Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15d03
(879 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111018-1|AAI11019.1| 658|Homo sapiens translin-associated fac... 75 5e-13
BC050693-1|AAH50693.1| 366|Homo sapiens TSNAXIP1 protein protein. 75 5e-13
AF132730-1|AAF66441.1| 366|Homo sapiens unknown protein. 75 5e-13
Y15065-1|CAA75348.1| 844|Homo sapiens voltage gated potassium c... 39 0.027
AL353658-7|CAH72960.1| 868|Homo sapiens KCNQ2 protein. 39 0.027
AL353658-6|CAH72959.1| 854|Homo sapiens KCNQ2 protein. 39 0.027
AL353658-5|CAH72961.1| 842|Homo sapiens KCNQ2 protein. 39 0.027
AL353658-4|CAH72962.1| 880|Homo sapiens KCNQ2 protein. 39 0.027
AL353658-3|CAH72958.1| 872|Homo sapiens KCNQ2 protein. 39 0.027
AL121829-7|CAI95745.1| 868|Homo sapiens KCNQ2 protein. 39 0.027
AL121829-6|CAI95744.1| 854|Homo sapiens KCNQ2 protein. 39 0.027
AL121829-5|CAI95741.1| 842|Homo sapiens KCNQ2 protein. 39 0.027
AL121829-4|CAI95742.1| 880|Homo sapiens KCNQ2 protein. 39 0.027
AL121829-3|CAI95740.1| 872|Homo sapiens KCNQ2 protein. 39 0.027
AF074247-1|AAC25921.1| 854|Homo sapiens neuronal delayed-rectif... 39 0.027
AF033348-1|AAB97315.1| 872|Homo sapiens potassium channel protein. 39 0.027
AF110020-1|AAD16988.1| 841|Homo sapiens potassium channel protein. 36 0.26
BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (S... 35 0.34
AY007138-1|AAG01999.1| 393|Homo sapiens protein ( Homo sapiens ... 35 0.34
AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein. 35 0.34
AF513324-1|AAP47165.1| 348|Homo sapiens alpha-1,4-galactosyltra... 31 5.5
AK125347-1|BAC86140.1| 277|Homo sapiens protein ( Homo sapiens ... 31 7.3
BC033450-1|AAH33450.1| 523|Homo sapiens TMEM181 protein protein. 30 9.6
BC028195-1|AAH28195.1| 182|Homo sapiens chromosome 12 open read... 30 9.6
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 30 9.6
>BC111018-1|AAI11019.1| 658|Homo sapiens translin-associated factor X
interacting protein 1 protein.
Length = 658
Score = 74.5 bits (175), Expect = 5e-13
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 8/239 (3%)
Frame = -1
Query: 846 DYVTKYFEDRYQQASVRAEWAYNLCAGAEQLLDDPQVRLFWGTAHAQLSEHVYWGLR-TH 670
D+ + E R+ + A WAY + + + + F+ + SE+VY + T
Sbjct: 419 DFFFNFLEHRFGPSDAMA-WAYTIFENIKIFHSNEVMSQFYAVLMGKRSENVYVTQKETV 477
Query: 669 WRALRDQLYRHADGRETISIEEFEKVAKATFPLKSEVDIKNLVDVVRKQLKLKINNQLIC 490
+ L++ + +++E+F V K+TFPLK+E I+ L++ N L+
Sbjct: 478 AQLLKEMTNADSQNEGLLTMEQFNTVLKSTFPLKTEEQIQELMEAGGWH-PSSSNADLLN 536
Query: 489 LDKLFYENEEGFERIELAKELYRQRRLAQDRYIRELVATLGGKQAANKPVTVDALKRAFA 310
LF E+EEG + ++L+ Q +D Y+++L LG + ++ VT+ L+
Sbjct: 537 YRSLFMEDEEG-QSEPFVQKLWEQYMDEKDEYLQQLKQELGIE--LHEEVTLPKLRGGLM 593
Query: 309 LLDPAIDHIRMERYIRWAFSDNTSDL-------NNICAIPLRTLTGRLAAGDIERVGPR 154
+DP++D + Y+ AF S++ L+T RL DI RVGPR
Sbjct: 594 TIDPSLDKQTVNTYMSQAFQLPESEMPEEGDEKEEAVVEILQTALERLQVIDIRRVGPR 652
>BC050693-1|AAH50693.1| 366|Homo sapiens TSNAXIP1 protein protein.
