Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15f12
(820 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 221 5e-58
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 122 5e-28
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 110 1e-24
10_08_0620 - 19321612-19323237 109 3e-24
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 108 6e-24
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 107 1e-23
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 103 2e-22
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 100 1e-21
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 100 2e-21
11_06_0178 + 20942757-20942801,20943790-20943867,20943930-209440... 97 1e-20
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 95 5e-20
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 80 2e-15
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 46 4e-05
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 35 0.089
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 32 0.63
04_04_1141 + 31180906-31181249,31181719-31181862,31181971-311820... 29 3.4
01_05_0793 + 25278846-25279504,25279598-25279702,25280949-252810... 29 3.4
09_04_0669 + 19335661-19335917,19336153-19336279,19336393-193367... 28 7.8
04_03_0913 + 20777859-20780309 28 7.8
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 221 bits (540), Expect = 5e-58
Identities = 105/223 (47%), Positives = 147/223 (65%)
Frame = -2
Query: 819 RRLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGST 640
RR +T + L +L+ P ELGY D+V V+E+G RV V K E + ++T+V+RGST
Sbjct: 320 RRFCRTTGSIALLKLSRPNADELGYADSVSVEEIGGARVTVVKNEEGGNSVATVVLRGST 379
Query: 639 DNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKF 460
D+ +DD+ERA+DDGVNT+K + RD R +PGA ATEIELA++L EF+ GL+QYA+ KF
Sbjct: 380 DSILDDLERAVDDGVNTYKSMCRDSRIIPGAAATEIELARRLKEFSLKETGLDQYAIAKF 439
Query: 459 AVALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSY 280
A + E +P LA+N+G +A E+++ +Y H G G ID E G D I D Y
Sbjct: 440 AESFEMVPRTLAENAGLSAMEIISSLYAEHAGGNTKVG--IDLEEGGCKDVSIMKIWDLY 497
Query: 279 LLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPRAPAGSDDE 151
+ K + +KY+ AA T+L+VDQIIMAK AGGP+ A G D++
Sbjct: 498 VTKLFALKYSADAACTVLRVDQIIMAKPAGGPRRDAQPGMDED 540
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 122 bits (293), Expect = 5e-28
Identities = 67/220 (30%), Positives = 116/220 (52%)
Frame = -2
Query: 819 RRLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGST 640
+R+A TV + + LG C+ +VG+ R +F S + +TIV+RG
Sbjct: 323 QRVAAATGGTVQTSVNNVIDEVLGTCEVFEERQVGNERFNIFSGCPS-GQTATIVLRGGA 381
Query: 639 DNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKF 460
D ++++ ER++ D + + ++ VPG GA ++E+++ L + A T+ G Q+ V F
Sbjct: 382 DQFIEEAERSLHDAIMIVRRALKNSTVVPGGGAIDMEISKYLRQHARTIAGKSQFFVNSF 441
Query: 459 AVALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSY 280
A ALE IP L DN+G +AT+V+NK+ + H G+ A F +D G+ D+ + +
Sbjct: 442 AKALEVIPRQLCDNAGFDATDVLNKLRQKHASGE-GANFGVDINTGGIADSFANFVWEPA 500
Query: 279 LLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPRAPAGS 160
