Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15f10
(832 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0864 - 32546696-32546803,32546881-32546961,32547134-325472... 122 3e-28
07_01_0454 + 3443871-3444024,3444268-3444356,3445482-3445557,344... 116 3e-26
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 61 9e-10
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 58 1e-08
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 58 1e-08
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 57 2e-08
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 53 2e-07
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 53 3e-07
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 52 6e-07
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 48 7e-06
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 48 9e-06
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 47 2e-05
07_01_0426 + 3239274-3239386,3239472-3239702,3242516-3242642,324... 46 4e-05
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 44 1e-04
10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,381... 43 3e-04
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 42 6e-04
11_06_0027 + 19363678-19363698,19364442-19364484,19366240-193662... 37 0.023
02_05_0382 + 28491318-28491374,28492031-28492114,28492249-284922... 37 0.023
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 36 0.030
09_04_0652 - 19227686-19227926,19229368-19232294 36 0.040
08_02_1343 - 26274788-26275019,26275972-26276611,26277174-262783... 36 0.040
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 36 0.052
04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632 35 0.069
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 29 3.4
09_05_0019 - 20103044-20103760 29 4.5
09_04_0075 - 14340458-14340551,14340643-14340814,14340895-143410... 29 4.5
08_02_1464 - 27317282-27318037 29 4.5
>01_06_0864 -
32546696-32546803,32546881-32546961,32547134-32547250,
32548264-32548338,32548618-32548680,32549122-32549187,
32549254-32549325,32549403-32549504,32549588-32549765,
32549871-32549926,32551578-32551688,32551797-32551865,
32551960-32552068,32552176-32552327,32552398-32552475,
32554257-32554379,32555527-32555646,32555729-32555809,
32555881-32556027,32556112-32556190,32557223-32557297,
32558004-32558113,32558984-32559082,32559700-32559815,
32559914-32560022,32560098-32560229,32560389-32560591,
32561428-32561585,32561668-32561797,32562529-32562607,
32562806-32562829
Length = 1073
Score = 122 bits (295), Expect = 3e-28
Identities = 71/172 (41%), Positives = 98/172 (56%), Gaps = 19/172 (11%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDP----YLQEVPS--TPSHYTLHAV 610
PPVL + L RF+YD RD VK NDR+EF +++LD YL + YTLH+V
Sbjct: 329 PPVLQVQLKRFEYDFVRDTMVKINDRYEFPLQLDLDKDDGKYLSPEADRRVRNLYTLHSV 388
Query: 609 LVHSGDNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPH------- 451
LVHSG HGGHY FI P W KFDD+ V++ + A+E YGG+E+ PH
Sbjct: 389 LVHSGGGHGGHYYAFIRPALSDIWYKFDDERVTKEDMKRALEEQYGGEEELPHTNPGLNT 448
Query: 450 ---MARKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRI---NEEMRYE 313
K ++AYML+YI+ + + ++ + E+DIP L R+ NEE Y+
Sbjct: 449 TPLRFTKHSNAYMLVYIRESDREKIICNLDENDIPEHLKIRLRKENEEREYK 500
>07_01_0454 +
3443871-3444024,3444268-3444356,3445482-3445557,
3445875-3445880,3445984-3446131,3446237-3446394,