Length = 366
Score = 74.5 bits (175), Expect = 5e-13
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 8/239 (3%)
Frame = -1
Query: 846 DYVTKYFEDRYQQASVRAEWAYNLCAGAEQLLDDPQVRLFWGTAHAQLSEHVYWGLR-TH 670
D+ + E R+ + A WAY + + + + F+ + SE+VY + T
Sbjct: 127 DFFFNFLEHRFGPSDAMA-WAYTIFENIKIFHSNEVMSQFYAVLMGKRSENVYVTQKETV 185
Query: 669 WRALRDQLYRHADGRETISIEEFEKVAKATFPLKSEVDIKNLVDVVRKQLKLKINNQLIC 490
+ L++ + +++E+F V K+TFPLK+E I+ L++ N L+
Sbjct: 186 AQLLKEMTNADSQNEGLLTMEQFNTVLKSTFPLKTEEQIQELMEAGGWH-PSSSNADLLN 244
Query: 489 LDKLFYENEEGFERIELAKELYRQRRLAQDRYIRELVATLGGKQAANKPVTVDALKRAFA 310
LF E+EEG + ++L+ Q +D Y+++L LG + ++ VT+ L+
Sbjct: 245 YRSLFMEDEEG-QSEPFVQKLWEQYMDEKDEYLQQLKQELGIE--LHEEVTLPKLRGGLM 301
Query: 309 LLDPAIDHIRMERYIRWAFSDNTSDL-------NNICAIPLRTLTGRLAAGDIERVGPR 154
+DP++D + Y+ AF S++ L+T RL DI RVGPR
Sbjct: 302 TIDPSLDKQTVNTYMSQAFQLPESEMPEEGDEKEEAVVEILQTALERLQVIDIRRVGPR 360
>AF132730-1|AAF66441.1| 366|Homo sapiens unknown protein.
Length = 366
Score = 74.5 bits (175), Expect = 5e-13
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 8/239 (3%)
Frame = -1
Query: 846 DYVTKYFEDRYQQASVRAEWAYNLCAGAEQLLDDPQVRLFWGTAHAQLSEHVYWGLR-TH 670
D+ + E R+ + A WAY + + + + F+ + SE+VY + T
Sbjct: 127 DFFFNFLEHRFGPSDAMA-WAYTIFENIKIFHSNEVMSQFYAVLMGKRSENVYVTQKETV 185
Query: 669 WRALRDQLYRHADGRETISIEEFEKVAKATFPLKSEVDIKNLVDVVRKQLKLKINNQLIC 490
+ L++ + +++E+F V K+TFPLK+E I+ L++ N L+
Sbjct: 186 AQLLKEMTNADSQNEGLLTMEQFNTVLKSTFPLKTEEQIQELMEAGGWH-PSSSNADLLN 244
Query: 489 LDKLFYENEEGFERIELAKELYRQRRLAQDRYIRELVATLGGKQAANKPVTVDALKRAFA 310
LF E+EEG + ++L+ Q +D Y+++L LG + ++ VT+ L+
Sbjct: 245 YRSLFMEDEEG-QSEPFVQKLWEQYMDEKDEYLQQLKQELGIE--LHEEVTLPKLRGGLM 301
Query: 309 LLDPAIDHIRMERYIRWAFSDNTSDL-------NNICAIPLRTLTGRLAAGDIERVGPR 154
+DP++D + Y+ AF S++ L+T RL DI RVGPR
Sbjct: 302 TIDPSLDKQTVNTYMSQAFQLPESEMPEEGDEKEEAVVEILQTALERLQVIDIRRVGPR 360
>Y15065-1|CAA75348.1| 844|Homo sapiens voltage gated potassium
channel protein.
