Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15e17
(805 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein... 272 3e-73
Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical pr... 270 6e-73
Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical pr... 260 6e-70
Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical pr... 260 6e-70
Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical pr... 260 6e-70
Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical pr... 260 6e-70
Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical pr... 260 6e-70
Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical pr... 260 6e-70
Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical p... 260 6e-70
Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical pr... 260 6e-70
X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein... 260 6e-70
U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein... 260 6e-70
U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein... 260 6e-70
U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein... 260 6e-70
U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protei... 260 6e-70
AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3 pr... 260 6e-70
AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone prote... 260 6e-70
AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone prote... 260 6e-70
Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical pr... 253 1e-67
Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical pr... 193 1e-49
Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical pr... 110 1e-24
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 106 2e-23
U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like... 30 2.2
AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3 ... 30 2.2
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical p... 29 2.9
Z29443-1|CAA82576.1| 649|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z29443-2|CAA82581.1| 648|Caenorhabditis elegans Hypothetical pr... 28 9.0
L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ... 28 9.0
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 28 9.0
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 28 9.0
>U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein 71
protein.
Length = 136
Score = 272 bits (666), Expect = 3e-73
Identities = 134/136 (98%), Positives = 135/136 (99%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical
protein Y49E10.6 protein.
Length = 136
Score = 270 bits (663), Expect = 6e-73
Identities = 133/136 (97%), Positives = 135/136 (99%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKD+QLARRIRGERA
Sbjct: 121 MPKDMQLARRIRGERA 136
>Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical
protein T10C6.13 protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.7 protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.3 protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.2 protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical
protein F54E12.1 protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical
protein F08G2.3 protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical
protein B0035.10 protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical
protein F22B3.2 protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein
protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein 6
protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein 17
protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein 27
protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protein
59 protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3
protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone protein
32 protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone protein
49 protein.
Length = 136
Score = 260 bits (638), Expect = 6e-70
Identities = 127/136 (93%), Positives = 133/136 (97%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRKQ ATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
>Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical
protein W05B10.1 protein.
Length = 136
Score = 253 bits (620), Expect = 1e-67
Identities = 126/136 (92%), Positives = 130/136 (95%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTKQTARKSTGGKAPRK ATKAARKSA TG VKK HR+RPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKALATKAARKSAIVTGSVKKVHRFRPGTVALREIRRYQKSTE 60
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LL+RKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLLRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 426 MPKDIQLARRIRGERA 379
MPKD+QLARRIRGER+
Sbjct: 121 MPKDMQLARRIRGERS 136
>Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical
protein E03A3.3 protein.
Length = 127
Score = 219 bits (535), Expect = 2e-57
Identities = 108/123 (87%), Positives = 114/123 (92%)
Frame = -2
Query: 750 GGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV 571
GGKAPRKQ ATKAARK+A G VKKPHR+RPGTVALREIRRYQKST+LL+RKLPFQRLV
Sbjct: 4 GGKAPRKQLATKAARKNAIVVGAVKKPHRFRPGTVALREIRRYQKSTDLLLRKLPFQRLV 63
Query: 570 REIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 391
REIAQD K DLRFQSAAI ALQEASE +LVGLFEDTNLCAIHAKRVTIMPKD+QLARRIR
Sbjct: 64 REIAQDVKQDLRFQSAAIQALQEASEYFLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIR 123
Query: 390 GER 382
GER
Sbjct: 124 GER 126
>Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical
protein E03A3.4 protein.
Length = 126
Score = 193 bits (471), Expect = 1e-49
Identities = 97/127 (76%), Positives = 109/127 (85%)
Frame = -2
Query: 786 MARTKQTARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 607
MARTK TARKS GGKAPRK ATKAARK P G VKK RYRP + AL+EIR+YQKSTE
Sbjct: 1 MARTKHTARKSFGGKAPRKSLATKAARKVFPVDGQVKK--RYRPSSNALKEIRKYQKSTE 58
Query: 606 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 427
LL+RKLPFQRLVRE+AQ+ ++RFQSAAI AL EA+EAYL+GLFEDTNLCAIHAKRVTI
Sbjct: 59 LLVRKLPFQRLVREVAQEIMPNVRFQSAAIQALHEAAEAYLIGLFEDTNLCAIHAKRVTI 118
Query: 426 MPKDIQL 406
MPKD+Q+
Sbjct: 119 MPKDMQV 125
>Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical
protein F58A4.3 protein.
Length = 288
Score = 113 bits (272), Expect = 1e-25
Identities = 63/127 (49%), Positives = 80/127 (62%), Gaps = 3/127 (2%)
Frame = -2
Query: 765 ARKSTGGKAPRKQPATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLP 586
A S + R P++ + V K RYRPG AL EIR+YQK+ +LLI+K P
Sbjct: 157 AGPSNPDRGNRTGPSSSDRVRMRAGRNRVTKTRRYRPGQKALEEIRKYQKTEDLLIQKAP 216
Query: 585 FQRLVREIAQD---FKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD 415
F RLVREI Q F D R +S AI ALQEA+EA+LV +FE ++L + HAKRVT+M D
Sbjct: 217 FARLVREIMQTSTPFGADCRIRSDAISALQEAAEAFLVEMFEGSSLISTHAKRVTLMTTD 276
Query: 414 IQLARRI 394
IQL RR+
Sbjct: 277 IQLYRRL 283
>U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical
protein F20D6.9 protein.
