Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15d17
(753 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1055 - 33798162-33798290,33798417-33798604,33798707-337987... 89 3e-18
12_02_0137 + 14153603-14153629,14154136-14154586,14155066-141552... 85 4e-17
09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230... 33 0.24
12_02_0193 + 15242068-15242265,15242356-15244589,15244675-152449... 32 0.43
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 31 0.74
11_06_0069 + 19770182-19770379,19770470-19772703,19772789-197730... 31 0.74
11_04_0270 - 15590955-15591146,15591421-15591502,15591592-155917... 31 0.74
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 31 0.74
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 31 0.74
09_02_0131 - 4693828-4694019,4694107-4694199,4694294-4694375,469... 31 0.74
08_02_0194 + 14084828-14085025,14085116-14085788,14085855-140870... 31 0.74
08_01_0440 + 3875422-3875619,3875710-3876382,3876449-3877943,387... 31 0.74
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 31 0.74
06_01_1155 + 9777611-9777808,9777899-9780132,9780218-9780469,978... 31 0.74
05_04_0345 + 20451497-20451740,20452078-20452159,20452837-204528... 31 0.74
05_01_0577 + 5159934-5160131,5160222-5162455,5162541-5162792,516... 31 0.74
05_01_0571 - 5067558-5067749,5068024-5068105,5068195-5068305,506... 31 0.74
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 31 0.74
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 31 0.74
02_01_0374 - 2702804-2702995,2703270-2703351,2703441-2703551,270... 31 0.74
01_06_0075 - 26201231-26201422,26201697-26201778,26201868-262019... 31 0.74
01_05_0224 + 19485296-19485493,19485584-19487817,19487903-194881... 31 0.74
07_01_0203 + 1469575-1470045 31 0.98
07_01_0199 - 1420982-1421452 31 0.98
07_01_0195 - 1387831-1388301 31 0.98
07_01_0191 - 1354678-1355148 31 0.98
07_01_0187 - 1321525-1321995 31 0.98
09_02_0601 + 11112201-11112386,11112471-11114080,11114345-111145... 30 1.7
08_02_0405 + 16790720-16791691,16792064-16792135,16794487-167946... 30 1.7
04_01_0365 - 4796780-4796971,4797246-4797327,4797417-4797527,479... 30 1.7
08_02_0307 - 15612761-15612856,15613879-15613950,15614325-15615290 30 2.3
11_06_0181 + 20985960-20987825,20987904-20989169 29 3.0
10_07_0154 + 13487971-13488168,13488259-13488483,13488592-134904... 29 3.0
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 29 3.0
09_02_0349 - 7632140-7632234,7632348-7632449,7632864-7632962,763... 29 3.0
06_01_1113 - 9164953-9165044,9166453-9166586,9166624-9166734,916... 29 3.0
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 29 3.0
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 29 4.0
11_01_0397 + 3006815-3007438 29 5.2
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 28 6.9
09_02_0081 - 4041364-4041555,4041830-4041911,4042192-4042443,404... 28 9.2
07_01_0461 + 3492302-3492413,3492868-3492964,3493053-3493131,349... 28 9.2
05_01_0556 - 4876849-4877328 28 9.2
01_06_1735 - 39545146-39545451,39545810-39545945,39546072-395462... 28 9.2
01_05_0720 - 24588623-24588658,24588888-24589196,24589449-245913... 28 9.2
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 28 9.2
>02_05_1055 -
33798162-33798290,33798417-33798604,33798707-33798767,
33799045-33799122,33799250-33799472,33799599-33799824,
33799922-33800116,33800210-33800627,33800904-33801182
Length = 598
Score = 89.4 bits (212), Expect = 3e-18
Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Frame = -1
Query: 522 EIEDTDMEGRLMLADALVYG--QAVHKPELVIDVATFTRGVLQALGGAACGCYTESEALW 349
E+ +TD EGRL LADALVY Q V K +ID+AT T + ALG + G +T S+ L
Sbjct: 447 EVNNTDAEGRLTLADALVYACNQGVDK---IIDLATLTGACVVALGPSIAGIFTPSDELA 503