++K I A AA IL VD+ + ++ + A A +
Sbjct: 501 VVKINAINAATEAACLILSVDETVKNPKSESAQGDAAASA 540
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 110 bits (264), Expect = 1e-24
Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Frame = -2
Query: 813 LAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDN 634
+ KT+N + + +LGY D V VG++++V R +T+++RGS
Sbjct: 332 ITKTLNCLPIANIEHFREDKLGYADLVEEVSVGESKIVKIMGIKDMGRTATVLVRGSNQL 391
Query: 633 YMDDIERAIDDG----------------VNTFKGIARDGRFVPGAGATEIELAQQLLEFA 502
+D+ ER++ D VN + + + G GA EIE++ QL +A
Sbjct: 392 VIDEAERSLHDALCVIRLVSGLINELQRVNWLRCLVNKRFLIAGGGAPEIEMSMQLAAWA 451
Query: 501 DTLPGLEQYAVRKFAVALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENN 322
L G+E Y +++FA ALE IP+ LA+N+G N +V ++ H +G+KNAG ++
Sbjct: 452 KELQGMESYCIKEFAEALEVIPYTLAENAGLNPISIVTELRNRHAKGEKNAGINV--RKG 509
Query: 321 GVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAK 199
+ + E+ ++ L+ I A ILK+D I+ +
Sbjct: 510 QITNILEENVVQPLLVSTSAITLACECVRMILKIDDIVTVR 550
>10_08_0620 - 19321612-19323237
Length = 541
Score = 109 bits (262), Expect = 3e-24
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 3/208 (1%)
Frame = -2
Query: 813 LAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGD---TRVVVFKMESSESRISTIVIRGS 643
+ KT+N + + +LG+ V VGD ++V + R +T+++RGS
Sbjct: 336 ITKTLNCMPIASIEHLREDKLGHAHLVEEISVGDGNNNKIVKITGIKNMGRTATVLVRGS 395
Query: 642 TDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRK 463
+D+ +R++ D + + + G GA EIE++ QL +A L G+E Y VR+
Sbjct: 396 NQMVIDEAQRSLHDAFCVIRCLVNKRFLIAGGGAPEIEMSMQLAAWAKELRGMESYCVRE 455
Query: 462 FAVALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDS 283
FA ALE IP+ LA+N+G + V ++ H +G+KNAG ++ + + E+ ++
Sbjct: 456 FAEALEVIPYTLAENAGLDPISTVTELRNRHAKGEKNAGINV--RKGRITNILEENVVQP 513
Query: 282 YLLKFWGIKYAVGAATTILKVDQIIMAK 199
L+ + A ILK+D I+ +
Sbjct: 514 LLVSTSAVTLACECVRMILKIDDIVTVR 541
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 108 bits (259), Expect = 6e-24
Identities = 61/221 (27%), Positives = 117/221 (52%), Gaps = 5/221 (2%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGY-CDAVHVDEVGDTRVVVFKMESSESRISTIVIRGST 640
R+AK A ++ R ++G V ++GD F ++ + + T+++RG++
Sbjct: 324 RIAKACGAVIVNRPEELQESDVGTRAGLFEVKKIGD-EFFTFIVDCKDPKACTVLLRGAS 382
Query: 639 DNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKF 460
+ ++++ER + D ++ + I ++ + +PG GATE+ ++ L + + ++ G+E++
Sbjct: 383 KDVLNEVERNLQDAMSVARNILKNPKLLPGGGATELTVSAALKQKSSSVEGVEKWPYEAA 442
Query: 459 AVALESIPHALADNSGANATEVVNKIY---KAHKEGQKNAGFDIDSENNGVCDAKEKGII 289
A+A E+IP LA N G N ++ ++ H G+ NA ID + + D KE+ I
Sbjct: 443 ALAFEAIPRTLAQNCGLNVIRIMTQLQGKDMLHANGE-NAWVGIDGRSGDIVDMKERKIW 501
Query: 288 DSYLLKFWGIKYAVGAATTILKVDQIIMA-KRAGGPKPRAP 169
DSY +K K A+ AA +L++D I+ K+ P AP
Sbjct: 502 DSYSVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGASAP 542
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 107 bits (257), Expect = 1e-23
