Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15f12
(820 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 227 6e-60
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 113 1e-25
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 113 1e-25
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 113 1e-25
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 113 1e-25
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 110 1e-24
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 110 1e-24
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 110 1e-24
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 110 1e-24
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 110 1e-24
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 103 2e-22
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 103 2e-22
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 99 4e-21
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 85 4e-17
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 73 2e-13
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 54 9e-08
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 28 7.0
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 28 7.0
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 28 7.0
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81058-6|CAB62801.2| 252|Caenorhabditis elegans Hypothetical pr... 28 9.2
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 227 bits (556), Expect = 6e-60
Identities = 112/224 (50%), Positives = 150/224 (66%), Gaps = 1/224 (0%)
Frame = -2
Query: 819 RRLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGST 640
RRL +TV A R+ P LG+CD+V V E+GD VVVF +S +++TI+IRGS+
Sbjct: 355 RRLCRTVGAQPQARICAPAVNLLGHCDSVAVQEIGDENVVVFDKKSETGKVATIIIRGSS 414
Query: 639 DNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKF 460
+ +DD+ERA+DD VNT+K + +DG+ + GAGA EIELA+++ F PGLEQYA++KF
Sbjct: 415 QSRIDDVERAVDDAVNTYKALTKDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKF 474
Query: 459 AVALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSY 280
A ALE++P A+A+N+G TE + K+Y H G+KNAG DI DA I D Y
Sbjct: 475 AHALETLPKAIAENAGMPTTETLTKLYAEHVAGKKNAGIDIWKRE--TMDAVVNNIFDLY 532
Query: 279 LLKFWGIKYAVGAATTILKVDQIIMAKRA-GGPKPRAPAGSDDE 151
K IK A AA+TILKVDQIIM+K+A GGPKPR P D++
Sbjct: 533 AGKRLAIKLATDAASTILKVDQIIMSKQATGGPKPRGPKAQDED 576
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 113 bits (273), Expect = 1e-25
Identities = 64/205 (31%), Positives = 105/205 (51%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTD 637
RLA + ++ +P T + G CD + +G+ R++ F S +V+RG+T
Sbjct: 316 RLALVLGGEIVSTFDSPQTAQFGSCDLIEEIMIGEDRLLRFSGVKLGEACS-VVLRGATQ 374
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
+D+ ER++ D + ++ + V GAGA+EI ++ + A + G E AV F
Sbjct: 375 QILDESERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKESLAVEAFG 434
Query: 456 VALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 277
AL +P + DN+G ++ E+V ++ H G+ N G DI E V D + G+I+SY
Sbjct: 435 RALAQLPTIICDNAGLDSAELVTRLRAEHANGRHNMGIDI--EKGEVADVTKLGVIESYN 492
Query: 276 LKFWGIKYAVGAATTILKVDQIIMA 202
+K + A A IL+VD II A
Sbjct: 493 VKLCMVSSAAEATEQILRVDDIIKA 517
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 113 bits (272), Expect = 1e-25
Identities = 64/205 (31%), Positives = 105/205 (51%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTD 637
RLA + ++ +P T + G CD + +G+ R++ F S +V+RG+T
Sbjct: 316 RLALVLGGEIVSTFDSPQTAQFGSCDLIEEIMIGEDRLLRFSGVKLGEACS-VVLRGATQ 374
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
+D+ ER++ D + ++ + V GAGA+EI ++ + A + G E AV F
Sbjct: 375 QILDESERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFG 434
Query: 456 VALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 277
AL +P + DN+G ++ E+V ++ H G+ N G DI E V D + G+I+SY
Sbjct: 435 RALAQLPTIICDNAGLDSAELVTRLRAEHANGRHNMGIDI--EKGEVADVTKLGVIESYN 492
Query: 276 LKFWGIKYAVGAATTILKVDQIIMA 202
+K + A A IL+VD II A
Sbjct: 493 VKLCMVSSAAEATEQILRVDDIIKA 517
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 113 bits (272), Expect = 1e-25
Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 14/236 (5%)
Frame = -2
Query: 819 RRLAKTVNATVLPRLTTPTTQE------LGYCDAVHVDEVGDTRVVVFKMESSESRISTI 658
+R+AK AT+ L T E LG+ D + + + D +++ K S + S+I
Sbjct: 320 KRIAKATGATLTVSLATLEGDEAFDASLLGHADEIVQERISDDELILIKGPKSRTA-SSI 378