Query: 348 RDVTAAGARSGDRAWRLPLWDYYRRQITDDPSVDLRNKGSGKATSCLGAAFLKSFV--CC 175
++V AA SG++ WR+PL + Y + + D+ N G + S A FLK FV
Sbjct: 504 KEVAAASEISGEKFWRMPLEESYWESMKSGVA-DMVNTGGRQGGSITAALFLKQFVDEKV 562
Query: 174 SWLHVDTTG 148
W+H+D G
Sbjct: 563 QWMHIDMAG 571
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -3
Query: 628 INVCAVIPICENMVSGQCMKVGDVVRALNGLSIQVRD 518
+ V ++ CENM+SG M+ GD+V A NG +I+V +
Sbjct: 414 VEVHFIVAACENMISGTGMRPGDIVTASNGKTIEVNN 450
>12_02_0137 +
14153603-14153629,14154136-14154586,14155066-14155260,
14155366-14155628,14155964-14156104,14156188-14156283,
14156672-14156749,14157134-14157194,14157324-14157511,
14158441-14158569
Length = 542
Score = 85.4 bits (202), Expect = 4e-17
Identities = 52/127 (40%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Frame = -1
Query: 522 EIEDTDMEGRLMLADALVYGQAVHKPELVIDVATFTRGVLQALGGAACGCYTESEALWRD 343
E+++TD EGRL LADALVY + + +ID+AT T ALG + G T S+ L ++
Sbjct: 391 EVDNTDAEGRLTLADALVYACKLGVDK-IIDLATLTGYCRIALGPSIAGILTPSDELDKE 449
Query: 342 VTAAGARSGDRAWRLPLWDYYRRQITDDPSVDLRNKGSGKATSCLGAAFLKSFV--CCSW 169
V AA SG++ WRLPL + Y Q+ + D+ N GS + FLK FV W
Sbjct: 450 VAAAYEASGEKFWRLPLEESYWEQMKSSVA-DMLNTGSPLGGAITAGLFLKQFVDEKVKW 508
Query: 168 LHVDTTG 148
+HVD G
Sbjct: 509 MHVDMAG 515
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3
Query: 628 INVCAVIPICENMVSGQCMKVGDVVRALNGLSIQV 524
+ V + CENM+SG M+ GD+V A NG +I+V
Sbjct: 358 VEVHFISAACENMISGTGMRPGDIVTASNGKTIEV 392
>09_01_0155 -
2301903-2302151,2302334-2302491,2302651-2302819,
2303796-2304839,2305792-2306075,2306318-2307333,
2307937-2308085
Length = 1022
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 128 PCASLPTPVVSTCSHEQHTKLFKNAAPRQEVALP 229
PC+S P +TCS + H L +A PR++ LP
Sbjct: 75 PCSSSSAP--NTCSQQSHLLLVSSAGPREQTLLP 106
>12_02_0193 +
15242068-15242265,15242356-15244589,15244675-15244926,
15245007-15245117,15245207-15245288,15245563-15245754
Length = 1022
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCPLT 590
P R+P R+P PP P + P++A TSPT H P T
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAPPT 628
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>11_06_0069 +
19770182-19770379,19770470-19772703,19772789-19773040,
19773121-19773231,19773321-19773402,19773677-19773868
Length = 1022
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>11_04_0270 -
15590955-15591146,15591421-15591502,15591592-15591702,
15591783-15592034,15592120-15594353,15594444-15594641
Length = 1022
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>09_02_0131 -
4693828-4694019,4694107-4694199,4694294-4694375,
4694465-4694575,4694656-4694907,4694993-4697196
Length = 977
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 500 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 539
>08_02_0194 +
14084828-14085025,14085116-14085788,14085855-14087082,
14087435-14087686,14087767-14087877,14087967-14088048,
14088323-14088514
Length = 911
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 565 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 604
>08_01_0440 +
3875422-3875619,3875710-3876382,3876449-3877943,
3878029-3878280,3878361-3878471,3878561-3878642,
3878917-3879108
Length = 1000
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 565 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 604
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>06_01_1155 +
9777611-9777808,9777899-9780132,9780218-9780469,
9780550-9780660,9780750-9780831,9781106-9781297
Length = 1022
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>05_04_0345 +
20451497-20451740,20452078-20452159,20452837-20452882,
20453669-20454352
Length = 351
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 453 GRPARTPERRPASAGPPCPCLRSRTW 530
G P TP RRP +AG PC + W