Identities = 61/220 (27%), Positives = 116/220 (52%), Gaps = 1/220 (0%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGY-CDAVHVDEVGDTRVVVFKMESSESRISTIVIRGST 640
R+AK A ++ R ++G V + GD F ++ + + T+++RG++
Sbjct: 324 RIAKACGAVIVNRPEELQESDVGTGAGLFEVKKFGD-EFFAFIVDCKDPKACTVLLRGAS 382
Query: 639 DNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKF 460
+ ++++ER + D ++ + I ++ + +PG GATE+ ++ L + + ++ G+E++
Sbjct: 383 KDVLNEVERNLQDAMSMARNIWKNPKLLPGGGATELTVSATLKQKSSSVEGVEKWPYEAA 442
Query: 459 AVALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSY 280
A+A E+IP L N G N + ++ H G+ NA ID + + D KE+ I DSY
Sbjct: 443 ALAFEAIPRTLLQNCGLNVIRTMTQLQGKHANGE-NAWVGIDGSSGDIVDMKERKIWDSY 501
Query: 279 LLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPRAPAGS 160
+K K A+ AA +L++D I+ +G K +AP S
Sbjct: 502 SVKAQTFKTAIEAACMLLRIDDIV----SGIKKKQAPGAS 537
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 103 bits (247), Expect = 2e-22
Identities = 56/203 (27%), Positives = 114/203 (56%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTD 637
RLA + P + +LG+C+ + +G+ +++ F + + TIV+RG+++
Sbjct: 315 RLALVTGGDIASTFDNPESVKLGHCNVIEEIMIGEDKLIHFSGVAM-GQACTIVLRGASE 373
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
+ +D+ ER++ D + D R + G G E+ +A+ + + A PG + +A+ F+
Sbjct: 374 HVLDEAERSLHDALCVLSQTVNDTRVLFGGGWPEMVMAKAVDDLARKTPGKKSHAIDAFS 433
Query: 456 VALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 277
AL++IP +ADN+G ++ E+++++ H + AG D+ + + G D +++GI +++
Sbjct: 434 RALQAIPTIIADNAGLDSAELISQLRAEHHKENCTAGIDVITGSVG--DMQKRGISEAFK 491
Query: 276 LKFWGIKYAVGAATTILKVDQII 208
+K + A AA IL+VD+II
Sbjct: 492 VKQAILLSATEAAEMILRVDEII 514
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 100 bits (240), Expect = 1e-21
Identities = 60/213 (28%), Positives = 113/213 (53%), Gaps = 10/213 (4%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFK-MESSESRISTIVIRGST 640
RLA + P + +LG+C + +G+ R++ F +E ++ TIV+RG++
Sbjct: 292 RLALVTGGDIASTFDNPESVKLGHCKVIEEIMIGEDRLIHFSGVEMGQA--CTIVLRGAS 349
Query: 639 DNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKF 460
++ +D+ ER++ D + D R + G G E+ +A+++ A PG + +A+ F
Sbjct: 350 EHVLDEAERSLHDALCVLSQTVNDTRVLYGGGWPEMVMAKEVDGLARKTPGKKSHAIEAF 409
Query: 459 AVALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENN---------GVCDA 307
+ AL+SIP +ADN+G ++ ++++++ H + Q AG D+ S V D
Sbjct: 410 SRALQSIPTIIADNAGLDSADLISQLRAEHHKEQSTAGIDVISGGGLELILRLLPQVGDM 469
Query: 306 KEKGIIDSYLLKFWGIKYAVGAATTILKVDQII 208
++ GI +S+ K + A AA IL+VD+I+
Sbjct: 470 EKLGISESFKAKQAVLMSATEAAEMILRVDEIV 502
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 100 bits (239), Expect = 2e-21
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
Frame = -2
Query: 813 LAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMES-SESRISTIVIRGSTD 637
+A ++PR + ++LG V G T+ + +E + SR TI IRG
Sbjct: 329 IAIATGGRIVPRFQELSPEKLGKAGIVREKSFGTTKDRMLYIEQCANSRAVTIFIRGGNK 388
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
+++ +R++ D + + + R+ V G G+ EI + + AD PG+EQYA+R FA
Sbjct: 389 MMIEETKRSLHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADRYPGVEQYAIRSFA 448
Query: 456 VALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 277
AL++IP ALA+NSG + + + + K+ + + N ID + G KE+ + ++ +
Sbjct: 449 DALDAIPLALAENSGLSPIDTLTAV-KSQQVKESNPHCGIDCNDVGTNHMKEQNVFETLI 507
Query: 276 LKFWGIKYAVGAATTILKVDQII 208
K I A ILK+D +I
Sbjct: 508 GKQQQILLATQVVKMILKIDDVI 530
>11_06_0178 +
20942757-20942801,20943790-20943867,20943930-20944025,
20944114-20944221,20944322-20944420
Length = 141
Score = 97.5 bits (232), Expect = 1e-20
Identities = 44/93 (47%), Positives = 65/93 (69%)
Frame = -2
Query: 780 RLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDD 601
+L+ P ELGY D+V ++++G R E + ++ V+RGSTD+ +DD+ RA+DD
Sbjct: 49 KLSQPNADELGYADSVSLEDIGGVR-----NEEGRNSVAIAVLRGSTDSILDDLGRAVDD 103
Query: 600 GVNTFKGIARDGRFVPGAGATEIELAQQLLEFA 502
GVNT+K + RD R +PGA ATEIELA++L EF+
Sbjct: 104 GVNTYKSMCRDSRIIPGAAATEIELAKRLKEFS 136
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 95.5 bits (227), Expect = 5e-20
Identities = 68/224 (30%), Positives = 109/224 (48%), Gaps = 13/224 (5%)
Frame = -2
Query: 819 RRLAKTVNATVLPRLTTPTTQE------LGYCDAVHVDEVGDTRVVVFKMESSESRISTI 658
R +AK AT++ +E LG+ D V + + D V++ K + S +S I
Sbjct: 302 RHVAKATGATMVSTFADMEGEETFDSSFLGHADEVVEERIADDDVILVKGTKNTSAVS-I 360
Query: 657 VIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQ 478
++RG+ D +D+I+R++ D + K V G GA E L+ L A TL EQ
Sbjct: 361 ILRGANDFMLDEIDRSLHDALCIVKRTLESNMVVAGGGAVEAALSVYLENLATTLGSREQ 420
Query: 477 YAVRKFAVALESIPHALADNSGANATEVVNKIYKAHKEGQKNA------GFDIDSENNGV 316
A+ +FA +L IP L+ N+ +ATE+V K+ H Q A +D +
Sbjct: 421 LAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHTAQTKADKQHFSSMGLDLSKGII 480
Query: 315 CDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQII-MAKRAGG 187
+ E G+I+ + K I++A AA TIL++D +I + K G
Sbjct: 481 RNNLEYGVIEPAMSKVKIIQFATEAAITILRIDDMIKLTKEESG 524
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 80.2 bits (189), Expect = 2e-15
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Frame = -2
Query: 753 LGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIA 574
LG+ V+ +G+ + F R TI+I+G D+ + I+ A+ DG+ + K
Sbjct: 363 LGWAGLVYEHTLGEEKYT-FIENVKNPRSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTV 421
Query: 573 RDGRFVPGAGATEIELAQQLLE-FADTLPGLEQYAVRKFAVALESIPHALADNSGANATE 397
D V GAGA E+ + L++ T+ G Q V FA AL IP LA+NSG + +
Sbjct: 422 EDEAVVLGAGAFEVAAKKHLIDNVKKTVKGRAQLGVEAFADALLVIPKTLAENSGLDTQD 481
Query: 396 VVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVD 217
V+ + H G ++ + D + +GI D+Y +K I A+ +L VD
Sbjct: 482 VIVSLQNEHDRG---LVVGLNHHSGEPIDPQMEGIFDNYSVKRQIINSGPIIASQLLLVD 538
Query: 216 QIIMAKR 196
++I A R
Sbjct: 539 EVIRAGR 545
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 46.0 bits (104), Expect = 4e-05
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 1/165 (0%)
Frame = -2
Query: 669 ISTIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLP 490
++ I + T+ + + + ++D +N K +G V G G T + LA ++ D L
Sbjct: 431 VAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLAARVDAIKDNLE 489