3446473-3446676,3446803-3447038,3447227-3447439,
3447984-3448082,3448262-3448371,3448581-3448655,
3449407-3449485,3449563-3449709,3449785-3449865,
3449975-3450094,3450580-3450702,3451382-3451459,
3451586-3451674,3451760-3451868,3452117-3452227,
3452557-3452612,3452697-3452874,3452971-3453072,
3453160-3453231,3453350-3453415,3453502-3453567,
3453676-3453759,3454638-3454754,3455753-3455827,
3455912-3455995,3456138-3456179
Length = 1148
Score = 116 bits (278), Expect = 3e-26
Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 16/165 (9%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLD----PYLQEVP--STPSHYTLHAV 610
PPVL L L RF+YD RD VK NDR+EF +++LD YL + + YTLH+V
Sbjct: 440 PPVLQLQLKRFEYDFMRDTMVKINDRYEFPIQLDLDRDDGKYLSPDADRNVRNLYTLHSV 499
Query: 609 LVHSGDNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKED---------- 460
LVHSG HGGHY FI P +W KFDD+ V++ + A+E YGG+E+
Sbjct: 500 LVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDAKRALEEQYGGEEELPQTNPGLNN 559
Query: 459 APHMARKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINEE 325
P K ++AYML+YI+ + ++ + E DI L R+ ++
Sbjct: 560 TPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLEKD 604
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 61.3 bits (142), Expect = 9e-10
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGD 592
PPV++ L R+ + P+ K + F F ++++ L PS+ Y L A+L+H G
Sbjct: 316 PPVVNFQLKRYVFLPKTTTKKKISSAFSFPGQLDMGKRLSN-PSSSYTYGLSAILIHKGS 374
Query: 591 N-HGGHYVVFINPKGDGKWCKFDDDVVSR 508
+ GHYV + + +G+W +FDD+ VS+
Sbjct: 375 AANSGHYVAHVKDESNGQWWEFDDEHVSK 403
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 57.6 bits (133), Expect = 1e-08
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGD 592
PPVL L L RF+YD RD VK NDR+EF +++LD Y L D
Sbjct: 389 PPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLD-------RDDGKY-----LAPDAD 436
Query: 591 NHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKED----------APHMAR 442
+ K D D+ V TK +A+E YGG+E+ AP
Sbjct: 437 RSIRNLYALHRYKFD------DERVTKEDTK-KALEEQYGGEEELPQINPGFNNAPFKFT 489
Query: 441 KATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINEE 325
K ++AYML+YI+ + ++ + E DI L R+ +E
Sbjct: 490 KYSNAYMLVYIRESDKDKIMCNVDEKDIAEHLRVRLKKE 528
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 57.6 bits (133), Expect = 1e-08
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Frame = -2
Query: 774 SPPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSG 595
+P VL +HL RF+Y Q K + R + E+ L ++ Y+L AV+VH G
Sbjct: 295 APHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLGSMSED---ADCEYSLFAVVVHVG 351
Query: 594 D--NHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHMARKATSAYM 421
NH GHYV I K G W FDDD V + +++ ++ YG + H Y+
Sbjct: 352 SSPNH-GHYVSQI--KSHGNWLSFDDDTV-QISEESTLQTFYGSSRE--HCGGNTDHGYI 405
Query: 420 LIY 412
L Y
Sbjct: 406 LFY 408
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 56.8 bits (131), Expect = 2e-08
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGD 592
PPVL L L RF+YD RD VK NDR+EF +++LD Y L D
Sbjct: 375 PPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLD-------RDDGKY-----LAPDAD 422
Query: 591 NHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHM----------AR 442
+ K D D+ V TK +A+E YGG+E+ P +
Sbjct: 423 RSIRNLYTLHRYKFD------DERVTKEDTK-KALEEQYGGEEELPQINPGFNNTPFKFT 475