Sbjct: 11 GGPCLTPRRRPLAAGEAAPCSVAAAW 36
>05_01_0577 +
5159934-5160131,5160222-5162455,5162541-5162792,
5162873-5162983,5163073-5163154,5163429-5163620
Length = 1022
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>05_01_0571 -
5067558-5067749,5068024-5068105,5068195-5068305,
5068386-5068637,5068723-5070956,5071047-5071244
Length = 1022
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>03_02_0458 +
8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 31.5 bits (68), Expect = 0.74
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 541 GLSIQVRDRRHGHGGPADAGRRSG 470
GL++ + DRRHG G A AG SG
Sbjct: 111 GLALSLEDRRHGGGSGAGAGNSSG 134
>02_01_0374 -
2702804-2702995,2703270-2703351,2703441-2703551,
2703632-2703883,2703969-2704798,2704895-2706202,
2706293-2706490
Length = 990
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 555 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 594
>01_06_0075 -
26201231-26201422,26201697-26201778,26201868-26201978,
26202059-26202310,26202396-26204629,26204720-26204917
Length = 1022
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>01_05_0224 +
19485296-19485493,19485584-19487817,19487903-19488154,
19488235-19488345,19488435-19488516,19488791-19488982
Length = 1022
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSPT H P
Sbjct: 587 PLRSPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 626
>07_01_0203 + 1469575-1470045
Length = 156
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 396 LGGAACGCYTESEALWRDVTAAG 328
+GGA CG YT + +WRD TA G
Sbjct: 106 VGGAMCGHYT--QVVWRDTTAVG 126
>07_01_0199 - 1420982-1421452
Length = 156
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 396 LGGAACGCYTESEALWRDVTAAG 328
+GGA CG YT + +WRD TA G
Sbjct: 106 VGGAMCGHYT--QVVWRDTTAVG 126
>07_01_0195 - 1387831-1388301
Length = 156
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 396 LGGAACGCYTESEALWRDVTAAG 328
+GGA CG YT + +WRD TA G
Sbjct: 106 VGGAMCGHYT--QVVWRDTTAVG 126
>07_01_0191 - 1354678-1355148
Length = 156
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 396 LGGAACGCYTESEALWRDVTAAG 328
+GGA CG YT + +WRD TA G
Sbjct: 106 VGGAMCGHYT--QVVWRDTTAVG 126
>07_01_0187 - 1321525-1321995
Length = 156
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 396 LGGAACGCYTESEALWRDVTAAG 328
+GGA CG YT + +WRD TA G
Sbjct: 106 VGGAMCGHYT--QVVWRDTTAVG 126
>09_02_0601 +
11112201-11112386,11112471-11114080,11114345-11114579,
11115233-11115358
Length = 718
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSP H P
Sbjct: 430 PLRSPPRQPTP--PPSPSQQPPLLAPQPVQASPTSPAKQHAP 469
>08_02_0405 +
16790720-16791691,16792064-16792135,16794487-16794621,
16794630-16794758
Length = 435
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 354 LWRDVTAAGARSGDRAWRLPLWDYYR 277
L+R V A A SGD+ WR+ W Y+
Sbjct: 198 LFRTVRVAFAASGDKQWRVSSWSMYQ 223
>04_01_0365 -
4796780-4796971,4797246-4797327,4797417-4797527,
4797608-4797859,4797945-4800115
Length = 935
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + + P++A TSP H P
Sbjct: 500 PLRSPPRQPTP--PPSPSQQPPLPVPQPVQASPTSPAKQHAP 539
>08_02_0307 - 15612761-15612856,15613879-15613950,15614325-15615290
Length = 377
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 354 LWRDVTAAGARSGDRAWRLPLWDYYR 277
L R V A A SGDR WR+ W Y+
Sbjct: 196 LSRTVRVAFAASGDRQWRVSSWSMYQ 221
>11_06_0181 + 20985960-20987825,20987904-20989169
Length = 1043
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +2
Query: 341 TSRHSASLSV*QPHAAPPSACSTPLVKVATSMTSSG----LWTACPY 469
T R AS V + PP+ + + VA SMT S WT CP+
Sbjct: 128 TKRQCASREVAKEATQPPNKTDSNISNVAGSMTPSASVLVFWTICPH 174
>10_07_0154 +
13487971-13488168,13488259-13488483,13488592-13490492,
13490578-13490829,13491110-13491191,13491466-13491657
