Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15c03
(862 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019321-1|AAH19321.1| 221|Homo sapiens vacuolar protein sortin... 303 4e-82
BC006485-1|AAH06485.1| 221|Homo sapiens vacuolar protein sortin... 303 4e-82
AF316887-1|AAK00314.1| 221|Homo sapiens vacuolar sorting protei... 303 4e-82
AF182844-1|AAF00499.1| 221|Homo sapiens VPS28 protein protein. 303 4e-82
BC050713-1|AAH50713.1| 233|Homo sapiens vacuolar protein sortin... 250 4e-66
BC118918-1|AAI18919.1| 1302|Homo sapiens cingulin-like 1 protein. 33 1.0
BC112049-1|AAI12050.1| 1302|Homo sapiens cingulin-like 1 protein. 33 1.0
BC093827-1|AAH93827.1| 1302|Homo sapiens cingulin-like 1 protein. 33 1.0
AY274808-1|AAP42073.1| 1302|Homo sapiens KIAA1749 protein protein. 33 1.0
AK027863-1|BAB55415.1| 612|Homo sapiens protein ( Homo sapiens ... 33 1.0
AB051536-1|BAB21840.2| 1047|Homo sapiens KIAA1749 protein protein. 33 1.0
BC069099-1|AAH69099.1| 98|Homo sapiens keratin associated prot... 33 1.8
AK131313-1|BAD18477.1| 244|Homo sapiens protein ( Homo sapiens ... 33 1.8
AK056673-1|BAB71249.1| 883|Homo sapiens protein ( Homo sapiens ... 33 1.8
AY610514-1|AAT37906.1| 1302|Homo sapiens paracingulin protein. 32 3.1
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 31 5.4
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 31 5.4
M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein. 31 5.4
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 5.4
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 5.4
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 5.4
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 5.4
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 5.4
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 5.4
AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit... 31 5.4
BC146814-1|AAI46815.1| 1254|Homo sapiens DOCK9 protein protein. 31 7.1
BC034582-1|AAH34582.1| 98|Homo sapiens keratin associated prot... 31 7.1
AJ406932-1|CAC27571.1| 98|Homo sapiens keratin associated prot... 31 7.1
AK057946-1|BAB71619.1| 517|Homo sapiens protein ( Homo sapiens ... 30 9.4
>BC019321-1|AAH19321.1| 221|Homo sapiens vacuolar protein sorting
28 homolog (S. cerevisiae) protein.
Length = 221
Score = 303 bits (745), Expect = 4e-82
Identities = 140/204 (68%), Positives = 172/204 (84%)
Frame = -3
Query: 710 RPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQ 531
+PELYEE+KLYKNAREREK+DNMAEL+AVV T+Q LEKAY++DCV EYTAACSRLLVQ
Sbjct: 17 KPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQ 76
Query: 530 YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLF 351
YK AF+QVQ E +I+ F K+RLDCP A+ERI+E++P IKDDKGN N+ IA++VSLF
Sbjct: 77 YKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLF 136
Query: 350 ITLMDKLRLEFRAMDMIQPELRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDEL 171
IT+MDKLRLE RAMD IQP+LR+L +TM R+S LP DFEG+ V +WL LS MSASDEL
Sbjct: 137 ITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDEL 196
Query: 170 SEAQVRQLVFDLETSYGAFNKFLH 99
++QVRQ++FDLE++Y AFN+FLH
Sbjct: 197 DDSQVRQMLFDLESAYNAFNRFLH 220
>BC006485-1|AAH06485.1| 221|Homo sapiens vacuolar protein sorting
28 homolog (S. cerevisiae) protein.
Length = 221
Score = 303 bits (745), Expect = 4e-82
Identities = 140/204 (68%), Positives = 172/204 (84%)
Frame = -3
Query: 710 RPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQ 531
+PELYEE+KLYKNAREREK+DNMAEL+AVV T+Q LEKAY++DCV EYTAACSRLLVQ
Sbjct: 17 KPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQ 76
Query: 530 YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLF 351
YK AF+QVQ E +I+ F K+RLDCP A+ERI+E++P IKDDKGN N+ IA++VSLF
Sbjct: 77 YKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLF 136
Query: 350 ITLMDKLRLEFRAMDMIQPELRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDEL 171
IT+MDKLRLE RAMD IQP+LR+L +TM R+S LP DFEG+ V +WL LS MSASDEL
Sbjct: 137 ITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDEL 196
Query: 170 SEAQVRQLVFDLETSYGAFNKFLH 99
++QVRQ++FDLE++Y AFN+FLH
Sbjct: 197 DDSQVRQMLFDLESAYNAFNRFLH 220
>AF316887-1|AAK00314.1| 221|Homo sapiens vacuolar sorting protein
28 protein.