Query: 657 VIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQ 478
++RG+ D +D++ER++ D + + + + V G GA E L+ L +A TL EQ
Sbjct: 379 ILRGANDVMLDEMERSVHDSLCVVRRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQ 438
Query: 477 YAVRKFAVALESIPHALADNSGANATEVVNKIYKAHKEGQ--------KNAGFDIDSENN 322
AV +FA AL IP LA N+ ++T++V K+ H + Q K AG D+ E
Sbjct: 439 LAVAEFASALLIIPKVLASNAARDSTDLVTKLRAYHSKAQLIPQLQHLKWAGLDL--EEG 496
Query: 321 GVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPRAPAGSDD 154
+ D KE GI++ L K +K+A AA TIL++D +I + + P G DD
Sbjct: 497 TIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIKLDK------QEPLGGDD 546
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 113 bits (272), Expect = 1e-25
Identities = 64/205 (31%), Positives = 105/205 (51%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTD 637
RLA + ++ +P T + G CD + +G+ R++ F S +V+RG+T
Sbjct: 316 RLALVLGGEIVSTFDSPQTAQFGSCDLIEEIMIGEDRLLRFSGVKLGEACS-VVLRGATQ 374
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
+D+ ER++ D + ++ + V GAGA+EI ++ + A + G E AV F
Sbjct: 375 QILDESERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFG 434
Query: 456 VALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 277
AL +P + DN+G ++ E+V ++ H G+ N G DI E V D + G+I+SY
Sbjct: 435 RALAQLPTIICDNAGLDSAELVTRLRAEHANGRHNMGIDI--EKGEVADVTKLGVIESYN 492
Query: 276 LKFWGIKYAVGAATTILKVDQIIMA 202
+K + A A IL+VD II A
Sbjct: 493 VKLCMVSSAAEATEQILRVDDIIKA 517
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 110 bits (264), Expect = 1e-24
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 1/202 (0%)
Frame = -2
Query: 813 LAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESS-ESRISTIVIRGSTD 637
LA NA ++PR + + ++LG V G + + +E ++ TI +RG
Sbjct: 332 LAIATNARIVPRFSELSKEKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNK 391
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
+D+ +RA+ D + + + RD R V G G+ E+ A Q+ + AD + G+EQYA R FA
Sbjct: 392 MIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFA 451
Query: 456 VALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 277
ALESIP ALA+NSG + ++ + KA + + ID+ G D KE+ +I++ L
Sbjct: 452 DALESIPMALAENSGLAPIDALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLL 510
Query: 276 LKFWGIKYAVGAATTILKVDQI 211
K I A ILK+D +
Sbjct: 511 SKREQISLATQVVRMILKIDDV 532
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 110 bits (264), Expect = 1e-24
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 1/202 (0%)
Frame = -2
Query: 813 LAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESS-ESRISTIVIRGSTD 637
LA NA ++PR + + ++LG V G + + +E ++ TI +RG
Sbjct: 332 LAIATNARIVPRFSELSKEKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNK 391
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
+D+ +RA+ D + + + RD R V G G+ E+ A Q+ + AD + G+EQYA R FA
Sbjct: 392 MIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFA 451
Query: 456 VALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 277
ALESIP ALA+NSG + ++ + KA + + ID+ G D KE+ +I++ L
Sbjct: 452 DALESIPMALAENSGLAPIDALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLL 510
Query: 276 LKFWGIKYAVGAATTILKVDQI 211
K I A ILK+D +
Sbjct: 511 SKREQISLATQVVRMILKIDDV 532
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 110 bits (264), Expect = 1e-24
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 1/202 (0%)
Frame = -2
Query: 813 LAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESS-ESRISTIVIRGSTD 637
LA NA ++PR + + ++LG V G + + +E ++ TI +RG
Sbjct: 126 LAIATNARIVPRFSELSKEKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNK 185
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
+D+ +RA+ D + + + RD R V G G+ E+ A Q+ + AD + G+EQYA R FA
Sbjct: 186 MIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFA 245
Query: 456 VALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 277
ALESIP ALA+NSG + ++ + KA + + ID+ G D KE+ +I++ L
Sbjct: 246 DALESIPMALAENSGLAPIDALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLL 304
Query: 276 LKFWGIKYAVGAATTILKVDQI 211
K I A ILK+D +
Sbjct: 305 SKREQISLATQVVRMILKIDDV 326
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 110 bits (264), Expect = 1e-24
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 1/202 (0%)
Frame = -2
Query: 813 LAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESS-ESRISTIVIRGSTD 637
LA NA ++PR + + ++LG V G + + +E ++ TI +RG
