Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15e14
         (780 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U36584-1|AAA79949.1|  610|Drosophila melanogaster receptor tyros...    30   3.1  
L47260-1|AAA75347.1|  610|Drosophila melanogaster derailed recep...    30   3.1  
AY051852-1|AAK93276.1|  610|Drosophila melanogaster LD35237p pro...    30   3.1  
AE014134-3063|AAF53776.1|  610|Drosophila melanogaster CG17348-P...    30   3.1  

>U36584-1|AAA79949.1|  610|Drosophila melanogaster receptor tyrosine
           kinase protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = -2

Query: 215 VEGVCWSLYIKCNGRQHLTLD*ISNIGIILNVLKNRS---LYSRKKMSVTSHLDTA 57
           VE   W + +KC+G ++  +    N+ +IL+   N +   ++ RKK+ +    D+A
Sbjct: 108 VEPQTWGIALKCSGTRNAEVTVTINVEVILDRATNNNTNLIFKRKKICLREEQDSA 163


>L47260-1|AAA75347.1|  610|Drosophila melanogaster derailed receptor
           protein tyrosinekinase protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = -2

Query: 215 VEGVCWSLYIKCNGRQHLTLD*ISNIGIILNVLKNRS---LYSRKKMSVTSHLDTA 57
           VE   W + +KC+G ++  +    N+ +IL+   N +   ++ RKK+ +    D+A
Sbjct: 108 VEPQTWGIALKCSGTRNAEVTVTINVEVILDRATNNNTNLIFKRKKICLREEQDSA 163


>AY051852-1|AAK93276.1|  610|Drosophila melanogaster LD35237p
           protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = -2

Query: 215 VEGVCWSLYIKCNGRQHLTLD*ISNIGIILNVLKNRS---LYSRKKMSVTSHLDTA 57
           VE   W + +KC+G ++  +    N+ +IL+   N +   ++ RKK+ +    D+A
Sbjct: 108 VEPQTWGIALKCSGTRNAEVTVTINVEVILDRATNNNTNLIFKRKKICLREEQDSA 163


>AE014134-3063|AAF53776.1|  610|Drosophila melanogaster CG17348-PA
           protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = -2

Query: 215 VEGVCWSLYIKCNGRQHLTLD*ISNIGIILNVLKNRS---LYSRKKMSVTSHLDTA 57
           VE   W + +KC+G ++  +    N+ +IL+   N +   ++ RKK+ +    D+A
Sbjct: 108 VEPQTWGIALKCSGTRNAEVTVTINVEVILDRATNNNTNLIFKRKKICLREEQDSA 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,240,116
Number of Sequences: 53049
Number of extensions: 484057
Number of successful extensions: 912
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)