Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15g04
(839 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001078-1|AAH01078.2| 319|Homo sapiens ANKRD6 protein protein. 32 2.3
U50133-1|AAB47805.1| 1856|Homo sapiens ankyrin protein. 32 3.0
BC042173-1|AAH42173.1| 722|Homo sapiens ankyrin repeat domain 6... 32 3.0
AL159174-2|CAI39610.1| 640|Homo sapiens ankyrin repeat domain 6... 32 3.0
AL159174-1|CAI39609.1| 692|Homo sapiens ankyrin repeat domain 6... 32 3.0
AL117504-1|CAB55968.1| 641|Homo sapiens hypothetical protein pr... 32 3.0
AL096678-3|CAI42281.1| 640|Homo sapiens ankyrin repeat domain 6... 32 3.0
AL096678-2|CAI42280.1| 692|Homo sapiens ankyrin repeat domain 6... 32 3.0
AB209418-1|BAD92655.1| 1899|Homo sapiens ankyrin 1 isoform 4 var... 32 3.0
AB023174-1|BAA76801.2| 693|Homo sapiens KIAA0957 protein protein. 32 3.0
>BC001078-1|AAH01078.2| 319|Homo sapiens ANKRD6 protein protein.
Length = 319
Score = 32.3 bits (70), Expect = 2.3
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = -1
Query: 761 SEFQKSLDPT-SNVTATLEDIRDLKKTS--EIENDINEVKKNIDNVPFVDLNIESKNITN 591
++ + L+ T + A L ++D T ++EN + +D + L+ E N
Sbjct: 11 NKLENQLEATVEEIKAELGSVQDKMNTKLGQMENKTQHQMRVLDKLMVERLSAERTECLN 70
Query: 590 VVNIAQNNVHYHHGERTNIKREFDIKTWCTELEQGYKNLELWNLWISNACEA 435
+ ++ H GE+ I ++KTWC Q NLE S AC A
Sbjct: 71 RLQ-QHSDTEKHEGEKRQISLVDELKTWCMLKIQ---NLEQKPSGDSRACRA 118
>U50133-1|AAB47805.1| 1856|Homo sapiens ankyrin protein.
Length = 1856
Score = 31.9 bits (69), Expect = 3.0
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = -1
Query: 734 TSNVTATLEDIRDLKKTSEIENDINEVKKNIDNVPFVDLNIESKNITNVVNIAQNNVHYH 555
T+++T E++ K D++E K+ +D VP +D +ES I + V
Sbjct: 789 TAHITIMGEELISFKAERRDSRDVDEEKELLDFVPKLDQVVESPAIPRIPCAMPETVVIR 848
Query: 554 HGERTNIKREFD 519
E+ +E+D
Sbjct: 849 SEEQEQASKEYD 860
>BC042173-1|AAH42173.1| 722|Homo sapiens ankyrin repeat domain 6
protein.
Length = 722
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = -1
Query: 761 SEFQKSLDPT-SNVTATLEDIRDLKKTS--EIENDINEVKKNIDNVPFVDLNIESKNITN 591
++ + L+ T + A L ++D T ++EN + +D + L+ E N
Sbjct: 419 NKLENQLEATVEEIKAELGSVQDKMNTKLGQMENKTQHQMRVLDKLMVERLSAERTECLN 478
Query: 590 VVNIAQNNVHYHHGERTNIKREFDIKTWCTELEQGYKNLELWNLWISNACEA 435
+ ++ H GE+ I ++KTWC Q NLE S AC A
Sbjct: 479 RLQ-QHSDTEKHEGEKRQISLVDELKTWCMLKIQ---NLEQKLSGDSRACRA 526
>AL159174-2|CAI39610.1| 640|Homo sapiens ankyrin repeat domain 6
protein.
Length = 640
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = -1
Query: 761 SEFQKSLDPT-SNVTATLEDIRDLKKTS--EIENDINEVKKNIDNVPFVDLNIESKNITN 591
++ + L+ T + A L ++D T ++EN + +D + L+ E N
Sbjct: 332 NKLENQLEATVEEIKAELGSVQDKMNTKLGQMENKTQHQMRVLDKLMVERLSAERTECLN 391
Query: 590 VVNIAQNNVHYHHGERTNIKREFDIKTWCTELEQGYKNLELWNLWISNACEA 435
+ ++ H GE+ I ++KTWC Q NLE S AC A
Sbjct: 392 RLQ-QHSDTEKHEGEKRQISLVDELKTWCMLKIQ---NLEQKLSGDSRACRA 439
>AL159174-1|CAI39609.1| 692|Homo sapiens ankyrin repeat domain 6
protein.