Length = 118
Score = 110 bits (264), Expect = 1e-24
Identities = 58/97 (59%), Positives = 71/97 (73%)
Frame = -2
Query: 675 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEAS 496
+ + + GTVALREIR+ Q+STELLI + F+RLV+E+AQDF TDL F+ AI ALQ A
Sbjct: 20 RSYPFHSGTVALREIRKQQQSTELLIPRSRFERLVKELAQDFVTDLIFRKDAIDALQAAV 79
Query: 495 EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 385
E YLV LF NLCAI KRVTI +++ ARRIRGE
Sbjct: 80 EDYLVELFRLGNLCAIKCKRVTIEADNLKFARRIRGE 116
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 106 bits (255), Expect = 2e-23
Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
Frame = -2
Query: 681 VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQD---FKTDLRFQSAAIGA 511
+ K RYRPG AL EIR+YQ+S +LLI K PF RLVREI Q F +DLR +S AI A
Sbjct: 158 ISKTRRYRPGQKALEEIRKYQESEDLLIPKAPFARLVREIMQTSTPFSSDLRIRSDAINA 217
Query: 510 LQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 394
LQEASEA LV +F+ ++L + H+KR T+ D+QL RR+
Sbjct: 218 LQEASEALLVQMFDGSSLISAHSKRATLTTTDVQLYRRL 256
>U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like
protein 3 protein.
Length = 208
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 798 KK*TMARTKQTARKSTGGKAPRK--QPATKAARKSAPSTGGVKKPHRYRPGTVAL 640
KK T +TK+TA K K+P+K +P K KS KK +P A+
Sbjct: 150 KKTTATKTKKTADKVKKVKSPKKIAKPTAKKVAKSPAKKSAPKKAAAAKPAKKAV 204
>AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3
protein.
Length = 208
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 798 KK*TMARTKQTARKSTGGKAPRK--QPATKAARKSAPSTGGVKKPHRYRPGTVAL 640
KK T +TK+TA K K+P+K +P K KS KK +P A+
Sbjct: 150 KKTTATKTKKTADKVKKVKSPKKIAKPTAKKVAKSPAKKSAPKKAAAAKPAKKAV 204
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -2
Query: 654 GTVALREIRRYQKS--TELLIRKLPFQRLVREIAQDFKT 544
G + +E+++ ++ T+LL+R LPF+ V+E+ F+T
Sbjct: 732 GALKRKEVKQKEQGECTKLLVRNLPFEASVKEVETLFET 770
>Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical
protein F36A2.10 protein.
Length = 151
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -2
Query: 783 ARTKQTARKSTGGK--APRKQPATKAARKSAP 694
+R++ +R ST GK AP+K TKAAR +P
Sbjct: 94 SRSRSRSRSSTRGKKRAPKKAVTTKAARSISP 125
>Z29443-1|CAA82576.1| 649|Caenorhabditis elegans Hypothetical
protein T07C4.3a protein.
Length = 649
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 451 STQVGVFEQANEISLACLLESSDGGRLETQISFEILSDFSHKTLERQLTDKQLSRLLITT 630
ST G F+ + + ++ S G+ + ++ L HK +RQLT ++L+ + +
Sbjct: 33 STASGKFQPSVDGFTTFIVAVSRLGKQGQEFTWHDLRKVYHKETQRQLTAEELNAIFSSK 92
Query: 631 NFTK 642
N TK
Sbjct: 93 NLTK 96
>Z29443-2|CAA82581.1| 648|Caenorhabditis elegans Hypothetical
protein T07C4.3b protein.
Length = 648
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 451 STQVGVFEQANEISLACLLESSDGGRLETQISFEILSDFSHKTLERQLTDKQLSRLLITT 630
ST G F+ ++ + ++ S G+ + ++ L HK +RQLT ++L+ + +
Sbjct: 33 STASGKFQPSDGFT-TFIVAVSRLGKQGQEFTWHDLRKVYHKETQRQLTAEELNAIFSSK 91
Query: 631 NFTK 642
N TK
Sbjct: 92 NLTK 95
>L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform b
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 758 NLLEVKLRVNNLLQKRRENQRRALVESRSHI 666
+L E+K +++L + R+++RR +V S SHI
Sbjct: 811 DLHEIKQDISSLRYELRDDRRREIVRSSSHI 841
>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform a
protein.
Length = 1027
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 758 NLLEVKLRVNNLLQKRRENQRRALVESRSHI 666
+L E+K +++L + R+++RR +V S SHI
Sbjct: 791 DLHEIKQDISSLRYELRDDRRREIVRSSSHI 821
>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 1027
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -3
Query: 758 NLLEVKLRVNNLLQKRRENQRRALVESRSHI 666
+L E+K +++L + R+++RR +V S SHI
Sbjct: 791 DLHEIKQDISSLRYELRDDRRREIVRSSSHI 821
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,056,149
Number of Sequences: 27780
Number of extensions: 329510
Number of successful extensions: 820
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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