Length = 221
Score = 303 bits (745), Expect = 4e-82
Identities = 140/204 (68%), Positives = 172/204 (84%)
Frame = -3
Query: 710 RPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQ 531
+PELYEE+KLYKNAREREK+DNMAEL+AVV T+Q LEKAY++DCV EYTAACSRLLVQ
Sbjct: 17 KPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQ 76
Query: 530 YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLF 351
YK AF+QVQ E +I+ F K+RLDCP A+ERI+E++P IKDDKGN N+ IA++VSLF
Sbjct: 77 YKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLF 136
Query: 350 ITLMDKLRLEFRAMDMIQPELRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDEL 171
IT+MDKLRLE RAMD IQP+LR+L +TM R+S LP DFEG+ V +WL LS MSASDEL
Sbjct: 137 ITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDEL 196
Query: 170 SEAQVRQLVFDLETSYGAFNKFLH 99
++QVRQ++FDLE++Y AFN+FLH
Sbjct: 197 DDSQVRQMLFDLESAYNAFNRFLH 220
>AF182844-1|AAF00499.1| 221|Homo sapiens VPS28 protein protein.
Length = 221
Score = 303 bits (745), Expect = 4e-82
Identities = 140/204 (68%), Positives = 172/204 (84%)
Frame = -3
Query: 710 RPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQ 531
+PELYEE+KLYKNAREREK+DNMAEL+AVV T+Q LEKAY++DCV EYTAACSRLLVQ
Sbjct: 17 KPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQ 76
Query: 530 YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLF 351
YK AF+QVQ E +I+ F K+RLDCP A+ERI+E++P IKDDKGN N+ IA++VSLF
Sbjct: 77 YKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLF 136
Query: 350 ITLMDKLRLEFRAMDMIQPELRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDEL 171
IT+MDKLRLE RAMD IQP+LR+L +TM R+S LP DFEG+ V +WL LS MSASDEL
Sbjct: 137 ITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDEL 196
Query: 170 SEAQVRQLVFDLETSYGAFNKFLH 99
++QVRQ++FDLE++Y AFN+FLH
Sbjct: 197 DDSQVRQMLFDLESAYNAFNRFLH 220
>BC050713-1|AAH50713.1| 233|Homo sapiens vacuolar protein sorting
28 homolog (S. cerevisiae) protein.
Length = 233
Score = 250 bits (613), Expect = 4e-66
Identities = 115/167 (68%), Positives = 140/167 (83%)
Frame = -3
Query: 710 RPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQ 531
+PELYEE+KLYKNAREREK+DNMAEL+AVV T+Q LEKAY++DCV EYTAACSRLLVQ
Sbjct: 17 KPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQ 76
Query: 530 YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLF 351
YK AF+QVQ E +I+ F K+RLDCP A+ERI+E++P IKDDKGN N+ IA++VSLF
Sbjct: 77 YKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLF 136
Query: 350 ITLMDKLRLEFRAMDMIQPELRDLRDTMDRLSMLPDDFEGKLKVQEW 210
IT+MDKLRLE RAMD IQP+LR+L +TM R+S LP DFEG+ V +W
Sbjct: 137 ITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQW 183
>BC118918-1|AAI18919.1| 1302|Homo sapiens cingulin-like 1 protein.
Length = 1302
Score = 33.5 bits (73), Expect = 1.0
Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Frame = -3
Query: 722 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 549
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 757
Query: 548 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNKYI 372
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQD 816
Query: 371 AEIVSLFITLM--DKLRLEFRAMDM------IQPELRDLRDTMDRLSMLPDDFEGKLKVQ 216
+ + L+ + +L+ R+ ++ +Q ++ DL+ + +EG+++
Sbjct: 817 QAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKAKETLKKYEGEIRQL 876
Query: 215 EWLDKLSEMSASDELSEAQVRQLVFDLETSYG 120
E + L ++ + + R L +LE + G
Sbjct: 877 E--EALVHARKEEKEAVSARRALENELEAAQG 906
>BC112049-1|AAI12050.1| 1302|Homo sapiens cingulin-like 1 protein.