Length = 844
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 769 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 825
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 826 RSATGEGPFGDVGWAGPR 843
>AL353658-7|CAH72960.1| 868|Homo sapiens KCNQ2 protein.
Length = 868
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 793 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 849
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 850 RSATGEGPFGDVGWAGPR 867
>AL353658-6|CAH72959.1| 854|Homo sapiens KCNQ2 protein.
Length = 854
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 779 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 835
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 836 RSATGEGPFGDVGWAGPR 853
>AL353658-5|CAH72961.1| 842|Homo sapiens KCNQ2 protein.
Length = 842
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 767 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 823
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 824 RSATGEGPFGDVGWAGPR 841
>AL353658-4|CAH72962.1| 880|Homo sapiens KCNQ2 protein.
Length = 880
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 805 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 861
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 862 RSATGEGPFGDVGWAGPR 879
>AL353658-3|CAH72958.1| 872|Homo sapiens KCNQ2 protein.
Length = 872
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 797 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 853
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 854 RSATGEGPFGDVGWAGPR 871
>AL121829-7|CAI95745.1| 868|Homo sapiens KCNQ2 protein.
Length = 868
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 793 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 849
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 850 RSATGEGPFGDVGWAGPR 867
>AL121829-6|CAI95744.1| 854|Homo sapiens KCNQ2 protein.
Length = 854
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 779 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 835
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 836 RSATGEGPFGDVGWAGPR 853
>AL121829-5|CAI95741.1| 842|Homo sapiens KCNQ2 protein.
Length = 842
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 767 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 823
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 824 RSATGEGPFGDVGWAGPR 841
>AL121829-4|CAI95742.1| 880|Homo sapiens KCNQ2 protein.
Length = 880
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 805 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 861
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 862 RSATGEGPFGDVGWAGPR 879
>AL121829-3|CAI95740.1| 872|Homo sapiens KCNQ2 protein.
Length = 872
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 797 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 853
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 854 RSATGEGPFGDVGWAGPR 871
>AF074247-1|AAC25921.1| 854|Homo sapiens neuronal delayed-rectifier
voltage-gated potassium channel splice variant protein.
Length = 854
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 779 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 835
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 836 RSATGEGPFGDVGWAGPR 853
>AF033348-1|AAB97315.1| 872|Homo sapiens potassium channel protein.
Length = 872
Score = 38.7 bits (86), Expect = 0.027
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 797 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 853
Query: 207 RTLTGRLAAGDIERVGPR 154
R+ TG GD+ GPR
Sbjct: 854 RSATGEGPFGDVGWAGPR 871
>AF110020-1|AAD16988.1| 841|Homo sapiens potassium channel protein.
Length = 841
Score = 35.5 bits (78), Expect = 0.26
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = -1
Query: 387 ELVATLGGKQAANKPVTVDALKRAFALLDPAIDHIRMERYIRWAFSDNTSDLNNICAIPL 208
EL + G + +DAL +A + P ++ YI SD SDL C P
Sbjct: 766 ELERSFSGFSISQSKENLDALNSCYAAVAPCA---KVRPYIAEGESDTDSDLCTPCGPPP 822
Query: 207 RTLTGRLAAGDIERVGPR 154
+ TG GD+ GPR
Sbjct: 823 CSATGEGPFGDVGWAGPR 840
>BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 556
Score = 35.1 bits (77), Expect = 0.34
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 497 SWLLIFSLSCFL---TTSTKFLISTSLFNGNVAFATFSNSSMEM-VSRPSACRYSWSRSA 664
S+LLI ++ +L TK LI + NG VA +TFS+ S ++ S Y W ++
Sbjct: 354 SFLLINGIAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGEVYVWDVNS 413
Query: 665 RQCVRR 682
R+C+ R
Sbjct: 414 RKCLNR 419
>AY007138-1|AAG01999.1| 393|Homo sapiens protein ( Homo sapiens
clone CDABP0061 mRNA sequence. ).