Length = 692
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = -1
Query: 761 SEFQKSLDPT-SNVTATLEDIRDLKKTS--EIENDINEVKKNIDNVPFVDLNIESKNITN 591
++ + L+ T + A L ++D T ++EN + +D + L+ E N
Sbjct: 384 NKLENQLEATVEEIKAELGSVQDKMNTKLGQMENKTQHQMRVLDKLMVERLSAERTECLN 443
Query: 590 VVNIAQNNVHYHHGERTNIKREFDIKTWCTELEQGYKNLELWNLWISNACEA 435
+ ++ H GE+ I ++KTWC Q NLE S AC A
Sbjct: 444 RLQ-QHSDTEKHEGEKRQISLVDELKTWCMLKIQ---NLEQKLSGDSRACRA 491
>AL117504-1|CAB55968.1| 641|Homo sapiens hypothetical protein
protein.
Length = 641
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = -1
Query: 761 SEFQKSLDPT-SNVTATLEDIRDLKKTS--EIENDINEVKKNIDNVPFVDLNIESKNITN 591
++ + L+ T + A L ++D T ++EN + +D + L+ E N
Sbjct: 333 NKLENQLEATVEEIKAELGSVQDKMNTKLGQMENKTQHQMRVLDKLMVERLSAERTECLN 392
Query: 590 VVNIAQNNVHYHHGERTNIKREFDIKTWCTELEQGYKNLELWNLWISNACEA 435
+ ++ H GE+ I ++KTWC Q NLE S AC A
Sbjct: 393 RLQ-QHSDTEKHEGEKRQISLVDELKTWCMLKIQ---NLEQKLSGDSRACRA 440
>AL096678-3|CAI42281.1| 640|Homo sapiens ankyrin repeat domain 6
protein.
Length = 640
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = -1
Query: 761 SEFQKSLDPT-SNVTATLEDIRDLKKTS--EIENDINEVKKNIDNVPFVDLNIESKNITN 591
++ + L+ T + A L ++D T ++EN + +D + L+ E N
Sbjct: 332 NKLENQLEATVEEIKAELGSVQDKMNTKLGQMENKTQHQMRVLDKLMVERLSAERTECLN 391
Query: 590 VVNIAQNNVHYHHGERTNIKREFDIKTWCTELEQGYKNLELWNLWISNACEA 435
+ ++ H GE+ I ++KTWC Q NLE S AC A
Sbjct: 392 RLQ-QHSDTEKHEGEKRQISLVDELKTWCMLKIQ---NLEQKLSGDSRACRA 439
>AL096678-2|CAI42280.1| 692|Homo sapiens ankyrin repeat domain 6
protein.
Length = 692
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = -1
Query: 761 SEFQKSLDPT-SNVTATLEDIRDLKKTS--EIENDINEVKKNIDNVPFVDLNIESKNITN 591
++ + L+ T + A L ++D T ++EN + +D + L+ E N
Sbjct: 384 NKLENQLEATVEEIKAELGSVQDKMNTKLGQMENKTQHQMRVLDKLMVERLSAERTECLN 443
Query: 590 VVNIAQNNVHYHHGERTNIKREFDIKTWCTELEQGYKNLELWNLWISNACEA 435
+ ++ H GE+ I ++KTWC Q NLE S AC A
Sbjct: 444 RLQ-QHSDTEKHEGEKRQISLVDELKTWCMLKIQ---NLEQKLSGDSRACRA 491
>AB209418-1|BAD92655.1| 1899|Homo sapiens ankyrin 1 isoform 4 variant
protein.
Length = 1899
Score = 31.9 bits (69), Expect = 3.0
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = -1
Query: 734 TSNVTATLEDIRDLKKTSEIENDINEVKKNIDNVPFVDLNIESKNITNVVNIAQNNVHYH 555
T+++T E++ K D++E K+ +D VP +D +ES I + V
Sbjct: 857 TAHITIMGEELISFKAERRDSRDVDEEKELLDFVPKLDQVVESPAIPRIPCAMPETVVIR 916
Query: 554 HGERTNIKREFD 519
E+ +E+D
Sbjct: 917 SEEQEQASKEYD 928
>AB023174-1|BAA76801.2| 693|Homo sapiens KIAA0957 protein protein.
Length = 693
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = -1
Query: 761 SEFQKSLDPT-SNVTATLEDIRDLKKTS--EIENDINEVKKNIDNVPFVDLNIESKNITN 591
++ + L+ T + A L ++D T ++EN + +D + L+ E N
Sbjct: 385 NKLENQLEATVEEIKAELGSVQDKMNTKLGQMENKTQHQMRVLDKLMVERLSAERTECLN 444
Query: 590 VVNIAQNNVHYHHGERTNIKREFDIKTWCTELEQGYKNLELWNLWISNACEA 435
+ ++ H GE+ I ++KTWC Q NLE S AC A
Sbjct: 445 RLQ-QHSDTEKHEGEKRQISLVDELKTWCMLKIQ---NLEQKLSGDSRACRA 492
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,054,079
Number of Sequences: 237096
Number of extensions: 1735966
Number of successful extensions: 3657
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3656
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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