Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15f07
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 33 0.34
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 32 0.60
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 32 0.60
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 31 0.79
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 31 0.79
AC006603-6|ABB51200.1| 534|Caenorhabditis elegans Hypothetical ... 31 1.0
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 31 1.4
U97194-1|AAK68236.1| 788|Caenorhabditis elegans Prion-like-(q/n... 31 1.4
AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative MAP-... 31 1.4
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 30 1.8
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 30 2.4
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 30 2.4
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 30 2.4
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 3.2
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonin... 29 3.2
AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical ... 29 3.2
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 29 4.2
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 29 4.2
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 28 7.4
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 28 7.4
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 28 7.4
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 28 9.7
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 28 9.7
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 28 9.7
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 28 9.7
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 28 9.7
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 32.7 bits (71), Expect = 0.34
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Frame = -3
Query: 812 ETTSPQHQTVLLLENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIV----DTIQLCV 645
E Q T LLE++ + EE + S + L++VEQ D + Q+ V
Sbjct: 696 EFKEDQQSTSNLLEDDTG-IDNFVKNEEGAEAGYSNGTPLDQVEQNDYENIEKEEPQVSV 754
Query: 644 KPEDTTLDEPSMISDPSDFPTTIKREVTDDLPPPSDDFVDLDQPTDFTFPSIVKEEPIEP 465
PE ++ +D ++P + + P+++ V+ +P D + P + + P++
Sbjct: 755 DPEPVEVEAQQEPADTEEYPIPSVGTIEEPAEEPAEEPVEEPEPMDDSSP-VDQSTPVKA 813
Query: 464 D 462
D
Sbjct: 814 D 814
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
C18D4.2b protein.
Length = 1376
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = -3
Query: 773 ENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDPS 594
E +D++ ++ +E L S SS++E + +K ++ +L L +SD
Sbjct: 975 EENSDNIMLKYAIELSLLDSKKDSSKIEAITKKLTLELAKL-------KLGITQSLSDSK 1027
Query: 593 DFPTTIKREVTDDLPPPSDD 534
+ P+T + DDLP SD+
Sbjct: 1028 EDPSTNEASPEDDLPSTSDN 1047
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = -3
Query: 773 ENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDPS 594
E +D++ ++ +E L S S+++E + +K + +L L +S+
Sbjct: 674 EENSDNIMLKYAIELSLLDSKKDSTKIEAIPEKLKFELAKL-------KLGLMKSLSNSK 726
Query: 593 DFPTTIKREVTDDLPPPSDD 534
D P+T + +DLP SDD
Sbjct: 727 DDPSTNGASLQNDLPSTSDD 746
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = -3
Query: 773 ENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDPS 594
E +D++ ++ +E L S SS++E + +K ++ +L L +SD
Sbjct: 975 EENSDNIMLKYAIELSLLDSKKDSSKIEAITKKLTLELAKL-------KLGITQSLSDSK 1027
Query: 593 DFPTTIKREVTDDLPPPSDD 534
+ P+T + DDLP SD+
