Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15h05
(843 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D26579-1|BAA05626.1| 824|Homo sapiens transmembrane protein pro... 31 5.2
BC115404-1|AAI15405.1| 824|Homo sapiens ADAM8 protein protein. 31 5.2
AF191687-1|AAF05604.1| 270|Homo sapiens alanine-glyoxylate amin... 31 5.2
AY427820-1|AAR05120.1| 321|Homo sapiens G-protein coupled recep... 30 9.1
AJ583824-1|CAE47751.1| 1072|Homo sapiens ubiquitin specific prot... 30 9.1
AB154410-1|BAD20638.1| 321|Homo sapiens G protein-coupled recep... 30 9.1
AB083627-1|BAB89340.1| 321|Homo sapiens putative G-protein coup... 30 9.1
AB065786-1|BAC06005.1| 347|Homo sapiens seven transmembrane hel... 30 9.1
>D26579-1|BAA05626.1| 824|Homo sapiens transmembrane protein
protein.
Length = 824
Score = 31.1 bits (67), Expect = 5.2
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = -2
Query: 671 CKADCFNHGACTRPSGRYARTVWYPGECCPVV 576
C A C NHG C + W P C ++
Sbjct: 613 CSAQCHNHGVCNHKQECHCHAGWAPPHCAKLL 644
>BC115404-1|AAI15405.1| 824|Homo sapiens ADAM8 protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 5.2
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = -2
Query: 671 CKADCFNHGACTRPSGRYARTVWYPGECCPVV 576
C A C NHG C + W P C ++
Sbjct: 613 CSAQCHNHGVCNHKQECHCHAGWAPPHCAKLL 644
>AF191687-1|AAF05604.1| 270|Homo sapiens alanine-glyoxylate
aminotransferase homolog protein.
Length = 270
Score = 31.1 bits (67), Expect = 5.2
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = -2
Query: 836 GPIARYGYVTAESSIYNKRPRC-----GQPRPQPHQRETTAYCGGPSNVPLE 696
G R +E S + RPRC G PRP P Q +T G P+ P E
Sbjct: 80 GATGRPPLCLSEPSSVSPRPRCFLLPWGSPRPCPRQSQTGGSRGSPAPRPAE 131
>AY427820-1|AAR05120.1| 321|Homo sapiens G-protein coupled receptor
protein.
Length = 321
Score = 30.3 bits (65), Expect = 9.1
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = -3
Query: 562 PSLAQIHLTIHVVTIRATDMCKRKSAQTCVSLMSCLCDRLVCYLR---FWVSLC*HSLKQ 392
P + LT+ V R++ +R+ + V +++ + L+C L +W L SL
Sbjct: 192 PVMTLSSLTLFVWVRRSSQQWRRQPTRLFVVVLASVLVFLICSLPLSIYWFVLYWLSLPP 251
Query: 391 KLNMFVFLFTLLKESRMTLSNPLVFSLM 308
++ + F + L S + +NP+++ L+
Sbjct: 252 EMQVLCFSLSRLSSSVSSSANPVIYFLV 279
>AJ583824-1|CAE47751.1| 1072|Homo sapiens ubiquitin specific
proteinase 53 protein.
Length = 1072
Score = 30.3 bits (65), Expect = 9.1
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -3
Query: 646 ALAQGPVVDTHVLFGIQENAARWFFPVKPSLAQIHLTIHVVTIRATDMCKRKSAQTCVSL 467
ALA+ + G+ ++AA F + L +IH H+V R DMC KS T
Sbjct: 101 ALAESFKDEQRFQLGLMDDAAECF---ENMLERIHF--HIVPSRDADMCTSKSCITHQKF 155
Query: 466 MSCLCDRLVC 437
L ++ VC
Sbjct: 156 AMTLYEQCVC 165
>AB154410-1|BAD20638.1| 321|Homo sapiens G protein-coupled receptor
TGR7 protein.
Length = 321
Score = 30.3 bits (65), Expect = 9.1
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = -3
Query: 562 PSLAQIHLTIHVVTIRATDMCKRKSAQTCVSLMSCLCDRLVCYLR---FWVSLC*HSLKQ 392
P + LT+ V R++ +R+ + V +++ + L+C L +W L SL
Sbjct: 192 PVMTLSSLTLFVWVRRSSQQWRRQPTRLFVVVLASVLVFLICSLPLSIYWFVLYWLSLPP 251
Query: 391 KLNMFVFLFTLLKESRMTLSNPLVFSLM 308
++ + F + L S + +NP+++ L+
Sbjct: 252 EMQVLCFSLSRLSSSVSSSANPVIYFLV 279
>AB083627-1|BAB89340.1| 321|Homo sapiens putative G-protein coupled
receptor protein.
Length = 321
Score = 30.3 bits (65), Expect = 9.1
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = -3
Query: 562 PSLAQIHLTIHVVTIRATDMCKRKSAQTCVSLMSCLCDRLVCYLR---FWVSLC*HSLKQ 392
P + LT+ V R++ +R+ + V +++ + L+C L +W L SL
Sbjct: 192 PVMTLSSLTLFVWVRRSSQQWRRQPTRLFVVVLASVLVFLICSLPLSIYWFVLYWLSLPP 251
Query: 391 KLNMFVFLFTLLKESRMTLSNPLVFSLM 308
++ + F + L S + +NP+++ L+
Sbjct: 252 EMQVLCFSLSRLSSSVSSSANPVIYFLV 279
>AB065786-1|BAC06005.1| 347|Homo sapiens seven transmembrane helix
receptor protein.
Length = 347
Score = 30.3 bits (65), Expect = 9.1
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = -3
Query: 562 PSLAQIHLTIHVVTIRATDMCKRKSAQTCVSLMSCLCDRLVCYLR---FWVSLC*HSLKQ 392
P + LT+ V R++ +R+ + V +++ + L+C L +W L SL
Sbjct: 218 PVMTLSSLTLFVWVRRSSQQWRRQPTRLFVVVLASVLVFLICSLPLSIYWFVLYWLSLPP 277
Query: 391 KLNMFVFLFTLLKESRMTLSNPLVFSLM 308
++ + F + L S + +NP+++ L+
Sbjct: 278 EMQVLCFSLSRLSSSVSSSANPVIYFLV 305
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,670,868
Number of Sequences: 237096
Number of extensions: 2619592
Number of successful extensions: 5706
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5699
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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