Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15c17
(496 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC057233-1|AAH57233.1| 162|Homo sapiens keratinocyte associated... 132 5e-31
BC048205-1|AAH48205.1| 146|Homo sapiens KRTCAP2 protein protein. 132 5e-31
BC029806-1|AAH29806.1| 162|Homo sapiens keratinocyte associated... 132 5e-31
AL607067-2|CAH71196.1| 162|Homo sapiens keratinocyte associated... 132 5e-31
AY157577-1|AAO13161.2| 114|Homo sapiens keratinocytes associate... 103 3e-22
U66088-1|AAB17378.1| 643|Homo sapiens sodium iodide symporter p... 39 0.008
D87920-1|BAA24835.1| 643|Homo sapiens sodium iodide symporter p... 39 0.008
BC105049-1|AAI05050.1| 643|Homo sapiens solute carrier family 5... 39 0.008
BC105047-1|AAI05048.1| 643|Homo sapiens solute carrier family 5... 39 0.008
AC005796-2|AAC62827.1| 643|Homo sapiens sodium iodide symporter... 39 0.008
>BC057233-1|AAH57233.1| 162|Homo sapiens keratinocyte associated
protein 2 protein.
Length = 162
Score = 132 bits (320), Expect = 5e-31
Identities = 64/136 (47%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Frame = -3
Query: 404 GKMAVNSATSFVLSSILTLLIFSGMQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNL 225
G M V + TS LSS+L+LL+F+GMQMY QL + I GG LGS +F+F +TA NL
Sbjct: 25 GMMVVGTVTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL 84
Query: 224 ETILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAV 48
E ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC IF ++ +YY+NK+S Y
Sbjct: 85 ENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQA 144
Query: 47 VAP--QPAAVKSRRHK 6
AP PA V + K
Sbjct: 145 AAPVLTPAKVTGKSKK 160
>BC048205-1|AAH48205.1| 146|Homo sapiens KRTCAP2 protein protein.
Length = 146
Score = 132 bits (320), Expect = 5e-31
Identities = 64/136 (47%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Frame = -3
Query: 404 GKMAVNSATSFVLSSILTLLIFSGMQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNL 225
G M V + TS LSS+L+LL+F+GMQMY QL + I GG LGS +F+F +TA NL
Sbjct: 9 GMMVVGTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL 68
Query: 224 ETILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAV 48
E ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC IF ++ +YY+NK+S Y
Sbjct: 69 ENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQA 128
Query: 47 VAP--QPAAVKSRRHK 6
AP PA V + K
Sbjct: 129 AAPVLTPAKVTGKSKK 144
>BC029806-1|AAH29806.1| 162|Homo sapiens keratinocyte associated
protein 2 protein.
Length = 162
Score = 132 bits (320), Expect = 5e-31
Identities = 64/136 (47%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Frame = -3
Query: 404 GKMAVNSATSFVLSSILTLLIFSGMQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNL 225
G M V + TS LSS+L+LL+F+GMQMY QL + I GG LGS +F+F +TA NL
Sbjct: 25 GMMVVGTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL 84
Query: 224 ETILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAV 48
E ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC IF ++ +YY+NK+S Y
Sbjct: 85 ENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQA 144
Query: 47 VAP--QPAAVKSRRHK 6
AP PA V + K
Sbjct: 145 AAPVLTPAKVTGKSKK 160
>AL607067-2|CAH71196.1| 162|Homo sapiens keratinocyte associated
protein 2 protein.
Length = 162
Score = 132 bits (320), Expect = 5e-31
Identities = 64/136 (47%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Frame = -3
Query: 404 GKMAVNSATSFVLSSILTLLIFSGMQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNL 225
G M V + TS LSS+L+LL+F+GMQMY QL + I GG LGS +F+F +TA NL
Sbjct: 25 GMMVVGTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL 84
Query: 224 ETILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAV 48
E ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC IF ++ +YY+NK+S Y
Sbjct: 85 ENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQA 144
Query: 47 VAP--QPAAVKSRRHK 6
AP PA V + K
Sbjct: 145 AAPVLTPAKVTGKSKK 160
>AY157577-1|AAO13161.2| 114|Homo sapiens keratinocytes associated
protein 2 protein.
Length = 114
Score = 103 bits (248), Expect = 3e-22
Identities = 50/112 (44%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Frame = -3
Query: 332 MQMYKPQLILSPMTIIFGGYLGSLMFMFFVTAVGNLETILFGKAFQLKL-PEVVLSMGIS 156
MQMY QL + I GG LGS +F+F +TA NLE ++FGK FQ K+ PE++L + ++
Sbjct: 1 MQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLA 60
Query: 155 LIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAVVAP--QPAAVKSRRHK 6
L A+ ++HR+C TTC IF ++ +YY+NK+S Y AP PA V + K
Sbjct: 61 LFASSLIHRVCVTTCFIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKK 112
>U66088-1|AAB17378.1| 643|Homo sapiens sodium iodide symporter
protein.