Sbjct: 1028 EDPSTNEASPEDDLPSTSDN 1047
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = -3
Query: 773 ENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDPS 594
E +D++ ++ +E L S S+++E + +K + +L L +S+
Sbjct: 674 EENSDNIMLKYAIELSLLDSKKDSTKIEAIPEKLKFELAKL-------KLGLMKSLSNSK 726
Query: 593 DFPTTIKREVTDDLPPPSDD 534
D P+T + +DLP SDD
Sbjct: 727 DDPSTNGASLQNDLPSTSDD 746
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = -3
Query: 773 ENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDPS 594
E +D++ ++ +E L S SS++E + +K ++ +L L +SD
Sbjct: 975 EENSDNIMLKYAIELSLLDSKKDSSKIEAITKKLTLELAKL-------KLGITQSLSDSK 1027
Query: 593 DFPTTIKREVTDDLPPPSDD 534
+ P+T + DDLP SD+
Sbjct: 1028 EDPSTNEASPEDDLPSTSDN 1047
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = -3
Query: 773 ENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDPS 594
E +D++ ++ +E L S S+++E + +K + +L L +S+
Sbjct: 674 EENSDNIMLKYAIELSLLDSKKDSTKIEAIPEKLKFELAKL-------KLGLMKSLSNSK 726
Query: 593 DFPTTIKREVTDDLPPPSDD 534
D P+T + +DLP SDD
Sbjct: 727 DDPSTNGASLQNDLPSTSDD 746
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = -3
Query: 773 ENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDPS 594
E +D++ ++ +E L S SS++E + +K ++ +L L +SD
Sbjct: 975 EENSDNIMLKYAIELSLLDSKKDSSKIEAITKKLTLELAKL-------KLGITQSLSDSK 1027
Query: 593 DFPTTIKREVTDDLPPPSDD 534
+ P+T + DDLP SD+
Sbjct: 1028 EDPSTNEASPEDDLPSTSDN 1047
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = -3
Query: 773 ENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDPS 594
E +D++ ++ +E L S S+++E + +K + +L L +S+
Sbjct: 674 EENSDNIMLKYAIELSLLDSKKDSTKIEAIPEKLKFELAKL-------KLGLMKSLSNSK 726
Query: 593 DFPTTIKREVTDDLPPPSDD 534
D P+T + +DLP SDD
Sbjct: 727 DDPSTNGASLQNDLPSTSDD 746
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 31.5 bits (68), Expect = 0.79
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = -3
Query: 683 EQKDIVDTIQLCVKPEDTTLDEPSMISDPSDFPTTIKREVTDDLP--PPSDDFVDLDQPT 510
++KD+ I++ V E + EP+ + P D + T LP P +D V+ ++PT
Sbjct: 126 DEKDVPVNIEVAVLEEKSIQIEPTSPAHPED-----PQPSTSSLPLVEPIEDIVEPNEPT 180
Query: 509 DFTFPSI--VKEEPIEPDMNMV--PAMIES 432
P + +K+E I+ + ++ PA ES
Sbjct: 181 SSADPPVSNIKDEDIKEEEPLIKKPASDES 210
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 31.5 bits (68), Expect = 0.79
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = -3
Query: 683 EQKDIVDTIQLCVKPEDTTLDEPSMISDPSDFPTTIKREVTDDLP--PPSDDFVDLDQPT 510
++KD+ I++ V E + EP+ + P D + T LP P +D V+ ++PT
Sbjct: 140 DEKDVPVNIEVAVLEEKSIQIEPTSPAHPED-----PQPSTSSLPLVEPIEDIVEPNEPT 194
Query: 509 DFTFPSI--VKEEPIEPDMNMV--PAMIES 432
P + +K+E I+ + ++ PA ES
Sbjct: 195 SSADPPVSNIKDEDIKEEEPLIKKPASDES 224
>AC006603-6|ABB51200.1| 534|Caenorhabditis elegans Hypothetical
protein B0524.1 protein.
Length = 534
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 569 EVTDDLPPPSDDFVDLDQPTDFTFPSIVKEEPIEPD 462
E + + P DD + ++PTDF+ ++VK+E I D
Sbjct: 470 ESSSEASEPPDDVITKEEPTDFSEENLVKKEEICDD 505
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = -3
Query: 848 PHGREARPG--APAETTSPQHQTVLLLENEADHVKIRTVLEEDLQYSDSGSSELEEVEQK 675
P E +P AP P +T H + T +ED + + E +++E
Sbjct: 16 PSDSEDKPSISAPPPLPPPLQETPEFQTTYDAHDQAETSGKEDGELDED--DENDDIEPM 73
Query: 674 DIVDTIQLCV--KPEDTTLDEPSMISDPSD 591
+I + IQL + KPED DE IS+P+D
Sbjct: 74 EIDEEIQLEIDEKPEDLVKDE--QISEPTD 101
>U97194-1|AAK68236.1| 788|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform a protein.