Length = 1302
Score = 33.5 bits (73), Expect = 1.0
Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Frame = -3
Query: 722 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 549
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 757
Query: 548 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNKYI 372
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQD 816
Query: 371 AEIVSLFITLM--DKLRLEFRAMDM------IQPELRDLRDTMDRLSMLPDDFEGKLKVQ 216
+ + L+ + +L+ R+ ++ +Q ++ DL+ + +EG+++
Sbjct: 817 QAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKAKETLKKYEGEIRQL 876
Query: 215 EWLDKLSEMSASDELSEAQVRQLVFDLETSYG 120
E + L ++ + + R L +LE + G
Sbjct: 877 E--EALVHARKEEKEAVSARRALENELEAAQG 906
>BC093827-1|AAH93827.1| 1302|Homo sapiens cingulin-like 1 protein.
Length = 1302
Score = 33.5 bits (73), Expect = 1.0
Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Frame = -3
Query: 722 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 549
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 757
Query: 548 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNKYI 372
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQD 816
Query: 371 AEIVSLFITLM--DKLRLEFRAMDM------IQPELRDLRDTMDRLSMLPDDFEGKLKVQ 216
+ + L+ + +L+ R+ ++ +Q ++ DL+ + +EG+++
Sbjct: 817 QAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKAKETLKKYEGEIRQL 876
Query: 215 EWLDKLSEMSASDELSEAQVRQLVFDLETSYG 120
E + L ++ + + R L +LE + G
Sbjct: 877 E--EALVHARKEEKEAVSARRALENELEAAQG 906
>AY274808-1|AAP42073.1| 1302|Homo sapiens KIAA1749 protein protein.
Length = 1302
Score = 33.5 bits (73), Expect = 1.0
Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Frame = -3
Query: 722 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 549
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 757
Query: 548 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNKYI 372
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQD 816
Query: 371 AEIVSLFITLM--DKLRLEFRAMDM------IQPELRDLRDTMDRLSMLPDDFEGKLKVQ 216
+ + L+ + +L+ R+ ++ +Q ++ DL+ + +EG+++
Sbjct: 817 QAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKAKETLKKYEGEIRQL 876
Query: 215 EWLDKLSEMSASDELSEAQVRQLVFDLETSYG 120
E + L ++ + + R L +LE + G
Sbjct: 877 E--EALVHARKEEKEAVSARRALENELEAAQG 906
>AK027863-1|BAB55415.1| 612|Homo sapiens protein ( Homo sapiens
cDNA FLJ14957 fis, clone PLACE4000009, weakly similar to
MYOSIN HEAVY CHAIN, NONMUSCLE TYPE B. ).
Length = 612
Score = 33.5 bits (73), Expect = 1.0
Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Frame = -3
Query: 722 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 549
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 13 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEGREDLLRKRE----- 67
Query: 548 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNKYI 372
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 68 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQD 126
Query: 371 AEIVSLFITLM--DKLRLEFRAMDM------IQPELRDLRDTMDRLSMLPDDFEGKLKVQ 216
+ + L+ + +L+ R+ ++ +Q ++ DL+ + +EG+++
Sbjct: 127 QAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKAKETLKKYEGEIRQL 186
Query: 215 EWLDKLSEMSASDELSEAQVRQLVFDLETSYG 120
E + L + ++ + + R L +LE + G
Sbjct: 187 E--EALVHVRKEEKEAVSARRALENELEAAQG 216
>AB051536-1|BAB21840.2| 1047|Homo sapiens KIAA1749 protein protein.
Length = 1047
Score = 33.5 bits (73), Expect = 1.0
Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Frame = -3
Query: 722 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 549
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 448 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 502
Query: 548 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNKYI 372
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 503 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQD 561
Query: 371 AEIVSLFITLM--DKLRLEFRAMDM------IQPELRDLRDTMDRLSMLPDDFEGKLKVQ 216
+ + L+ + +L+ R+ ++ +Q ++ DL+ + +EG+++
Sbjct: 562 QAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKAKETLKKYEGEIRQL 621
Query: 215 EWLDKLSEMSASDELSEAQVRQLVFDLETSYG 120
E + L ++ + + R L +LE + G
Sbjct: 622 E--EALVHARKEEKEAVSARRALENELEAAQG 651
>BC069099-1|AAH69099.1| 98|Homo sapiens keratin associated protein
3-3 protein.