Length = 643
Score = 39.1 bits (87), Expect = 0.008
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Frame = -3
Query: 437 TSWHKLLQIKYGKMAVNSATSFVLSSILTLLIFSGMQMYKPQLILSPMT--IIFGGYLGS 264
TS ++ L++++ + T L I+ ++++G+ +Y P LIL+ +T I+ L +
Sbjct: 115 TSTYEYLEMRFSRAVRLCGT---LQYIVATMLYTGIVIYAPALILNQVTGLDIWASLLST 171
Query: 263 LMFMFFVTAVGNLETILFGKAFQLKLP----EVVLSMGISLI 150
+ F TAVG ++ +++ FQ+ + VVL+ G+ L+
Sbjct: 172 GIICTFYTAVGGMKAVVWTDVFQVVVMLSGFWVVLARGVMLV 213
>D87920-1|BAA24835.1| 643|Homo sapiens sodium iodide symporter
protein.
Length = 643
Score = 39.1 bits (87), Expect = 0.008
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Frame = -3
Query: 437 TSWHKLLQIKYGKMAVNSATSFVLSSILTLLIFSGMQMYKPQLILSPMT--IIFGGYLGS 264
TS ++ L++++ + T L I+ ++++G+ +Y P LIL+ +T I+ L +
Sbjct: 115 TSTYEYLEMRFSRAVRLCGT---LQYIVATMLYTGIVIYAPALILNQVTGLDIWASLLST 171
Query: 263 LMFMFFVTAVGNLETILFGKAFQLKLP----EVVLSMGISLI 150
+ F TAVG ++ +++ FQ+ + VVL+ G+ L+
Sbjct: 172 GIICTFYTAVGGMKAVVWTDVFQVVVMLSGFWVVLARGVMLV 213
>BC105049-1|AAI05050.1| 643|Homo sapiens solute carrier family 5
(sodium iodide symporter), member 5 protein.
Length = 643
Score = 39.1 bits (87), Expect = 0.008
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Frame = -3
Query: 437 TSWHKLLQIKYGKMAVNSATSFVLSSILTLLIFSGMQMYKPQLILSPMT--IIFGGYLGS 264
TS ++ L++++ + T L I+ ++++G+ +Y P LIL+ +T I+ L +
Sbjct: 115 TSTYEYLEMRFSRAVRLCGT---LQYIVATMLYTGIVIYAPALILNQVTGLDIWASLLST 171
Query: 263 LMFMFFVTAVGNLETILFGKAFQLKLP----EVVLSMGISLI 150
+ F TAVG ++ +++ FQ+ + VVL+ G+ L+
Sbjct: 172 GIICTFYTAVGGMKAVVWTDVFQVVVMLSGFWVVLARGVMLV 213
>BC105047-1|AAI05048.1| 643|Homo sapiens solute carrier family 5
(sodium iodide symporter), member 5 protein.
Length = 643
Score = 39.1 bits (87), Expect = 0.008
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Frame = -3
Query: 437 TSWHKLLQIKYGKMAVNSATSFVLSSILTLLIFSGMQMYKPQLILSPMT--IIFGGYLGS 264
TS ++ L++++ + T L I+ ++++G+ +Y P LIL+ +T I+ L +
Sbjct: 115 TSTYEYLEMRFSRAVRLCGT---LQYIVATMLYTGIVIYAPALILNQVTGLDIWASLLST 171
Query: 263 LMFMFFVTAVGNLETILFGKAFQLKLP----EVVLSMGISLI 150
+ F TAVG ++ +++ FQ+ + VVL+ G+ L+
Sbjct: 172 GIICTFYTAVGGMKAVVWTDVFQVVVMLSGFWVVLARGVMLV 213
>AC005796-2|AAC62827.1| 643|Homo sapiens sodium iodide symporter
protein.
Length = 643
Score = 39.1 bits (87), Expect = 0.008
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Frame = -3
Query: 437 TSWHKLLQIKYGKMAVNSATSFVLSSILTLLIFSGMQMYKPQLILSPMT--IIFGGYLGS 264
TS ++ L++++ + T L I+ ++++G+ +Y P LIL+ +T I+ L +
Sbjct: 115 TSTYEYLEMRFSRAVRLCGT---LQYIVATMLYTGIVIYAPALILNQVTGLDIWASLLST 171
Query: 263 LMFMFFVTAVGNLETILFGKAFQLKLP----EVVLSMGISLI 150
+ F TAVG ++ +++ FQ+ + VVL+ G+ L+
Sbjct: 172 GIICTFYTAVGGMKAVVWTDVFQVVVMLSGFWVVLARGVMLV 213
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,924,423
Number of Sequences: 237096
Number of extensions: 1514706
Number of successful extensions: 2460
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2449
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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