705-1|AAQ09018.1|  915|Homo sapiens unknown protein protein.
          Length = 915

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 374 KKYIFDLNSLICPLHITERIMKIHLLFDENNQ 279
           ++Y F  + ++  +H+TER  ++ +L D NNQ
Sbjct: 833 QRYTFFYSGIVSDVHVTERPARVGILLDYNNQ 864


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,861,660
Number of Sequences: 237096
Number of extensions: 1806405
Number of successful extensions: 2123
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2123
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)