Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15f10
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 115 5e-26
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 115 5e-26
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 115 5e-26
Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 53 3e-07
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical p... 47 2e-05
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 47 2e-05
AF100663-4|AAC68982.2| 440|Caenorhabditis elegans Hypothetical ... 46 3e-05
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 45 8e-05
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 42 7e-04
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 42 7e-04
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 42 7e-04
AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical ... 39 0.004
AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical ... 39 0.004
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 36 0.036
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 36 0.036
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 33 0.19
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.77
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 31 1.0
U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical pr... 29 4.1
U53155-1|AAC48268.1| 393|Caenorhabditis elegans Oocyte maturati... 29 5.4
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 115 bits (276), Expect = 5e-26
Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 12/151 (7%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSH---YTLHAVLVH 601
PP+LH+ L+RFQY K N+RF F E++NL + P Y+LHAVLVH
Sbjct: 378 PPILHVQLMRFQYC---GVEQKINERFSFPEKMNLASCCELGPMLTEEDCVYSLHAVLVH 434
Query: 600 SGDNHGGHYVVFIN---------PKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHM 448
SG+ HGGHYV +IN P KWCKFDDDVVSR T +AI N+GG++
Sbjct: 435 SGEFHGGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSNFGGEK----- 489
Query: 447 ARKATSAYMLIYIQTTQLKYVLQDASESDIP 355
+SAYML+Y++ + L +S IP
Sbjct: 490 -TMNSSAYMLVYVRDNAIDQFLAPIPDSQIP 519
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 115 bits (276), Expect = 5e-26
Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 12/151 (7%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSH---YTLHAVLVH 601
PP+LH+ L+RFQY K N+RF F E++NL + P Y+LHAVLVH
Sbjct: 378 PPILHVQLMRFQYC---GVEQKINERFSFPEKMNLASCCELGPMLTEEDCVYSLHAVLVH 434
Query: 600 SGDNHGGHYVVFIN---------PKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHM 448
SG+ HGGHYV +IN P KWCKFDDDVVSR T +AI N+GG++
Sbjct: 435 SGEFHGGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSNFGGEK----- 489
Query: 447 ARKATSAYMLIYIQTTQLKYVLQDASESDIP 355
+SAYML+Y++ + L +S IP
Sbjct: 490 -TMNSSAYMLVYVRDNAIDQFLAPIPDSQIP 519
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 115 bits (276), Expect = 5e-26
Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 12/151 (7%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSH---YTLHAVLVH 601
PP+LH+ L+RFQY K N+RF F E++NL + P Y+LHAVLVH
Sbjct: 378 PPILHVQLMRFQYC---GVEQKINERFSFPEKMNLASCCELGPMLTEEDCVYSLHAVLVH 434
Query: 600 SGDNHGGHYVVFIN---------PKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHM 448
SG+ HGGHYV +IN P KWCKFDDDVVSR T +AI N+GG++
Sbjct: 435 SGEFHGGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSNFGGEK----- 489
Query: 447 ARKATSAYMLIYIQTTQLKYVLQDASESDIP 355
+SAYML+Y++ + L +S IP
Sbjct: 490 -TMNSSAYMLVYVRDNAIDQFLAPIPDSQIP 519
>Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical protein
K02C4.3 protein.
Length = 1307
Score = 53.6 bits (123), Expect = 2e-07
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Frame = -2
Query: 714 SVKFNDRFEFYEEINLDPYLQ---EVPSTPSH-YTLHAVLVHSGDNHGGHYVVFINPKG- 550
++K +R EE L + EVP H Y LHA++VHSG+ + GHY + K
Sbjct: 689 ALKTEERDCLAEEARLQEVIDQTYEVPELQQHKYELHAIIVHSGEANRGHYWTYKLKKSI 748
Query: 549 DG--KWCKFDDDVVSRCTKQEAIEYNYG-GKEDAPHMARKATSAYMLIYIQTTQLKYVLQ 379
DG +W K +D R + ++G G DAP SAYML+Y+++ V
Sbjct: 749 DGLEEWEKLNDQNADRVDWPKVESDSFGTGSRDAP-------SAYMLMYVRSDAEWLVSA 801
Query: 378 D---ASES--DIPPDLCDRI 334
D A E+ IPPDL +++
Sbjct: 802 DKLTALEAFETIPPDLQEKV 821
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLD--PYLQEV-PSTPSHYTLHAVLVH 601
PPV+ +HL RF + + N +E D PYL E+ P+ Y L+A +H
Sbjct: 251 PPVMIIHLKRFALF---NGDFEKNTAAVTFETARFDVRPYLHEMAPAEKPVYKLYAATLH 307
Query: 600 SGDNHGGHYVVFINPKGDGKWCKFDDDVVSRC 505
+G + GHY + KW +FDD VV+ C
Sbjct: 308 NGRLNSGHYTAVASHLRSDKWLRFDDSVVTPC 339
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = -2
Query: 627 YTLHAVLVHSGDNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHM 448
Y L +V+VHSG+ GGHY +I +W F+D V T E IE ++GG +
Sbjct: 404 YELFSVMVHSGNAAGGHYFAYIKNLDQDRWYVFNDTRVDFATPLE-IEKSFGGHPSGWNQ 462
Query: 447 ARKATSAYMLIY 412
+ T+AYML+Y
Sbjct: 463 SN--TNAYMLMY 472
>Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical
protein R10E11.3b protein.