Length = 949
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSP H P
Sbjct: 551 PLRSPPRQPTP--PPSPSQQPPLPAPQPVQASPTSPAKQHAP 590
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSP H P
Sbjct: 495 PLRSPPRQPTP--PPSPSQQPPLPAPQPVQASPTSPAKQHAP 534
>09_02_0349 -
7632140-7632234,7632348-7632449,7632864-7632962,
7633517-7633622,7633897-7633978,7634068-7634178,
7634259-7634510,7634596-7635688,7636157-7636829,
7636920-7637117
Length = 936
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSP H P
Sbjct: 431 PLRSPPRQPTP--PPSPSQQPPLPAPQPVQASPTSPAKQHAP 470
>06_01_1113 -
9164953-9165044,9166453-9166586,9166624-9166734,
9166815-9167066,9167152-9168186,9168313-9169187,
9169476-9169673
Length = 898
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 465 RTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
R+P R+P PP P L+ P++A TSP H P
Sbjct: 481 RSPPRQPTP--PPSPSLQPAFPAPQPVQASPTSPAKQHAP 518
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSP H P
Sbjct: 500 PLRSPPRQPTP--PPSPSQQPPLPAPQPVQASPTSPAKQHAP 539
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 459 PARTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
P R+P R+P PP P + P++A TSP H P
Sbjct: 541 PLRSPPRQPTP--PPSPSQQPPLPAPQPVQASPTSPAKKHAP 580
>11_01_0397 + 3006815-3007438
Length = 207
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -3
Query: 592 MVSGQC-MKVGDVVRALNGLSIQVRD--RRHGHGGPADAG 482
+V+G C M +G+ V L +++ D RR GGPA AG
Sbjct: 75 LVAGACSMAIGEYVSVHVQLDVELADLERRRRRGGPAPAG 114
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 317 PERAPAAVTSRHSASLSV*QPHAAPPSACSTPLVKVATSMTSSGLWTACP 466
PER +A SR +L V PSA S P+ KV+ S ++ P
Sbjct: 347 PERPLSAGRSRPGMALGVRSTSNTEPSAASAPVKKVSVPAMSRSKFSDAP 396
>09_02_0081 -
4041364-4041555,4041830-4041911,4042192-4042443,
4042529-4044001,4044222-4044733,4044824-4045021
Length = 902
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 465 RTPERRPASAGPPCPCLRSRTWMESPLRALTTSPTFMHCP 584
R P R+P PP P + P++A TSPT H P
Sbjct: 506 RHPPRQPTP--PPSPSQQPPLPTPQPVQASPTSPTKQHAP 543
>07_01_0461 +
3492302-3492413,3492868-3492964,3493053-3493131,
3493484-3493794,3494219-3494231
Length = 203
Score = 27.9 bits (59), Expect = 9.2
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +2
Query: 317 PERAPAAVTSRHSASLSV*QPHAAPPSACSTPLVKVATSMTSSGLWTACPYT 472
P APAAV S +V P AAPPSA P+ S S + P T
Sbjct: 130 PAPAPAAVPPSASVPSTVVPPVAAPPSAL-LPMSAAGASAMSPMQFAGTPGT 180
>05_01_0556 - 4876849-4877328
Length = 159
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 83 GRPVMRRADR*GGAEPCASLPTPVV 157
G PV ++A G PC SL TP +
Sbjct: 41 GNPVSKQAAEHSGQRPCRSLQTPAI 65
>01_06_1735 -
39545146-39545451,39545810-39545945,39546072-39546214,
39546700-39546828,39547198-39547446,39548032-39548403
Length = 444
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 567 SETSSELSTDSPSRSEIE-DTDMEGRLMLADALVYGQAVHKPEL 439
SETSS + D PS+ E++ D D +++ G H EL
Sbjct: 280 SETSSRVEVDDPSQLEVDRDEDYRSEADVSNGTFIGYKPHIEEL 323
>01_05_0720 -
24588623-24588658,24588888-24589196,24589449-24591366,
24591412-24591693,24592027-24592328
Length = 948
Score = 27.9 bits (59), Expect = 9.2
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +3
Query: 456 RPARTPERRPASAG---PPCPCLRSRTWMESPLRALTTSPTFMHCPLT-MFSHIGM 611
RPA P +RP +AG PP P R W+ L P M LT F +G+
Sbjct: 271 RPA--PLQRPTAAGEASPPPPSFAQRAWLVLANTMLVVCPPLMVAFLTATFGFLGL 324
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 614 SHTDMREHGERTVHEGRRRRQSSQRTLHP 528
S D REHGE H +R S++R HP
Sbjct: 687 SLADYREHGENLFHRKLKRGISTKRGDHP 715
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,375,516
Number of Sequences: 37544
Number of extensions: 286898
Number of successful extensions: 1324
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -