Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15c05
(868 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 94 2e-21
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 92 5e-21
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 74 1e-15
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 66 4e-13
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 61 1e-11
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 54 2e-09
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 54 2e-09
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.6
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 4.8
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 93.9 bits (223), Expect = 2e-21
Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Frame = -3
Query: 815 AIKIISKFQAPGDYLKKFLPREIEVVKGLKHENLIRFLQAIETTHRVYIVMEYAENGSLL 636
A+K + K Q ++ + E ++ + +++ + + +Y++ME G L
Sbjct: 395 ALKQMKKAQIVETRQQQHIMSEKRIMGEADCDFVVKLFKTFKDRKYLYMLMEACLGGELW 454
Query: 635 DIIRKDQHIDETRGRRWFKQLVEAVDYCHERGVVHRDIKCENLLMDHGLNIKLSDFGFAR 456
++R H D+ R + +VEA DY H R +++RD+K ENLL+D +KL DFGFA+
Sbjct: 455 TVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAK 514
Query: 455 GHMKPKNGVFALSETFCGSYAYASPEILKGVPYRPQDSDVWSMGVVLYAIVYGRLPFDD- 279
+ +G + TFCG+ Y +PE++ + +D WS+GV+++ ++ G PF
Sbjct: 515 ---RLDHG--RKTWTFCGTPEYVAPEVILNKGH-DISADYWSLGVLMFELLTGTPPFTGG 568
Query: 278 ---TNYTQLLKQVQNKVSFPR 225
Y +LK + + + FPR
Sbjct: 569 DPMKTYNIILKGI-DAIEFPR 588
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 92.3 bits (219), Expect = 5e-21
Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 8/161 (4%)
Frame = -3
Query: 581 KQLVEAVDYCHERGVVHRDIKCENLLM---DHGLNIKLSDFGFARGHMKPKNGVFALSET 411
+Q++E+V +CH GVVHRD+K ENLL+ G +KL+DFG A F
Sbjct: 16 QQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFG---- 71
Query: 410 FCGSYAYASPEILKGVPYRPQDSDVWSMGVVLYAIVYGRLPFDDTNYTQLLKQVQN---K 240
F G+ Y SPE+LK PY + D+W+ GV+LY ++ G PF D + +L Q++
Sbjct: 72 FAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYD 130
Query: 239 VSFPREPKVSAECRKLITRILA--PLKMRVKIPQILADPWL 123
P V+ E + LI ++L P K R+ + L PW+
Sbjct: 131 YPSPEWDTVTPEAKNLINQMLTVNPSK-RITASEALKHPWI 170
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 74.1 bits (174), Expect = 1e-15
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 3/212 (1%)
Frame = -3
Query: 854 VKVASSDRHNCQVAIKIISKFQAPGDYLKKFLPREIEVVKGLKHENLIRFLQAIET-THR 678
+K+ R VAIK + A D + E ++ +H N+I FLQ + T ++
Sbjct: 652 LKLPPDGRTEIDVAIKTLKPGSA--DKARNDFLTEASIMGQFEHPNVI-FLQGVVTKSNP 708
Query: 677 VYIVMEYAENGSLLDIIR-KDQHIDETRGRRWFKQLVEAVDYCHERGVVHRDIKCENLLM 501
V I+ E+ ENGSL +R D + + + + Y E VHRD+ N+L+
Sbjct: 709 VMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLV 768
Query: 500 DHGLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYASPEILKGVPYRPQDSDVWSMGV 321
+ L K++DFG +R G + + +PE + + SDVWSMG+
Sbjct: 769 NAALVCKIADFGLSREIESATEGAYTTRGGKI-PVRWTAPEAIAFRKF-TSASDVWSMGI 826
Query: 320 VLYAIV-YGRLPFDDTNYTQLLKQVQNKVSFP 228
V + ++ YG P+ + + ++K ++ P
Sbjct: 827 VCWEVMSYGERPYWNWSNQDVIKSIEKGYRLP 858
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 66.1 bits (154), Expect = 4e-13