Sbjct: 332 LAIATNARIVPRFSELSKEKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNK 391
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
+D+ +RA+ D + + + RD R V G G+ E+ A Q+ + AD + G+EQYA R FA
Sbjct: 392 MIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFA 451
Query: 456 VALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 277
ALESIP ALA+NSG + ++ + KA + + ID+ G D KE+ +I++ L
Sbjct: 452 DALESIPMALAENSGLAPIDALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLL 510
Query: 276 LKFWGIKYAVGAATTILKVDQI 211
K I A ILK+D +
Sbjct: 511 SKREQISLATQVVRMILKIDDV 532
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 110 bits (264), Expect = 1e-24
Identities = 75/236 (31%), Positives = 120/236 (50%), Gaps = 14/236 (5%)
Frame = -2
Query: 819 RRLAKTVNATVLPRLTTPTTQE------LGYCDAVHVDEVGDTRVVVFKMESSESRISTI 658
+R+AK AT+ L T E LG+ D + + + D +++ K S + S+I
Sbjct: 320 KRIAKATGATLTVSLATLEGDEAFDASLLGHADEIVQERISDDELILIKGPKSRTA-SSI 378
Query: 657 VIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQ 478
++RG+ D +D++ER++ D + + + + V G GA E L+ L +A TL EQ
Sbjct: 379 ILRGANDVMLDEMERSVHDSLCVVRRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQ 438
Query: 477 YAVRKFAVALESIPHALADNSGANATEVVNKIYKAHKEGQ--------KNAGFDIDSENN 322
AV +FA AL IP LA N+ ++T++V + H + Q K AG D+ E
Sbjct: 439 LAVAEFASALLIIPKVLASNAARDSTDLVTFLRAYHSKAQLIPQLQHLKWAGLDL--EEG 496
Query: 321 GVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPRAPAGSDD 154
+ D KE GI++ L K +K+A AA TIL++D +I + + P G DD
Sbjct: 497 TIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIKLDK------QEPLGGDD 546
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 103 bits (246), Expect = 2e-22
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Frame = -2
Query: 753 LGYCDAVH-VDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 577
LGY D V + GD +V+ + +I++RGS +++ +R+I D + + +
Sbjct: 356 LGYADLVEEIPTGGDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIRCL 415
Query: 576 ARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPHALADNSGANATE 397
+ +PG GA E+E+A +L A T G QY R FA ALE IP+ LA+N+G +
Sbjct: 416 VKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIH 475
Query: 396 VVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVD 217
V ++ H G N+ + ++ V D E+ ++ L+ IK A +ILK+D
Sbjct: 476 TVTELRNNHANG--NSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKID 533
Query: 216 QIIMAKR 196
I+MA R
Sbjct: 534 DIVMAVR 540
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 103 bits (246), Expect = 2e-22
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Frame = -2
Query: 753 LGYCDAVH-VDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 577
LGY D V + GD +V+ + +I++RGS +++ +R+I D + + +
Sbjct: 356 LGYADLVEEIPTGGDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIRCL 415
Query: 576 ARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPHALADNSGANATE 397
+ +PG GA E+E+A +L A T G QY R FA ALE IP+ LA+N+G +
Sbjct: 416 VKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIH 475
Query: 396 VVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVD 217
V ++ H G N+ + ++ V D E+ ++ L+ IK A +ILK+D
Sbjct: 476 TVTELRNNHANG--NSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKID 533
Query: 216 QIIMAKR 196
I+MA R
Sbjct: 534 DIVMAVR 540
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 98.7 bits (235), Expect = 4e-21
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTD 637
RL +VL ++ LG C + +VG R F+ + S+++ T+++RG +
Sbjct: 319 RLMSACGGSVLTTVSQIDDSVLGKCGKFYEQQVGSERYNFFE-DCSKAQACTLLLRGGAE 377
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
++ + ER++ D + + ++ V G GA E+EL++ + E + + G +Q +
Sbjct: 378 QFIAETERSLHDAIMIVRRAKKNDSIVAGGGAIEMELSRLIREHSKGIEGKDQAFWMAYG 437
Query: 456 VALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 277
A E IP L N+G +A +V+NK+ H +G+K AG DI E V D + + +
Sbjct: 438 QAFEIIPRQLCQNAGLDALDVLNKLRHRHAQGEKWAGIDIHRE--AVGDNLVACVWEPSI 495
Query: 276 LKFWGIKYAVGAATTILKVDQIIMAKR--AGGPKPRAP 169
+K I A AA +L +DQ + R +GG P P
Sbjct: 496 VKRNAITAATEAACLVLSIDQTVKNVRTPSGGAMPGLP 533
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 85.4 bits (202), Expect = 4e-17
Identities = 49/215 (22%), Positives = 106/215 (49%), Gaps = 3/215 (1%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGY-CDAVHVDEVGDTRVVVFKMESSESRISTIVIRGST 640
RLA+ A V+ + +++G V ++ D E++ + T+V+RG +