Length = 788
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = -3
Query: 848 PHGREARPG--APAETTSPQHQTVLLLENEADHVKIRTVLEEDLQYSDSGSSELEEVEQK 675
P E +P AP P +T H + T +ED + + E +++E
Sbjct: 16 PSDSEDKPSISAPPPLPPPLQETPEFQTTYDAHDQAETSGKEDGELDED--DENDDIEPM 73
Query: 674 DIVDTIQLCV--KPEDTTLDEPSMISDPSD 591
+I + IQL + KPED DE IS+P+D
Sbjct: 74 EIDEEIQLEIDEKPEDLVKDE--QISEPTD 101
>AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative
MAP-like protein protein.
Length = 788
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = -3
Query: 848 PHGREARPG--APAETTSPQHQTVLLLENEADHVKIRTVLEEDLQYSDSGSSELEEVEQK 675
P E +P AP P +T H + T +ED + + E +++E
Sbjct: 16 PSDSEDKPSISAPPPLPPPLQETPEFQTTYDAHDQAETSGKEDGELDED--DENDDIEPM 73
Query: 674 DIVDTIQLCV--KPEDTTLDEPSMISDPSD 591
+I + IQL + KPED DE IS+P+D
Sbjct: 74 EIDEEIQLEIDEKPEDLVKDE--QISEPTD 101
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical
protein B0207.5 protein.
Length = 3279
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 734 EEDLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTL 624
E + +D S +L E+ +K+ + I LC P DTTL
Sbjct: 687 ESNASDTDCDSKDLVEMSRKEFLKHITLCGNPVDTTL 723
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -3
Query: 728 DLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDPSDFPTTIKREVTDDLP 549
D++ S+ S +V + + V T+Q DEP ++SD S T E+
Sbjct: 1085 DVETSEGSSQTAMQVSETE-VQTMQQEFVVATMQTDEPLLVSDESQTEQTKSSEIDSQTD 1143
Query: 548 PPS 540
PPS
Sbjct: 1144 PPS 1146
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -3
Query: 728 DLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDPSDFPTTIKREVTDDLP 549
D++ S+ S +V + + V T+Q DEP ++SD S T E+
Sbjct: 1085 DVETSEGSSQTAMQVSETE-VQTMQQEFVVATMQTDEPLLVSDESQTEQTKSSEIDSQTD 1143
Query: 548 PPS 540
PPS
Sbjct: 1144 PPS 1146
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -3
Query: 728 DLQYSDSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDPSDFPTTIKREVTDDLP 549
D++ S+ S +V + + V T+Q DEP ++SD S T E+
Sbjct: 1085 DVETSEGSSQTAMQVSETE-VQTMQQEFVVATMQTDEPLLVSDESQTEQTKSSEIDSQTD 1143
Query: 548 PPS 540
PPS
Sbjct: 1144 PPS 1146
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 791 QTVLLLENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIV 666
QTV+ +E D KIR + +EDLQ D + QK+++
Sbjct: 706 QTVISIEKSTDIDKIRLMRKEDLQVIDKCPPRAPVILQKELL 747
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 791 QTVLLLENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIV 666
QTV+ +E D KIR + +EDLQ D + QK+++
Sbjct: 706 QTVISIEKSTDIDKIRLMRKEDLQVIDKCPPRAPVILQKELL 747
>Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 856
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPSDDFVDLDQPTDFTF-PSIVKEEPIE 468
T LD P+ + + P +R +T +P P + + TDFTF P + P++
Sbjct: 317 TKLDSPTPVRRIGESPRVQRRVITPGMPSPVPG-APMQESTDFTFLPPRQESSPVK 371
>AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical
protein Y60A3A.1 protein.
