Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15f16
         (807 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2762|AAF48879.2|  598|Drosophila melanogaster CG32540-P...    31   2.5  
BT029055-1|ABJ16988.1|   92|Drosophila melanogaster IP06635p pro...    29   7.5  

>AE014298-2762|AAF48879.2|  598|Drosophila melanogaster CG32540-PA
           protein.
          Length = 598

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 756 ASQSFISLKEIQRCPSPTSSILSSKRSYQPIPYSHY 649
           A Q  ++     RC +     +S  RS  PIPYSH+
Sbjct: 385 AGQDLLAQHSRPRCGTSQVGFVSDNRSANPIPYSHF 420


>BT029055-1|ABJ16988.1|   92|Drosophila melanogaster IP06635p
           protein.
          Length = 92

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 149 RNNRKQVIRKKIKLKRQINRRKKSNLKIKQK 57
           RNN+K+  +KK K K++  ++KK   K K+K
Sbjct: 57  RNNKKKKKKKKKKKKKKKKKKKKKKKKKKKK 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,755,504
Number of Sequences: 53049
Number of extensions: 607000
Number of successful extensions: 1848
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1816
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)