Length = 98
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 557 PCIPVLAHNHACMPSPGAEGYRRQHRAQPCYHAFL 661
PC+P ++C P+PG E QPCY L
Sbjct: 60 PCVPTCFLLNSCQPTPGLETLNLTTFTQPCYEPCL 94
>AK131313-1|BAD18477.1| 244|Homo sapiens protein ( Homo sapiens
cDNA FLJ16301 fis, clone PLACE7000333. ).
Length = 244
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = -3
Query: 419 KPNLIKDDKGNTNKYIAEIVSLFITLMDKLRLEFRAMDMIQPELRDLRDTMDRLSMLPDD 240
KP IK DKG+ + +T+++ RA I+ LRDL+ +D +++ D
Sbjct: 85 KPTKIKGDKGHYIMVKGSMQQEELTILNIYAPNTRAPRFIKQVLRDLQRDLDSHTIIMGD 144
Query: 239 FEGKLKVQE 213
F +L + E
Sbjct: 145 FNTELSILE 153
>AK056673-1|BAB71249.1| 883|Homo sapiens protein ( Homo sapiens cDNA
FLJ32111 fis, clone OCBBF2001528, weakly similar to
MYOSIN HEAVY CHAIN, SMOOTH MUSCLE ISOFORM. ).
Length = 883
Score = 32.7 bits (71), Expect = 1.8
Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 11/181 (6%)
Frame = -3
Query: 722 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 549
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 757
Query: 548 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNKYI 372
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQD 816
Query: 371 AEIVSLFITLM--DKLRLEFRAMDM------IQPELRDLRDTMDRLSMLPDDFEGKLKVQ 216
+ + L+ + L+ R+ ++ +Q ++ DL+ + FEG+++
Sbjct: 817 QAGTEMRVKLLQEENENLQGRSEELERRVAQLQRQIEDLKGDEAKAKETLKKFEGEIRQL 876
Query: 215 E 213
E
Sbjct: 877 E 877
>AY610514-1|AAT37906.1| 1302|Homo sapiens paracingulin protein.
Length = 1302
Score = 31.9 bits (69), Expect = 3.1
Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Frame = -3
Query: 722 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 549
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEGREDLLRKRE----- 757
Query: 548 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNKYI 372
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQD 816
Query: 371 AEIVSLFITLM--DKLRLEFRAMDM------IQPELRDLRDTMDRLSMLPDDFEGKLKVQ 216
+ + L+ + +L+ R+ ++ +Q ++ DL+ + +EG+++
Sbjct: 817 QAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKAKETLKKYEGEIRQL 876
Query: 215 EWLDKLSEMSASDELSEAQVRQLVFDLETSYG 120
E + L ++ + + R L +LE + G
Sbjct: 877 E--EALVHARKEEKEAVSARRALENELEGAQG 906
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -3
Query: 290 LRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDELSEAQVRQLVFDLETSYGAFN 111
LR L DT+ +LS +P+D KL+ + + + +A D L AQ+ +L +L+ +N
Sbjct: 2013 LRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVL--AQITELHQNLDGLKKNYN 2070
Query: 110 K 108
K
Sbjct: 2071 K 2071
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein.
Length = 3110
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -3
Query: 290 LRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDELSEAQVRQLVFDLETSYGAFN 111
LR L DT+ +LS +P+D KL+ + + + +A D L AQ+ +L +L+ +N
Sbjct: 2013 LRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVL--AQITELHQNLDGLKKNYN 2070
Query: 110 K 108
K
Sbjct: 2071 K 2071
>M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein.