Length = 414
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGD 592
P +L LHL RF++ + K + R F E+ L + Y L A +VH G
Sbjct: 265 PQLLALHLKRFKFVEPLNRHTKLSYRVVFPLELRLFNVSDDAEYGDRMYDLVATVVHCGA 324
Query: 591 N-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDA 457
+ GHY+ + K + W FDDD+V + E++ G DA
Sbjct: 325 TPNRGHYITLV--KSNSFWLVFDDDIVEKLEVSSMEEFS-GMSTDA 367
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGD 592
P +L LHL RF++ + K + R F E+ L + Y L A +VH G
Sbjct: 277 PQLLALHLKRFKFVEPLNRHTKLSYRVVFPLELRLFNVSDDAEYGDRMYDLVATVVHCGA 336
Query: 591 N-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDA 457
+ GHY+ + K + W FDDD+V + E++ G DA
Sbjct: 337 TPNRGHYITLV--KSNSFWLVFDDDIVEKLEVSSMEEFS-GMSTDA 379
>AF100663-4|AAC68982.2| 440|Caenorhabditis elegans Hypothetical
protein K08B4.5 protein.
Length = 440
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/133 (22%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPS----TPSHYTLHAVLV 604
P V+ + ++R + + K +D+FEF I++D +L++ T Y LHA++V
Sbjct: 93 PKVVFIEVMRTTVIDEH--ATKIHDKFEFPFHIHMDNFLEDASEDSQQTLHKYNLHAIIV 150
Query: 603 HSGDNHGGHYVVFINPKGD-------GKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHMA 445
H G++ GH++ + + + + +W K DD + + + + ++G +
Sbjct: 151 HLGEDGKGHFMTYRSIRNNCDVEGLATQWVKLDDAISTIIQRDQIASQSFGSG------S 204
Query: 444 RKATSAYMLIYIQ 406
+ +SA +L+++Q
Sbjct: 205 NEDSSAVLLMFLQ 217
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 44.8 bits (101), Expect = 8e-05
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDP-QRDASVKFNDRFEFYEEINLDPYL-QEVPSTPSHYTLHAVLVHS 598
P VL LH+ RF+ + + DA + F ++++ +L + P Y+L +++VH
Sbjct: 592 PQVLCLHMKRFRDNGGKNDAIIDFP-----MGQLDVTQFLTDDSDEAPCTYSLQSIIVHI 646
Query: 597 GDNHG-GHYVVFINPKGDGKWCKFDDDVV 514
G G GHY+ F K +G+W +FDD VV
Sbjct: 647 GYGCGSGHYIAF--GKRNGRWFQFDDTVV 673
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical protein
F07A11.4 protein.
Length = 1095
Score = 43.6 bits (98), Expect = 2e-04
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDP---QRDASVKFNDR--FEF-YEEINLDPYLQEVPSTPSH--YTLH 616
PPVL + L RF Y Q + + D E+ E +++ P+L E P+ Y L
Sbjct: 950 PPVLIIQLKRFVYTAFTYQSSMARRSKDTRSVEYPLESLDMSPFLAETSPHPNSTMYDLT 1009
Query: 615 AVLVHSGDNHGGHYVV------FINPKGDGKWCKFDDDVVSR 508
V+ HSG+++ GHY+ F + K +W FDD V+R
Sbjct: 1010 GVVCHSGNSYFGHYISMGRLADFDSSKTKIEWRNFDDSTVAR 1051
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 636 PSHYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRC 505
P+ Y L +VH G + GHYV + + D +W KFDD VV+RC
Sbjct: 486 PALYDLVGFVVHEGRSLEFGHYVSYCRHEQDNQWYKFDDMVVTRC 530
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Frame = -2
Query: 822 RARPTGSREXA*DSMCSPPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQ--- 652
+ TG D + PPV+ + L R++Y + K + EI + +
Sbjct: 283 KCNKTGDVSKQSDYVKLPPVIVIQLNRYKYTSK--GRQKLKTPMAYPREIPAKAFQRTNN 340
Query: 651 EVPSTPSHYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIE 484
+P Y L AV +H G+N GHY I + KW +++D+ V K E
Sbjct: 341 SIPPPAEMYDLFAVTIHEGNNAECGHYYDLIKSPLNQKWYRYNDETVEAIPKPPGTE 397
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Frame = -2
Query: 822 RARPTGSREXA*DSMCSPPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQ--- 652
+ TG D + PPV+ + L R++Y + K + EI + +
Sbjct: 283 KCNKTGDVSKQSDYVKLPPVIVIQLNRYKYTSK--GRQKLKTPMAYPREIPAKAFQRTNN 340
Query: 651 EVPSTPSHYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIE 484
+P Y L AV +H G+N GHY I + KW +++D+ V K E
Sbjct: 341 SIPPPAEMYDLFAVTIHEGNNAECGHYYDLIKSPLNQKWYRYNDETVEAIPKPPGTE 397
