Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15h10
(266 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 1.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 1.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 2.6
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 2.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 3.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 4.6
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 20 4.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 20 6.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 20 6.1
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 19 8.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 19 8.0
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 1.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 191 SYAINYVNKY*NDCGTFYRKLF 126
+Y NY N Y N+ Y+KL+
Sbjct: 96 NYNNNYNNNYNNNYNNNYKKLY 117
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 1.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 191 SYAINYVNKY*NDCGTFYRKLF 126
+Y NY N Y N+ Y+KL+
Sbjct: 96 NYNNNYNNNYNNNYNNNYKKLY 117
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 2.6
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -1
Query: 131 LF*CYDNSTTCRQVKCSKIRLRLMLRPP 48
L+ Y N+ +V+C+ + L + PP
Sbjct: 686 LYKIYLNTMESHEVRCTAVFLLMKTNPP 713
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.0 bits (42), Expect = 2.6
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +3
Query: 24 NAIIIMHLWWSQHQP 68
N +I WW ++QP
Sbjct: 68 NIVIDKRPWWERYQP 82
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 3.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 191 SYAINYVNKY*NDCGTFYRKLF 126
+Y NY NKY + + +KL+
Sbjct: 95 NYKYNYNNKYNYNNNNYNKKLY 116
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.2 bits (40), Expect = 4.6
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 160 ETIAEHFIESCFNATITLPHVD 95
ETI + NAT L HVD
Sbjct: 303 ETIISSVFTTRHNATCYLSHVD 324
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 20.2 bits (40), Expect = 4.6
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 160 ETIAEHFIESCFNATITLPHVD 95
ETI + NAT L HVD
Sbjct: 9 ETIISSVFTTRHNATCYLSHVD 30
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 191 SYAINYVNKY*NDCGTFYRKL 129
+Y NY N Y N+ T Y+KL
Sbjct: 93 NYNNNY-NNYNNNYNTNYKKL 112
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 19.8 bits (39), Expect = 6.1
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 179 NYVNKY*NDCGTFY 138
NY N Y N+C Y
Sbjct: 342 NYNNNYNNNCKKLY 355
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 19.4 bits (38), Expect = 8.0
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 189 RTPHTKASFMRRNKKFKD 242
RTP T + KKF++
Sbjct: 13 RTPFTTQQLLSLEKKFRE 30
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 191 SYAINYVNKY*NDCGTFYRKL 129
+Y + N Y N+ T Y+KL
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKL 108
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 191 SYAINYVNKY*NDCGTFYRKL 129
+Y + N Y N+ T Y+KL
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKL 108
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 191 SYAINYVNKY*NDCGTFYRKL 129
+Y + N Y N+ T Y+KL
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKL 108
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 191 SYAINYVNKY*NDCGTFYRKL 129
+Y + N Y N+ T Y+KL
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKL 108
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 191 SYAINYVNKY*NDCGTFYRKL 129
+Y + N Y N+ T Y+KL
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKL 108
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 191 SYAINYVNKY*NDCGTFYRKL 129
+Y + N Y N+ T Y+KL
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKL 108
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 191 SYAINYVNKY*NDCGTFYRKL 129
+Y + N Y N+ T Y+KL
Sbjct: 88 NYKYSNYNNYNNNYNTNYKKL 108
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,528
Number of Sequences: 438
Number of extensions: 1219
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5012760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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