Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15e24
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin...    44   1e-04
Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin
           converting enzyme)-like non-peptidase protein 1, isoform
           a protein.
          Length = 906

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 21/67 (31%), Positives = 35/67 (52%)
 Frame = -2

Query: 714 LNRLMERGSSAPWTHILQEAIGESRLNGEAMRDYFRPLEDWLSSENLRTGEFLGWSYDGD 535
           L   M+ GSS  W   L+   G+  L+ + + +Y+ PL +WL + N      +GW  DG+
Sbjct: 710 LRETMKLGSSITWLKALEMISGKGELDAQPLLEYYEPLINWLRNTNEIDQVVVGW--DGE 767

Query: 534 YCKFSIE 514
              F++E
Sbjct: 768 GTPFTVE 774


>Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical
           protein E01G4.4 protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 780 PGDPTRPLHKCDIYRNPEAGRILNRLMERGSSAP 679
           PG P    ++ D+Y+NP+AG   N   ++    P
Sbjct: 14  PGQPPAQQNQDDLYQNPQAGYGYNNQQQQQQGRP 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,444,610
Number of Sequences: 27780
Number of extensions: 357186
Number of successful extensions: 765
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)