Length = 856
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPSDDFVDLDQPTDFTF-PSIVKEEPIE 468
T LD P+ + + P +R +T +P P + + TDFTF P + P++
Sbjct: 317 TKLDSPTPVRRIGESPRVQRRVITPGMPSPVPG-APMQESTDFTFLPPRQESSPVK 371
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPS 540
T++ EP+++ +P PT+ RE +D+PPP+
Sbjct: 2182 TSVPEPNVVVEPIPGPTS-AREERNDVPPPA 2211
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPS 540
T++ EP+++ +P PT+ RE +D+PPP+
Sbjct: 2204 TSVPEPNVVVEPIPGPTS-AREERNDVPPPA 2233
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPS 540
T++ EP+++ +P PT+ RE +D+PPP+
Sbjct: 1995 TSVPEPNVVVEPIPGPTS-AREERNDVPPPA 2024
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPS 540
T++ EP+++ +P PT+ RE +D+PPP+
Sbjct: 2302 TSVPEPNVVVEPIPGPTS-AREERNDVPPPA 2331
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPS 540
T++ EP+++ +P PT+ RE +D+PPP+
Sbjct: 2182 TSVPEPNVVVEPIPGPTS-AREERNDVPPPA 2211
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPS 540
T++ EP+++ +P PT+ RE +D+PPP+
Sbjct: 2204 TSVPEPNVVVEPIPGPTS-AREERNDVPPPA 2233
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPS 540
T++ EP+++ +P PT+ RE +D+PPP+
Sbjct: 1995 TSVPEPNVVVEPIPGPTS-AREERNDVPPPA 2024
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPS 540
T++ EP+++ +P PT+ RE +D+PPP+
Sbjct: 2302 TSVPEPNVVVEPIPGPTS-AREERNDVPPPA 2331
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPS 540
T++ EP+++ +P PT+ RE +D+PPP+
Sbjct: 2013 TSVPEPNVVVEPIPGPTS-AREERNDVPPPA 2042
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPPS 540
T++ EP+++ +P PT+ RE +D+PPP+
Sbjct: 1977 TSVPEPNVVVEPIPGPTS-AREERNDVPPPA 2006
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 28.3 bits (60), Expect = 7.4
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Frame = -3
Query: 713 DSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDP-SDFPTTIKREVTDDLPPPSD 537
D + + E+ ++++ +D + KPED ++P I DP + P E+ + PP
Sbjct: 205 DPDAKKPEDWDEREYIDDAE-DAKPEDW--EKPEHIPDPDAKKPEDWDDEMDGEWEPPMI 261
Query: 536 DFVDLD---QPTDFTFPSIVKEEPIEPDMNMVPAMIESHMXXXXXXXXXXXENWQ-PDPA 369
D + +P P+ K + I P++ + + + WQ
Sbjct: 262 DNPEYKGEWKPKQIKNPAY-KGKWIHPEIENPEYTPDDELYSYESWGAIGFDLWQVKSGT 320
Query: 368 IQDDLQVTDSEEEAE 324
I D++ +TDS EEAE
Sbjct: 321 IFDNIIITDSVEEAE 335
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 846 PRTRSAAGGARGNHKPSTSDGATPRKRGRPRKDQNSFGRRSS 721
PRTRS G+R + + + + R+R R R + GRR+S
Sbjct: 138 PRTRS---GSRSSSRSRSGSRRSSRRRSRHRSSSKARGRRAS 176
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 846 PRTRSAAGGARGNHKPSTSDGATPRKRGRPRKDQNSFGRRSS 721
PRTRS G+R + + + + R+R R R + GRR+S
Sbjct: 138 PRTRS---GSRSSSRSRSGSRRSSRRRSRRRSSSKARGRRAS 176
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 28.3 bits (60), Expect = 7.4
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Frame = -3
Query: 713 DSGSSELEEVEQKDIVDTIQLCVKPEDTTLDEPSMISDP-SDFPTTIKREVTDDLPPPSD 537
D + + E+ ++++ +D + KPED ++P I DP + P E+ + PP
Sbjct: 205 DPDAKKPEDWDEREYIDDAE-DAKPEDW--EKPEHIPDPDAKKPEDWDDEMDGEWEPPMI 261
Query: 536 DFVDLD---QPTDFTFPSIVKEEPIEPDMNMVPAMIESHMXXXXXXXXXXXENWQ-PDPA 369
D + +P P+ K + I P++ + + + WQ
Sbjct: 262 DNPEYKGEWKPKQIKNPAY-KGKWIHPEIENPEYTPDDELYSYESWGAIGFDLWQVKSGT 320
Query: 368 IQDDLQVTDSEEEAE 324
I D++ +TDS EEAE
Sbjct: 321 IFDNIIITDSVEEAE 335
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 27.9 bits (59), Expect = 9.7
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Frame = -3
Query: 812 ETTSPQHQTVLLLENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDIVDTIQLCVKPED 633
E TSP + T + E + T + S S + E I ++ +
Sbjct: 192 EQTSPDNTTEIASPMETNTTTEATTTSVEPSVSTLASED--ETTVTAIAESTTTVIAEVS 249
Query: 632 TTLDEPSMISDPSDFPTTIKREVTDDLPPP--SDDFVDLDQPTDFTFPSIVK-EEPIEP 465
TT +EP+ ++ + +T K T + P P +++ + T T S E+P P
Sbjct: 250 TTTEEPTTTAESTTKKSTTKAPATTEEPTPTTTEEVTTTEAETSTTTSSETSTEKPTTP 308
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = -3
Query: 851 PPHGREARPGAPAETTSPQHQTVLLLENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKD 672
PPH P P E Q L L D+ I LE+D Y D SE E+ E
Sbjct: 159 PPH--HPPPPPPVEEKLDQVLIPLKLSRGQDYAPIYRSLEQDTYY-DQSPSESEKDEDLG 215
Query: 671 IVDT 660
+ +T
Sbjct: 216 LTNT 219
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = -3
Query: 851 PPHGREARPGAPAETTSPQHQTVLLLENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKD 672
PPH P P E Q L L D+ I LE+D Y D SE E+ E
Sbjct: 114 PPH--HPPPPPPVEEKLDQVLIPLKLSRGQDYAPIYRSLEQDTYY-DQSPSESEKDEDLG 170
Query: 671 IVDT 660
+ +T
Sbjct: 171 LTNT 174
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = -3
Query: 851 PPHGREARPGAPAETTSPQHQTVLLLENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKD 672
PPH P P E Q L L D+ I LE+D Y D SE E+ E
Sbjct: 209 PPH--HPPPPPPVEEKLDQVLIPLKLSRGQDYAPIYRSLEQDTYY-DQSPSESEKDEDLG 265
Query: 671 IVDT 660
+ +T
Sbjct: 266 LTNT 269
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 27.9 bits (59), Expect = 9.7
Identities = 27/107 (25%), Positives = 38/107 (35%)
Frame = -3
Query: 848 PHGREARPGAPAETTSPQHQTVLLLENEADHVKIRTVLEEDLQYSDSGSSELEEVEQKDI 669
P + P AE Q L+ E K + + S SSE EVE+K
Sbjct: 85 PPAKSGVPAKSAEKAKEGSQRSARLKKEQKSEKKKKEGSQRSARSKKASSEKPEVEKK-- 142
Query: 668 VDTIQLCVKPEDTTLDEPSMISDPSDFPTTIKREVTDDLPPPSDDFV 528
+ V+ E T E + +P+ P V PPP + V
Sbjct: 143 --PEEPPVEDEAKTPPEKPKVEEPAPAPAPAPAAVAPAPPPPPEPAV 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,454,738
Number of Sequences: 27780
Number of extensions: 429558
Number of successful extensions: 1690
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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