Query: 489 GLEQYAVRKFAVALESIPHAL-ADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVC 313
EQ + S P L A N+G N + V K+ N F ++
Sbjct: 490 NDEQKVGAEIVRRALSYPLKLIAKNAGVNGSVVTEKVLS-----NDNFKFGYNAATGQYE 544
Query: 312 DAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKP 178
D GIID + +++A A T L D +++ + P P
Sbjct: 545 DLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAP 589
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 34.7 bits (76), Expect = 0.089
Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGYCDAVHVDE-------VGD-----TRVVVFKMESSES 673
R+++ A ++P + ++Q+LG+CD HV++ G+ + ++F +
Sbjct: 572 RISRCTGAHIVPSIDYVSSQKLGHCDLFHVEKYVEEHGTAGEGGKKMLKTLMFFEGCPKP 631
Query: 672 RISTIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTL 493
TI+++G+ + + ++ + GV +A + F+ GAT EL + L
Sbjct: 632 LGCTILLKGANGDELKKVKHVVQYGVFAAYHLALETSFLVDEGATLPELPLK-SPIIVAL 690
Query: 492 PGLEQYAVRKFA-VALESIPHALADNSGANATEV 394
P A R + + + +P A + N A +V
Sbjct: 691 PDKPSSADRSISTIPILQMPTASSPNDSLQAFDV 724
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 31.9 bits (69), Expect = 0.63
Identities = 22/109 (20%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGD------------TRVVVFKMESSES 673
R+A+ NA ++P + +Q+LG+C+ +VD+ + + ++F +
Sbjct: 552 RIARCTNAHIVPSIDLLPSQKLGHCELFYVDKYVEHSVNSNNTAKKMPKTMMFFEGCPKP 611
Query: 672 RISTIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIEL 526
T++++G + + + I+ + G+ +A + F+ GAT E+
Sbjct: 612 LGCTVLLKGGSMDELKKIKHVVQYGIFAAYHLALETSFLADEGATLPEI 660
>04_04_1141 +
31180906-31181249,31181719-31181862,31181971-31182054,
31182196-31182236,31182726-31182803,31183050-31183139,
31183236-31183325,31183808-31183962,31184737-31184796
Length = 361
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -2
Query: 336 DSENNGVCDAKEKGIIDSYLLK 271
DSEN+G A +KG++DS +L+
Sbjct: 248 DSENSGTASATKKGVLDSIVLQ 269
>01_05_0793 +
25278846-25279504,25279598-25279702,25280949-25281071,
25281167-25281337,25281440-25281569,25281797-25282039,
25282084-25282202,25282269-25282331,25282423-25282486
Length = 558
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -2
Query: 414 GANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFW 265
G+N+TE NK+ + + G+D+ G +E +I Y+L W
Sbjct: 497 GSNSTEFANKVERTGSSTSDSLGYDVIDHQCGYRSDRE--MIGRYMLVLW 544
>09_04_0669 +
19335661-19335917,19336153-19336279,19336393-19336771,
19336857-19336915,19337413-19337449,19337629-19337996,
19338493-19338543
Length = 425
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 160 TSSWRSWFWSACSLCHNDLINLKNGCCCSNSILY 261
+S+ RS W C C DL++L + CSN+I +
Sbjct: 61 SSAARSRLW--CPFCSADLVDLDSRFACSNAIYH 92
>04_03_0913 + 20777859-20780309
Length = 816
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 175 SWFWSACSLCHNDLINLKNGCCCSNS 252
S+ CS+ HN+L+N++ C NS
Sbjct: 395 SFINGGCSIWHNELLNIRKDQCSENS 420
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,793,961
Number of Sequences: 37544
Number of extensions: 420981
Number of successful extensions: 1238
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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