Length = 393
Score = 35.1 bits (77), Expect = 0.34
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 497 SWLLIFSLSCFL---TTSTKFLISTSLFNGNVAFATFSNSSMEM-VSRPSACRYSWSRSA 664
S+LLI ++ +L TK LI + NG VA +TFS+ S ++ S Y W ++
Sbjct: 191 SFLLINGIAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGEVYVWDVNS 250
Query: 665 RQCVRR 682
R+C+ R
Sbjct: 251 RKCLNR 256
>AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein.
Length = 521
Score = 35.1 bits (77), Expect = 0.34
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 497 SWLLIFSLSCFL---TTSTKFLISTSLFNGNVAFATFSNSSMEM-VSRPSACRYSWSRSA 664
S+LLI ++ +L TK LI + NG VA +TFS+ S ++ S Y W ++
Sbjct: 330 SFLLINGIAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGEVYVWDVNS 389
Query: 665 RQCVRR 682
R+C+ R
Sbjct: 390 RKCLNR 395
>AF513324-1|AAP47165.1| 348|Homo sapiens
alpha-1,4-galactosyltransferase protein.
Length = 348
Score = 31.1 bits (67), Expect = 5.5
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -2
Query: 860 PCPCRITSPSILKIGTSRLR-SEPNGRTTCALAP--SSC*TTRRCDCSGAPRMRSSASTC 690
PCP R ++PS + G S LR S P C++ P S+C T R PR +C
Sbjct: 278 PCPLRPSTPSPGRTGRSTLRTSTPRSCRGCSVPPMLSTCGTRRARARGSRPRPGHCWPSC 337
Query: 689 TGA 681
A
Sbjct: 338 MPA 340
>AK125347-1|BAC86140.1| 277|Homo sapiens protein ( Homo sapiens
cDNA FLJ43357 fis, clone NT2RP7013795, weakly similar
to VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 277
Score = 30.7 bits (66), Expect = 7.3
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = -2
Query: 785 RTTCALAPS-SC*TTRRCD-CSGAPRMRSSASTCTGACGRTGARCGTSCTDTLTAGRPFP 612
R LAP S + C CSGA S+AS CT C T R C AG P
Sbjct: 117 RAAGTLAPGPSTRSLESCGGCSGATHSSSTASRCTARCS-TPPRTTAPCASGTCAGSEVP 175
>BC033450-1|AAH33450.1| 523|Homo sapiens TMEM181 protein protein.
Length = 523
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 722 APRMRSSASTCTGACG-RTGARCGTSCTDTLTA 627
+PR +S+STC G CG RT + TS +TA
Sbjct: 51 SPRSAASSSTCAGGCGKRTASSRRTSRPSRMTA 83
>BC028195-1|AAH28195.1| 182|Homo sapiens chromosome 12 open reading
frame 33 protein.
Length = 182
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 382 SRHLGRETSRQQACHCGRTEKGLRIARPS 296
SRH GRE + HCG ARPS
Sbjct: 149 SRHRGREAQMSHSSHCGSRSCSAAAARPS 177
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 743 RRCDCSGAPRMRSSASTCTGACGRTGARCGTSC 645
+RCDC G C GR+GA C C
Sbjct: 1507 QRCDCDGGAPCDPVTGLCLCPPGRSGATCNLDC 1539
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,725,306
Number of Sequences: 237096
Number of extensions: 2881116
Number of successful extensions: 8652
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8639
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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