Query: 441 KATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINEE 325
K ++AYML+YI+ + ++ + E DI L R+ +E
Sbjct: 476 KYSNAYMLVYIRESDKDKIMCNVDEKDIAEHLRIRLKKE 514
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 53.2 bits (122), Expect = 2e-07
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVH--S 598
P +L +HL RF+Y Q K + R F E+ L + V ++ Y+L AVLVH S
Sbjct: 248 PNILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL---INTVDNSDLEYSLFAVLVHVGS 304
Query: 597 GDNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHMARKATSAYML 418
G NH GHY+ + K W FDD+ V T + ++ +G A + + Y+L
Sbjct: 305 GPNH-GHYISLV--KSHNHWLFFDDENV-EMTDESMVQTFFG---SAQEFSGNTDNGYIL 357
Query: 417 IY 412
Y
Sbjct: 358 FY 359
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = -2
Query: 774 SPPVLHLHLLRFQ-YDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHS 598
+P VL +HL RF ++P+ K + + +F +NL PY+ Y+L+ VLVH+
Sbjct: 317 APSVLTIHLKRFSPFNPRH----KIDKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHA 372
Query: 597 GDN-HGGHYVVFINPKGDGKWCKFDDD 520
G N GHY F+ G W DD+
Sbjct: 373 GWNTQSGHYYCFVR-TSSGIWHNLDDN 398
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 52.0 bits (119), Expect = 6e-07
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Frame = -2
Query: 774 SPPVLHLHLLRFQ-YDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHS 598
+P VL +HL RF ++P+ K + + +F ++L P++ + Y+L+ VLVH+
Sbjct: 230 APYVLTIHLKRFSPFNPRE----KIDKKVDFQPMLDLKPFISDSKGADFKYSLYGVLVHA 285
Query: 597 GDN-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAI 487
G N GHY F+ G W DD+ V + + + +
Sbjct: 286 GWNTQSGHYYCFVR-TSSGMWHNLDDNQVRQVREADVL 322
>12_02_1151 + 26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 48.4 bits (110), Expect = 7e-06
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEF-YEEINLDPYL-QEVPSTPSHYTLHAVLVHS 598
P +L +HL RF Y R K +F +++L Y+ +HY L+A+ H
Sbjct: 766 PEILIIHLKRFSYS--RYTKNKLETCVDFPVHDLDLSKYIGSRGQQISNHYRLYAISNHY 823
Query: 597 GDNHGGHYVVFINPKGDGKWCKFDD 523
G GGHY ++ +G W FDD
Sbjct: 824 GSMGGGHYTAYVYHEGKKGWYDFDD 848
>11_04_0281 + 15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 48.0 bits (109), Expect = 9e-06
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSH-YTLHAVLVHSG 595
P VL +HL RF + ++ F ++ +L Y+ S+ Y L+AV H G
Sbjct: 821 PEVLVIHLKRFSFSRSTKQKLETFVNFPIHD-FDLTNYIANKKSSERQIYELYAVSNHYG 879
Query: 594 DNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAI 487
GHY +I + +W FDD VS +++ I
Sbjct: 880 SMASGHYTAYIKLLDEERWYNFDDSHVSAINEEDGI 915
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = -2
Query: 774 SPPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVH-- 601
+P +L +HL RF+Y Q K + R F E+ L + Y+L AV+VH
Sbjct: 247 APHILVIHLKRFKYIEQLGRYKKLSYRVVFPMELK----LSTSDDVDTEYSLFAVVVHVG 302
Query: 600 SGDNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKED 460
SG NH GHYV + K W FDD+ V ++ ++ +G +
Sbjct: 303 SGPNH-GHYVSLV--KSHNHWLFFDDENV-EMVEESTLQTFFGSSHE 345
>07_01_0426 + 3239274-3239386,3239472-3239702,3242516-3242642,
3242729-3242788,3242868-3242960,3243073-3243369,
3243450-3243761,3243857-3244114,3244227-3244375,
3244470-3245102,3245367-3245640,3245736-3245777,
3246332-3246586,3246700-3246711
Length = 951
Score = 46.0 bits (104), Expect = 4e-05
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDP-QRDASVKFNDRFEFYEEINLDPYLQEVPS-TPSHYTLHAVLVHS 598
P VL +HL RF Y R+ F D F +++L Y+ + + HY L+A+ H
Sbjct: 779 PEVLVIHLKRFSYTQFTRNKLETFVD-FPI-SDLDLSSYIIDKSELSDCHYRLYAISNHY 836
Query: 597 GDNHGGHYVVFINPKGDGKWCKFDDD 520
G+ GGHY I + W KFDD+
Sbjct: 837 GNMGGGHYTASIYHEEGKGWYKFDDE 862
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 666 DPYLQ--EVPSTPSHYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQ 496
DPY + Y L AVL H G + GHYV ++ + DGKW +FDDD S ++
Sbjct: 363 DPYFNTFNLKHLTGIYDLIAVLTHKGRSADSGHYVGWVK-QDDGKWIEFDDDNPSIRKEE 421
Query: 495 EAIEYNYGG 469
E ++ + GG
Sbjct: 422 EILKLSGGG 430
>10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,
3812602-3812747,3812930-3813097,3813896-3814003,
3814859-3815029,3816557-3816949,3817522-3817617,
3817715-3817774,3818600-3818744,3819296-3819520,
3820106-3820254
Length = 890
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEF-YEEINLDPYLQEVPST-PSHYTLHAVLVHS 598
P +L +HL RF Y R K + F ++++ Y P Y L+AV+ H
Sbjct: 761 PEILVVHLKRFSYS--RFMKNKLDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHY 818
Query: 597 GDNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQE 493
G GGHY + + W FDD VS +++
Sbjct: 819 GGMGGGHYSAYAKLVEEDSWYHFDDSHVSSVGEED 853
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = -2
Query: 708 KFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVH---SGDNHGGHYVVFINPKGDGKW 538
K N F E +NL Y+ Y L+AV+VH GHYV ++ GKW
Sbjct: 610 KINKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDT-QGKW 668
Query: 537 CKFDDDVVSRCTKQEAI 487
K DD V + ++ +
Sbjct: 669 HKMDDSQVKPVSLEKVL 685
>11_06_0027 +
19363678-19363698,19364442-19364484,19366240-19366276,
19366359-19366602,19366749-19366765,19366901-19366986,
19367347-19367378,19367455-19367615,19367722-19367818,
19367894-19368085,19368172-19368233,19368302-19368448,
19368776-19369589
Length = 650
Score = 36.7 bits (81), Expect = 0.023
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -2
Query: 708 KFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDNHGGHYVVFI 562
K + F E+++ PY+ V + Y L ++VH G GGHY ++
Sbjct: 250 KIGELINFPTELDISPYMSGVVTDKHIYELFGIIVHEGGVIGGHYRSYV 298
>02_05_0382 +
28491318-28491374,28492031-28492114,28492249-28492272,
28492398-28492472,28493083-28493157,28493198-28493290,
28493332-28493409,28493690-28493767,28494084-28494147,
28494474-28494655,28494729-28495064,28495148-28495267,
28495434-28495923,28496240-28496502
Length = 672
Score = 36.7 bits (81), Expect = 0.023
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = -2
Query: 774 SPPVLHLHLLRFQYDPQRDASVKFNDRFEFYE-EINLDPYLQEVPSTPS-HYTLHAVLVH 601
SP V+ +HL RF D SV+ D+ Y E++L P+ + Y L+ V+ H
Sbjct: 339 SPDVVAIHLKRFT---SLDRSVEKIDKHVVYPLELDLKPFHCDPDINKELKYDLYGVVEH 395
Query: 600 SGDNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAI 487
SG GHYV + W +D V ++ A+
Sbjct: 396 SGSPSYGHYVCSVR-SSPSTWHLMNDSHVDLISEASAL 432
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 36.3 bits (80), Expect = 0.030
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = -2
Query: 765 VLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPS----HYTLHAVLVHS 598
++ LHL RF Y K F E+ L L PS+ Y L A + H
Sbjct: 574 IMILHLKRFSYGSH--GCTKLFKPIHFPLELVLSRDLLSSPSSEHMQSRRYELVATITHL 631
Query: 597 GDNHG-GHYVVFINPKGDGKWCKFDDDVVS 511
G N GHY G+W +FDDD V+
Sbjct: 632 GANPSRGHYTADAK-SASGQWLRFDDDNVT 660