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 627 YTLHAVLVHSG-DNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGG 469
Y L ++ H G + GHYV ++ DGKW FDD+ V+ +EAI GG
Sbjct: 392 YDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVT-VVDEEAILKTSGG 444
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 627 YTLHAVLVHSG-DNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGG 469
Y L ++ H G + GHYV ++ DGKW FDD+ V+ +EAI GG
Sbjct: 392 YDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVT-VVDEEAILKTSGG 444
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 627 YTLHAVLVHSG-DNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGG 469
Y L ++ H G + GHYV ++ DGKW FDD+ V+ +EAI GG
Sbjct: 392 YDLKGIMTHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVT-VVDEEAILKTSGG 444
>AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical
protein F59E12.6b protein.
Length = 452
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -2
Query: 630 HYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAP 454
+Y L ++VH G + GH+ F+ +W KFDDD VS ++ ++G
Sbjct: 278 YYKLTGLIVHVGSSAKEGHFYSFVLQNESSRWSKFDDDRVSNVRWEDVAAQSFGTG---- 333
Query: 453 HMARKATSAYMLIY 412
+ K SA +L+Y
Sbjct: 334 --SSKTASACLLVY 345
>AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical
protein F59E12.6a protein.
Length = 499
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -2
Query: 630 HYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAP 454
+Y L ++VH G + GH+ F+ +W KFDDD VS ++ ++G
Sbjct: 325 YYKLTGLIVHVGSSAKEGHFYSFVLQNESSRWSKFDDDRVSNVRWEDVAAQSFGTG---- 380
Query: 453 HMARKATSAYMLIY 412
+ K SA +L+Y
Sbjct: 381 --SSKTASACLLVY 392
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 35.9 bits (79), Expect = 0.036
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -2
Query: 729 PQRDASVKFNDR-FEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDN-HGGHYVVFINP 556
P+R K N ++E++ + YL+ P Y+L AV+ H GD+ + GHYV +
Sbjct: 725 PERSPMKKENTNGSSMHDELDENDYLKS-DIHPGTYSLVAVVCHLGDSPNKGHYVAYTKE 783
Query: 555 -KGDGKWCKFDDDVVSRCTKQEAIE 484
+ W + DD + +K + E
Sbjct: 784 LYKNSSWLRCSDDNIYAVSKNDVSE 808
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 35.9 bits (79), Expect = 0.036
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -2
Query: 729 PQRDASVKFNDR-FEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDN-HGGHYVVFINP 556
P+R K N ++E++ + YL+ P Y+L AV+ H GD+ + GHYV +
Sbjct: 725 PERSPMKKENTNGSSMHDELDENDYLKS-DIHPGTYSLVAVVCHLGDSPNKGHYVAYTKE 783
Query: 555 -KGDGKWCKFDDDVVSRCTKQEAIE 484
+ W + DD + +K + E
Sbjct: 784 LYKNSSWLRCSDDNIYAVSKNDVSE 808
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 33.5 bits (73), Expect = 0.19
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSH----YTLHAVLV 604
P +L LHL RFQY + + LD L + + P+H Y L AV
Sbjct: 740 PEILILHLKRFQYTKWSREKLTWEVVIPVR---GLD--LTDKVANPNHEKAIYDLIAVSR 794
Query: 603 HSGDNHGGHYVVFINPKGDGKWCKFDD 523
H G GGHY + KW F+D
Sbjct: 795 HYGSLSGGHYTAIGYNDREQKWFDFND 821
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 627 YTLHAVLVHSGDNH-GGHYVVFINPKGDGKWCKFDDDVVSRCTKQE 493
Y+L A + H G+ GHY+ + + W DD++ T+ E
Sbjct: 453 YSLVAAICHLGETPTNGHYIAYTREDTENSWLYCSDDLIRPATRSE 498
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 31.5 bits (68), Expect = 0.77
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Frame = -2
Query: 636 PSHYTLHAVLVHSGDNHGGHYVVFINPKGD--------GKWCKFDDDVVSRCTKQEAIEY 481
P Y L VL HSG GHY FI + + KW +D +VS + +
Sbjct: 2089 PLIYELVGVLAHSGIATAGHYYSFIKERREEFRDSPHYNKWHHINDMIVSPMSFNNIEDL 2148