Sbjct: 325 RLARVCGARVVHDTSDLRDEDVGTKAQLFEVVKIADEYYTYVTAETTTA--CTVVLRGPS 382
Query: 639 DNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKF 460
+ ++++ER + D ++ + I + + VPG GA E+ L++++ + + G++++ +
Sbjct: 383 KDVINEVERNLQDSLHVVRNIMINPKLVPGGGALEMALSREIEQQGAKMDGVKKWPYKAI 442
Query: 459 AVALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSY 280
+ALE IP L N G + + ++ H + +N F +D + + D + I D
Sbjct: 443 GLALEVIPRTLIQNCGGSTIRKMTELRAIHAQNAENWTFGVDGTSGDLVDMNKLEIWDPL 502
Query: 279 LLKFWGIKYAVGAATTILKVDQIIMA--KRAGGPK 181
++ +K A+ + +L++D I+ K GG K
Sbjct: 503 AVRIQVLKTAIETSVMLLRIDDIVSGTKKAVGGEK 537
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 72.9 bits (171), Expect = 2e-13
Identities = 56/214 (26%), Positives = 93/214 (43%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTD 637
RL V + + T ++LG+ V+ +G+ + F E + T++I+G
Sbjct: 327 RLQLAVGGEAVNSVDDLTPEDLGWAGLVYEHSLGEEKYT-FIEECRAPKSVTLLIKGPNK 385
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
+ + I+ AI DG+ D +PGA A EI L + + L G + FA
Sbjct: 386 HTITQIKDAIHDGLRAVFNTIVDKAVLPGAAAFEIAAYVMLKKDVENLKGRAKLGAEAFA 445
Query: 456 VALESIPHALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 277
AL IP LA N G +A E + K+ + + +D E G + +GI D+
Sbjct: 446 QALLVIPKTLAVNGGYDAQETLVKLIEEKTAAGPDIAVGLDLETGGA--VEPQGIWDNVT 503
Query: 276 LKFWGIKYAVGAATTILKVDQIIMAKRAGGPKPR 175
+K I A A +L VD+++ A +P+
Sbjct: 504 VKKNSISSATVLACNLLLVDEVMRAGMTNLKQPQ 537
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 54.4 bits (125), Expect = 9e-08
Identities = 30/124 (24%), Positives = 61/124 (49%)
Frame = -2
Query: 816 RLAKTVNATVLPRLTTPTTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTD 637
RL +VL ++ LG C + +VG R F+ + S+++ T+++RG +
Sbjct: 319 RLMSACGGSVLTTVSQIDDSVLGKCGKFYEQQVGSERYNFFE-DCSKAQACTLLLRGGAE 377
Query: 636 NYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFA 457
++ + ER++ D + + ++ V G GA E+EL++ + E + + G +Q +
Sbjct: 378 QFIAETERSLHDAIMIVRRAKKNDSIVAGGGAIEMELSRLIREHSKGIEGKDQAFWMAYG 437
Query: 456 VALE 445
A E
Sbjct: 438 QAFE 441
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Frame = -2
Query: 597 VNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPHALADN 418
++ G+ D R PGA ++ + A +PG A + + +IP+A+++N
Sbjct: 134 IDELMGMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNN 193
Query: 417 ------SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 325
S A + + + K+ A G N+G D D E+
Sbjct: 194 FRQVVSSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 231
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Frame = -2
Query: 597 VNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPHALADN 418
++ G+ D R PGA ++ + A +PG A + + +IP+A+++N
Sbjct: 134 IDELMGMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNN 193
Query: 417 ------SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 325
S A + + + K+ A G N+G D D E+
Sbjct: 194 FRQVVSSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 231
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Frame = -2
Query: 597 VNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPHALADN 418
++ G+ D R PGA ++ + A +PG A + + +IP+A+++N
Sbjct: 100 IDELMGMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNN 159
Query: 417 ------SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 325
S A + + + K+ A G N+G D D E+
Sbjct: 160 FRQVVSSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 197
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Frame = -2
Query: 597 VNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPHALADN 418
++ G+ D R PGA ++ + A +PG A + + +IP+A+++N
Sbjct: 160 IDELMGMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNN 219
Query: 417 ------SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 325
S A + + + K+ A G N+G D D E+
Sbjct: 220 FRQVVSSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 257
>Z81058-6|CAB62801.2| 252|Caenorhabditis elegans Hypothetical
protein F11E6.6 protein.
Length = 252
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 233 VVAAPTAYFIPQNFKRYESIMPFSFASQTPLFSESI 340
+ A T YF K+Y I+PF + LF E +
Sbjct: 18 ISATATKYFFVSLLKKYPHILPFLASRDASLFGECV 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,197,890
Number of Sequences: 27780
Number of extensions: 390509
Number of successful extensions: 1283
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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