>09_04_0652 - 19227686-19227926,19229368-19232294
Length = 1055
Score = 35.9 bits (79), Expect = 0.040
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -2
Query: 774 SPPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYL--QEVPSTPSHYTLHAVLVH 601
+PPVL ++L RF D K F E +++ P++ + + + Y L V+ H
Sbjct: 935 APPVLTINLNRFSQD-SHGRFKKLKGHVHFKETLDVRPFMDPRSKENDNTTYRLVGVVEH 993
Query: 600 SGDNHGGHYVVFI 562
G GHYV ++
Sbjct: 994 LGTMAAGHYVAYV 1006
>08_02_1343 -
26274788-26275019,26275972-26276611,26277174-26278367,
26278515-26278701
Length = 750
Score = 35.9 bits (79), Expect = 0.040
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQR-DASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSG 595
PPVL +HL+R+ D + V F + + + +DP ++ + S Y L + H G
Sbjct: 638 PPVLTIHLMRYLEDLTKVIGHVSFKEILDVGQ--FMDPSSEDRDN--SRYRLVGFVEHLG 693
Query: 594 DN-HGGHYVVFINP------KGDGKWCKFDDDVVSRCTKQEAIE 484
+ + GHYV ++ P G W + D ++ + +E ++
Sbjct: 694 PSMYAGHYVAYVRPSPPQQTNGSSSWFRASDTDITEVSLEEVLK 737
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 35.5 bits (78), Expect = 0.052
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQR-DASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSG 595
PPVL +HL+R P + V+F + + + +DP ++ + Y L V+ H G
Sbjct: 682 PPVLVIHLMRSLLGPHKVIGHVRFKEILDM--GLFMDPSSEDKDNL--SYRLVGVVEHRG 737
Query: 594 -DNHGGHYVVFI--NPK----GDGKWCKFDDDVVSRCTKQEAIE 484
N GH++ ++ +P+ G W + DD + + +E ++
Sbjct: 738 LGNDAGHFLAYVRASPRQETSGSSSWFRASDDSIREVSLEEVLK 781
>04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632
Length = 312
Score = 35.1 bits (77), Expect = 0.069
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = -2
Query: 633 SHYTLHAVLVHSGDNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAP 454
S + + AV++HSG GHYV ++ + + W K DD V+R +
Sbjct: 241 SEFEIFAVIMHSGKLEAGHYVTYL--RLNNHWYKCDDAWVTRVEE--------------- 283
Query: 453 HMARKATSAYMLIYIQTT 400
H R + AYML Y+Q T
Sbjct: 284 HTVR-TSQAYMLFYVQKT 300
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 663 PYLQEVPSTPSHYTLHAVLVHSGDNHGGHYVVFINPKGDGK 541
P+ +E P P H+T +A +S D HGG V G G+
Sbjct: 393 PWERETPRPPPHHTSNAACSNSND-HGGRSGVTEEEGGSGR 432
>09_05_0019 - 20103044-20103760
Length = 238
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 444 WPCEGRLPSRRSCIRWL 494
W CE R+P RR C WL
Sbjct: 63 WVCEVRVPGRRGCRLWL 79
>09_04_0075 -
14340458-14340551,14340643-14340814,14340895-14341066,
14341617-14341811,14341886-14342053,14342150-14342335,
14342797-14342881,14342896-14343206,14344222-14344569
Length = 576
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = -2
Query: 771 PPVLHLHLLRFQ----YDPQRDASVKFNDR-FEFYEEINLDPYLQEVPSTPSHYTLHAVL 607
P L LH+ RF + + V F + E + I L P ++ S Y L A +
Sbjct: 465 PKYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPL-PKPKDSEKLRSKYDLIANV 523
Query: 606 VHSGDNHGGHYVVFINPKGDGKWCKFDD 523
VH G G Y VF+ K + W + D
Sbjct: 524 VHDGKPGEGCYRVFVQRKSEEAWYEMQD 551
>08_02_1464 - 27317282-27318037
Length = 251
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 444 WPCEGRLPSRRSCIRWL 494
W CE R+P RR C WL
Sbjct: 67 WVCEVRVPGRRGCRLWL 83
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,641,933
Number of Sequences: 37544
Number of extensions: 473657
Number of successful extensions: 1205
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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