Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15h08
         (351 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.            28   9.5  
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote...    28   9.5  
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.     28   9.5  

>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
          Length = 2798

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 341  MCKRQMAPQTCALAVGTNVPVGPPKNFEYVIK 246
            +CK +   Q   +  G N+PV P   +EYV K
Sbjct: 2605 LCKEEGGGQVELIPNGVNIPVTPQNVYEYVRK 2636


>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
            protein.
          Length = 2799

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 341  MCKRQMAPQTCALAVGTNVPVGPPKNFEYVIK 246
            +CK +   Q   +  G N+PV P   +EYV K
Sbjct: 2606 LCKEEGGGQVELIPNGVNIPVTPQNVYEYVRK 2637


>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
          Length = 2820

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 341  MCKRQMAPQTCALAVGTNVPVGPPKNFEYVIK 246
            +CK +   Q   +  G N+PV P   +EYV K
Sbjct: 2627 LCKEEGGGQVELIPNGVNIPVTPQNVYEYVRK 2658


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,874,404
Number of Sequences: 237096
Number of extensions: 921956
Number of successful extensions: 1037
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)