Identities = 42/149 (28%), Positives = 74/149 (49%)
Frame = -3
Query: 731 LKHENLIRFLQAIETTHRVYIVMEYAENGSLLDIIRKDQHIDETRGRRWFKQLVEAVDYC 552
LKH N+++ L + I ME G+ L + + + K + A+ +C
Sbjct: 114 LKHSNIVKVLMIEQGASLSLITMELC--GTTLQNRLDEAILIKNERICILKSITCALQFC 171
Query: 551 HERGVVHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYASPEIL 372
H G+VH D+K +N+LM KL+DFG + P + F G+ Y +PE++
Sbjct: 172 HNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNE-----IDKFYGTPGYTAPEVI 226
Query: 371 KGVPYRPQDSDVWSMGVVLYAIVYGRLPF 285
K P +D++S+G+V + +++ +LPF
Sbjct: 227 KQNRPTPA-ADIYSLGIVAWQMLFRKLPF 254
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 61.3 bits (142), Expect = 1e-11
Identities = 31/106 (29%), Positives = 57/106 (53%)
Frame = -3
Query: 716 LIRFLQAIETTHRVYIVMEYAENGSLLDIIRKDQHIDETRGRRWFKQLVEAVDYCHERGV 537
L++ +T R+Y VMEY G L+ I++ E + ++ + + H RG+
Sbjct: 47 LVQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGI 106
Query: 536 VHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGS 399
V+RD+K +N+L+D +IK++DFG + + ++TFCG+
Sbjct: 107 VYRDLKLDNVLLDQDGHIKIADFGMCKEGISGDK----TTKTFCGT 148
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 54.0 bits (124), Expect = 2e-09
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Frame = -3
Query: 635 DIIRKDQHIDETRGRRWFKQL------VEAVDYCHERGVVHRDIKCENLLMDHGLNIKLS 474
D + +D + G W +++ +E + Y H +G+VHRD+K +N+L+D KL+
Sbjct: 680 DRLSRDLYCGIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLT 739
Query: 473 DFGFARGHMKPKNGVFALSETFCGSYAYASPEILKGVPYRPQDSDVWSMGVVLYAIVYG- 297
DFGF + + + G+ + +PE+L G + DV++ G++ + + G
Sbjct: 740 DFGFCITEV-------MMLGSIVGTPVHMAPELLSG--HYDSSVDVYAFGILFWYLCAGH 790
Query: 296 -RLPF 285
RLP+
Sbjct: 791 VRLPY 795
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 54.0 bits (124), Expect = 2e-09
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Frame = -3
Query: 635 DIIRKDQHIDETRGRRWFKQL------VEAVDYCHERGVVHRDIKCENLLMDHGLNIKLS 474
D + +D + G W +++ +E + Y H +G+VHRD+K +N+L+D KL+
Sbjct: 718 DRLSRDLYCGIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLT 777
Query: 473 DFGFARGHMKPKNGVFALSETFCGSYAYASPEILKGVPYRPQDSDVWSMGVVLYAIVYG- 297
DFGF + + + G+ + +PE+L G + DV++ G++ + + G
Sbjct: 778 DFGFCITEV-------MMLGSIVGTPVHMAPELLSG--HYDSSVDVYAFGILFWYLCAGH 828
Query: 296 -RLPF 285
RLP+
Sbjct: 829 VRLPY 833
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.6
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 644 SLLDIIRKDQHIDETRGRRWFKQLVEAVDYCHERGVVHRDIKCENLLMD-HGLNIKLSDF 468
SL +I D +D + + K+ ++ +E + D+ +MD H ++KLSDF
Sbjct: 1358 SLSEIDNLDVSLDVSNPKNAGKKKIDVRAKLNEY-LDKADVIVNTPIMDAHFKDVKLSDF 1416
Query: 467 GFA 459
GF+
Sbjct: 1417 GFS 1419
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -3
Query: 827 NCQVAIKIISKFQAPGDYLKKFLP 756
+C ++ K GDY++++LP
Sbjct: 428 HCYCPVRFGRKADPNGDYIRRYLP 451
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,514
Number of Sequences: 438
Number of extensions: 5732
Number of successful extensions: 37
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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