Query: 480 NYGG--KEDAPHMARKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINE 328
YGG ++ + + Y+ + K +D + IP + DR+N+
Sbjct: 2149 WYGGTFTQEGVFIGLDERVRHWNAYVLFYEKK---RDEPTALIPRHIIDRLND 2198
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHY 625
P + + L RF YD + K N F F EI++ PY+ P +
Sbjct: 1962 PSTMTIQLKRFTYDLVNNMIRKDNQLFRFPFEIDMTPYMTTSRHVPDEH 2010
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 31.5 bits (68), Expect = 0.77
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Frame = -2
Query: 636 PSHYTLHAVLVHSGDNHGGHYVVFINPKGD--------GKWCKFDDDVVSRCTKQEAIEY 481
P Y L VL HSG GHY FI + + KW +D +VS + +
Sbjct: 2086 PLIYELVGVLAHSGIATAGHYYSFIKERREEFRDSPHYNKWHHINDMIVSPMSFNNIEDL 2145
Query: 480 NYGG--KEDAPHMARKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINE 328
YGG ++ + + Y+ + K +D + IP + DR+N+
Sbjct: 2146 WYGGTFTQEGVFIGLDERVRHWNAYVLFYEKK---RDEPTALIPRHIIDRLND 2195
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHY 625
P + + L RF YD + K N F F EI++ PY+ P +
Sbjct: 1959 PSTMTIQLKRFTYDLVNNMIRKDNQLFRFPFEIDMTPYMTTSRHVPDEH 2007
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 31.5 bits (68), Expect = 0.77
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Frame = -2
Query: 636 PSHYTLHAVLVHSGDNHGGHYVVFINPKGD--------GKWCKFDDDVVSRCTKQEAIEY 481
P Y L VL HSG GHY FI + + KW +D +VS + +
Sbjct: 2089 PLIYELVGVLAHSGIATAGHYYSFIKERREEFRDSPHYNKWHHINDMIVSPMSFNNIEDL 2148
Query: 480 NYGG--KEDAPHMARKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINE 328
YGG ++ + + Y+ + K +D + IP + DR+N+
Sbjct: 2149 WYGGTFTQEGVFIGLDERVRHWNAYVLFYEKK---RDEPTALIPRHIIDRLND 2198
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHY 625
P + + L RF YD + K N F F EI++ PY+ P +
Sbjct: 1962 PSTMTIQLKRFTYDLVNNMIRKDNQLFRFPFEIDMTPYMTTSRHVPDEH 2010
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 31.5 bits (68), Expect = 0.77
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Frame = -2
Query: 636 PSHYTLHAVLVHSGDNHGGHYVVFINPKGD--------GKWCKFDDDVVSRCTKQEAIEY 481
P Y L VL HSG GHY FI + + KW +D +VS + +
Sbjct: 2086 PLIYELVGVLAHSGIATAGHYYSFIKERREEFRDSPHYNKWHHINDMIVSPMSFNNIEDL 2145
Query: 480 NYGG--KEDAPHMARKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINE 328
YGG ++ + + Y+ + K +D + IP + DR+N+
Sbjct: 2146 WYGGTFTQEGVFIGLDERVRHWNAYVLFYEKK---RDEPTALIPRHIIDRLND 2195
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 771 PPVLHLHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHY 625
P + + L RF YD + K N F F EI++ PY+ P +
Sbjct: 1959 PSTMTIQLKRFTYDLVNNMIRKDNQLFRFPFEIDMTPYMTTSRHVPDEH 2007
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 627 YTLHAVLVHSGDNHGGHYVVFINPKGDGKWCKFDD 523
Y L A +VH G G+Y + I +G GKW + +D
Sbjct: 528 YDLVANVVHEGTFKDGNYRIQIVHEGSGKWFELED 562
>U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical
protein K03C7.3 protein.
Length = 191
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 211 F*CAKYLGVAFCGRDRRVRFKFLALYFSAACSYHLVSHFFVDSIT 345
F C L FC R ++ RF L FS CS ++ FF+ T
Sbjct: 23 FECVTLLKSVFCARKKKKRFFLSFLSFSTCCS--ILGWFFLSHST 65
>U53155-1|AAC48268.1| 393|Caenorhabditis elegans Oocyte maturation
defective protein2 protein.
Length = 393
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 500 SRKPSNTTTAGRKTPLTWPGKPQALTCLSTFKL 402
S+KP T AG + P +WP P L + +
Sbjct: 253 SKKPLETEEAGNRPPSSWPLDPSTFFALDSLNM 285
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,149,002
Number of Sequences: 27780
Number of extensions: 406528
Number of successful extensions: 1077
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -