Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15f11
         (382 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86987-1|BAA34389.2|  790|Homo sapiens KIAA0214 protein protein.       28   8.7  
BC017061-1|AAH17061.1|  757|Homo sapiens mitofusin 2 protein.          28   8.7  
AY028429-1|AAK18728.1|  757|Homo sapiens mitochondrial assembly ...    28   8.7  
AL096840-9|CAI19088.2|  436|Homo sapiens mitofusin 2 protein.          28   8.7  
AL096840-8|CAI19087.2|  757|Homo sapiens mitofusin 2 protein.          28   8.7  
AK095018-1|BAC04475.1|  157|Homo sapiens protein ( Homo sapiens ...    28   8.7  
AF036536-1|AAD02058.2|  757|Homo sapiens CPRP1 protein.                28   8.7  

>D86987-1|BAA34389.2|  790|Homo sapiens KIAA0214 protein protein.
          Length = 790

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 292 LRKLSFLLTDFQMIVQKKPRKNKQVKNELQR 200
           +R+LS L+ D+QM     P   K  KNEL R
Sbjct: 471 IRRLSVLVDDYQMDFHPSPVVLKVYKNELHR 501


>BC017061-1|AAH17061.1|  757|Homo sapiens mitofusin 2 protein.
          Length = 757

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 292 LRKLSFLLTDFQMIVQKKPRKNKQVKNELQR 200
           +R+LS L+ D+QM     P   K  KNEL R
Sbjct: 438 IRRLSVLVDDYQMDFHPSPVVLKVYKNELHR 468


>AY028429-1|AAK18728.1|  757|Homo sapiens mitochondrial assembly
           regulatory factor protein.
          Length = 757

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 292 LRKLSFLLTDFQMIVQKKPRKNKQVKNELQR 200
           +R+LS L+ D+QM     P   K  KNEL R
Sbjct: 438 IRRLSVLVDDYQMDFHPSPVVLKVYKNELHR 468


>AL096840-9|CAI19088.2|  436|Homo sapiens mitofusin 2 protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 292 LRKLSFLLTDFQMIVQKKPRKNKQVKNELQR 200
           +R+LS L+ D+QM     P   K  KNEL R
Sbjct: 136 IRRLSVLVDDYQMDFHPSPVVLKVYKNELHR 166


>AL096840-8|CAI19087.2|  757|Homo sapiens mitofusin 2 protein.
          Length = 757

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 292 LRKLSFLLTDFQMIVQKKPRKNKQVKNELQR 200
           +R+LS L+ D+QM     P   K  KNEL R
Sbjct: 438 IRRLSVLVDDYQMDFHPSPVVLKVYKNELHR 468


>AK095018-1|BAC04475.1|  157|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37699 fis, clone BRHIP2016788, weakly similar to
           Mus musculus left-right dynein (Lrd) mRNA. ).
          Length = 157

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -1

Query: 175 FSVMPVSILTKGADEDADYEIYTGSKNENEEKDLPKRARSIA 50
           F   P   LT GA  +A   +    + ENEE+   +RARS A
Sbjct: 13  FREAPTLRLTSGAGLEAVGAVLLEEEEENEEEAAARRARSFA 54


>AF036536-1|AAD02058.2|  757|Homo sapiens CPRP1 protein.
          Length = 757

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 292 LRKLSFLLTDFQMIVQKKPRKNKQVKNELQR 200
           +R+LS L+ D+QM     P   K  KNEL R
Sbjct: 438 IRRLSVLVDDYQMDFHPSPVVLKVYKNELHR 468


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,990,491
Number of Sequences: 237096
Number of extensions: 551409
Number of successful extensions: 1128
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)