Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15d18
         (794 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102649-1|AAM27478.1|  176|Drosophila melanogaster GH01072p pro...   149   4e-36
AE014296-3052|AAF49235.1|  176|Drosophila melanogaster CG6884-PA...   149   4e-36

>AY102649-1|AAM27478.1|  176|Drosophila melanogaster GH01072p
           protein.
          Length = 176

 Score =  149 bits (361), Expect = 4e-36
 Identities = 71/108 (65%), Positives = 82/108 (75%)
 Frame = -1

Query: 650 PMERIQVLDEIEKDIITXXXXXXXXXLELSKEKSGQKQAESNTSQFLRTLSQVESKLSEQ 471
           P+++I  LDEIEK+II           EL KEKS QK AE+ + QFL++LS VESKLSEQ
Sbjct: 3   PLDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQ 62

Query: 470 INYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHVRSWVNELDRLKASH 327
           INYLTQVSTGQPHEGSGYAS KVLQMAWHR++H RS V EL+  KA H
Sbjct: 63  INYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110


>AE014296-3052|AAF49235.1|  176|Drosophila melanogaster CG6884-PA
           protein.
          Length = 176

 Score =  149 bits (361), Expect = 4e-36
 Identities = 71/108 (65%), Positives = 82/108 (75%)
 Frame = -1

Query: 650 PMERIQVLDEIEKDIITXXXXXXXXXLELSKEKSGQKQAESNTSQFLRTLSQVESKLSEQ 471
           P+++I  LDEIEK+II           EL KEKS QK AE+ + QFL++LS VESKLSEQ
Sbjct: 3   PLDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQ 62

Query: 470 INYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHVRSWVNELDRLKASH 327
           INYLTQVSTGQPHEGSGYAS KVLQMAWHR++H RS V EL+  KA H
Sbjct: 63  INYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,683,499
Number of Sequences: 53049
Number of extensions: 639662
Number of successful extensions: 1686
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)