Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15b14
(748 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 33 0.004
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 33 0.004
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 33 0.004
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 32 0.005
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 32 0.007
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 31 0.011
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 31 0.011
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 31 0.011
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 31 0.011
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 31 0.011
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 31 0.011
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 31 0.011
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 31 0.015
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 30 0.020
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 30 0.020
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 30 0.020
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 30 0.020
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 30 0.020
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 30 0.020
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 28 0.11
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 27 0.14
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 26 0.33
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 25 1.00
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 25 1.00
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 24 1.3
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 23 2.3
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 23 2.3
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 23 3.0
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 23 3.0
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 23 4.0
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 5.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 5.3
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 7.0
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 7.0
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 9.3
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 32.7 bits (71), Expect = 0.004
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = -3
Query: 392 ENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCV----REHRIPKDFRFERQKKD 225
E HD+ V EK N H RE +D E +KKD
Sbjct: 179 EEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKD 238
Query: 224 KN--KMPNAMD--VDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTSDKKSRDETNMDCS 66
+ K+ N + ++E S K + + + QK++ ++N Y + TS ++SRD T + S
Sbjct: 239 RQYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERS 298
Query: 65 ME 60
E
Sbjct: 299 RE 300
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 32.7 bits (71), Expect = 0.004
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = -3
Query: 392 ENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCV----REHRIPKDFRFERQKKD 225
E HD+ V EK N H RE +D E +KKD
Sbjct: 190 EEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKD 249
Query: 224 KN--KMPNAMD--VDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTSDKKSRDETNMDCS 66
+ K+ N + ++E S K + + + QK++ ++N Y + TS ++SRD T + S
Sbjct: 250 RQYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERS 309
Query: 65 ME 60
E
Sbjct: 310 RE 311
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 32.7 bits (71), Expect = 0.004
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = -3
Query: 392 ENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCV----REHRIPKDFRFERQKKD 225
E HD+ V EK N H RE +D E +KKD
Sbjct: 179 EEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKD 238
Query: 224 KN--KMPNAMD--VDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTSDKKSRDETNMDCS 66
+ K+ N + ++E S K + + + QK++ ++N Y + TS ++SRD T + S
Sbjct: 239 RQYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERS 298
Query: 65 ME 60
E
Sbjct: 299 RE 300
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 32.3 bits (70), Expect = 0.005
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTS 105
RE+R KD R+E+ +K K+ ++E S K + + + QK++ ++N Y + TS
Sbjct: 248 REYR-KKDRRYEKLHNEKEKL-----LEERTSRKRYSRSREREQKSYKNENSYRKYRETS 301
Query: 104 DKKSRDETNMDCSME 60
++SRD+T + S E
Sbjct: 302 KERSRDKTERERSKE 316
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 31.9 bits (69), Expect = 0.007
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTS 105
RE+R KD R+E+ +K K+ ++E S K + + + QK++ ++N Y + TS
Sbjct: 243 REYR-KKDRRYEKLHNEKEKL-----LEERTSRKRYSRSREREQKSYKNENSYRKYRETS 296