Length = 1130
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -3
Query: 290 LRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDELSEAQVRQLVFDLETSYGAFN 111
LR L DT+ +LS +P+D KL+ + + + +A D L AQ+ +L +L+ +N
Sbjct: 33 LRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVL--AQITELHQNLDGLKKNYN 90
Query: 110 K 108
K
Sbjct: 91 K 91
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -3
Query: 290 LRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDELSEAQVRQLVFDLETSYGAFN 111
LR L DT+ +LS +P+D KL+ + + + +A D L AQ+ +L +L+ +N
Sbjct: 2013 LRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVL--AQITELHQNLDGLKKNYN 2070
Query: 110 K 108
K
Sbjct: 2071 K 2071
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -3
Query: 290 LRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDELSEAQVRQLVFDLETSYGAFN 111
LR L DT+ +LS +P+D KL+ + + + +A D L AQ+ +L +L+ +N
Sbjct: 2013 LRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVL--AQITELHQNLDGLKKNYN 2070
Query: 110 K 108
K
Sbjct: 2071 K 2071
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -3
Query: 290 LRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDELSEAQVRQLVFDLETSYGAFN 111
LR L DT+ +LS +P+D KL+ + + + +A D L AQ+ +L +L+ +N
Sbjct: 2013 LRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVL--AQITELHQNLDGLKKNYN 2070
Query: 110 K 108
K
Sbjct: 2071 K 2071
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -3
Query: 290 LRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDELSEAQVRQLVFDLETSYGAFN 111
LR L DT+ +LS +P+D KL+ + + + +A D L AQ+ +L +L+ +N
Sbjct: 2013 LRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVL--AQITELHQNLDGLKKNYN 2070
Query: 110 K 108
K
Sbjct: 2071 K 2071
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -3
Query: 290 LRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDELSEAQVRQLVFDLETSYGAFN 111
LR L DT+ +LS +P+D KL+ + + + +A D L AQ+ +L +L+ +N
Sbjct: 2013 LRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVL--AQITELHQNLDGLKKNYN 2070
Query: 110 K 108
K
Sbjct: 2071 K 2071
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -3
Query: 290 LRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDELSEAQVRQLVFDLETSYGAFN 111
LR L DT+ +LS +P+D KL+ + + + +A D L AQ+ +L +L+ +N
Sbjct: 2013 LRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVL--AQITELHQNLDGLKKNYN 2070
Query: 110 K 108
K
Sbjct: 2071 K 2071
>AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit
precursor variant protein.
Length = 1853
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -3
Query: 290 LRDLRDTMDRLSMLPDDFEGKLKVQEWLDKLSEMSASDELSEAQVRQLVFDLETSYGAFN 111
LR L DT+ +LS +P+D KL+ + + + +A D L AQ+ +L +L+ +N
Sbjct: 748 LRTLNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVL--AQITELHQNLDGLKKNYN 805
Query: 110 K 108
K
Sbjct: 806 K 806
>BC146814-1|AAI46815.1| 1254|Homo sapiens DOCK9 protein protein.
Length = 1254
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -3
Query: 707 PELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQ 567
PE Y+EIK+ + EKH + L+ V C RD V Q
Sbjct: 708 PEFYDEIKIELPTQLHEKHHLLLTLFHVSCDNSSKGSTKKRDVVETQ 754
>BC034582-1|AAH34582.1| 98|Homo sapiens keratin associated protein
3-2 protein.
Length = 98
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +2
Query: 518 KPLCTARGDDCMPPC------IPVLAHNHACMPSPGAEGYRRQHRAQPC 646
+P+C D+C PPC +P ++C P+PG E QPC
Sbjct: 44 EPICC---DNCPPPCHIPQPCVPTCFLLNSCQPTPGLETLNLTTFTQPC 89
>AJ406932-1|CAC27571.1| 98|Homo sapiens keratin associated protein
3.2 protein.
Length = 98
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +2
Query: 518 KPLCTARGDDCMPPC------IPVLAHNHACMPSPGAEGYRRQHRAQPC 646
+P+C D+C PPC +P ++C P+PG E QPC
Sbjct: 44 EPICC---DNCPPPCHIPQPCVPTCFLLNSCQPTPGLETLNLTTFTQPC 89
>AK057946-1|BAB71619.1| 517|Homo sapiens protein ( Homo sapiens
cDNA FLJ25217 fis, clone REC08938, highly similar to
Oryctolagus cuniculus Na+/glucose cotransporter-related
protein ).
Length = 517
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 436 SKAAGQSNLYLATKASILGNS-SACTCLKATLYC 534
S + +S+ YL+T S G S SACTCL YC
Sbjct: 16 STSPQRSSPYLSTFRSATGASGSACTCLSCPCYC 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,224,072
Number of Sequences: 237096
Number of extensions: 2448488
Number of successful extensions: 10438
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10438
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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