Query: 104 DKKSRDETNMDCSME 60
++SRD T + S E
Sbjct: 297 KERSRDRTERERSKE 311
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.011
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTS 105
RE+R KD R+E+ +K K ++E S K + + + QK++ ++N Y + TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKF-----LEERTSRKRYSRSREREQKSYKNENSYRKYRKTS 63
Query: 104 DKKSRDETNMDCSME 60
++SRD T + S E
Sbjct: 64 KERSRDRTERERSKE 78
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.011
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTS 105
RE+R KD R+E+ +K K ++E S K + + + QK++ ++N Y + TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKF-----LEERTSRKRYSRSREREQKSYKNENSYRKYRKTS 63
Query: 104 DKKSRDETNMDCSME 60
++SRD T + S E
Sbjct: 64 KERSRDRTERERSKE 78
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.011
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTS 105
RE+R KD R+E+ +K K ++E S K + + + QK++ ++N Y + TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKF-----LEERTSRKRYSRSREREQKSYKNENSYRKYRKTS 63
Query: 104 DKKSRDETNMDCSME 60
++SRD T + S E
Sbjct: 64 KERSRDRTERERSKE 78
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.011
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTS 105
RE+R KD R+E+ +K K ++E S K + + + QK++ ++N Y + TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKF-----LEERTSRKRYSRSREREQKSYKNENSYRKYRKTS 63
Query: 104 DKKSRDETNMDCSME 60
++SRD T + S E
Sbjct: 64 KERSRDRTERERSKE 78
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.011
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTS 105
RE+R KD R+E+ +K K ++E S K + + + QK++ ++N Y + TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKF-----LEERTSRKRYSRSREREQKSYKNENSYRKYRKTS 63
Query: 104 DKKSRDETNMDCSME 60
++SRD T + S E
Sbjct: 64 KERSRDRTERERSKE 78
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.011
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTS 105
RE+R KD R+E+ +K K ++E S K + + + QK++ ++N Y + TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKF-----LEERTSRKRYSRSREREQKSYKNENSYRKYRKTS 63
Query: 104 DKKSRDETNMDCSME 60
++SRD T + S E
Sbjct: 64 KERSRDRTERERSKE 78
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 31.1 bits (67), Expect = 0.011
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Frame = -3
Query: 311 FNNTADRLDHCVREHRIPKDFRFERQKKDKN--KMPNAMD--VDEAKSNKFHLNNSK--Q 150
F +T+ R RE +D E +KKD+ K+ N + ++E S K + + + Q
Sbjct: 224 FQHTSSRYS---RERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQ 280
Query: 149 KTF-SKNKYAGKKFTSDKKSRDETNMDCSME 60
K++ ++N Y + TS ++SRD T + S E
Sbjct: 281 KSYKNENSYRKYRETSKERSRDRTERERSRE 311
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 30.7 bits (66), Expect = 0.015
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHLNNSK--QKTF-SKNKYAGKKFTS 105
RE++ KD R+E+ +K K+ ++E S K + + + QK++ ++N Y + TS
Sbjct: 10 REYK-EKDRRYEKLHNEKEKL-----LEERTSRKRYSRSREREQKSYKNENSYRKYRETS 63
Query: 104 DKKSRDETNMDCSME 60
++SRD T + S E
Sbjct: 64 KERSRDRTERERSRE 78
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 30.3 bits (65), Expect = 0.020
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNK-FHLNNSKQKTFSKNKYAGKKF--TS 105
RE+R KD R+E+ +K K+ ++E S K + + ++K KN+ + +K+ TS
Sbjct: 10 REYR-EKDRRYEKLHNEKEKL-----LEERTSRKRYSRSREREKKSYKNENSYRKYRETS 63
Query: 104 DKKSRDETNMDCSME 60
++SRD + S E
Sbjct: 64 KERSRDRKERERSKE 78
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 30.3 bits (65), Expect = 0.020
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNK-FHLNNSKQKTFSKNKYAGKKF--TS 105
RE+R KD R+E+ +K K+ ++E S K + + ++K KN+ + +K+ TS
Sbjct: 10 REYR-EKDRRYEKLHNEKEKL-----LEERTSRKRYSRSREREKKSYKNENSYRKYRETS 63
Query: 104 DKKSRDETNMDCSME 60
++SRD + S E
Sbjct: 64 KERSRDRKERERSKE 78
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 30.3 bits (65), Expect = 0.020
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNK-FHLNNSKQKTFSKNKYAGKKF--TS 105
RE+R KD R+E+ +K K+ ++E S K + + ++K KN+ + +K+ TS
Sbjct: 10 REYR-EKDRRYEKLHNEKEKL-----LEERTSRKRYSRSREREKKSYKNENSYRKYRETS 63
Query: 104 DKKSRDETNMDCSME 60
++SRD + S E
Sbjct: 64 KERSRDRKERERSKE 78
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 30.3 bits (65), Expect = 0.020
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNK-FHLNNSKQKTFSKNKYAGKKF--TS 105
RE+R KD R+E+ +K K+ ++E S K + + ++K KN+ + +K+ TS
Sbjct: 10 REYR-EKDRRYEKLHNEKEKL-----LEERTSRKRYSRSREREKKSYKNENSYRKYRETS 63
Query: 104 DKKSRDETNMDCSME 60
++SRD + S E
Sbjct: 64 KERSRDRKERERSKE 78
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 30.3 bits (65), Expect = 0.020
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNKFHL--NNSKQKTF-SKNKYAGKKFTS 105
RE++ KD R+E+ +K K+ ++E S K + +QK++ ++N Y + TS
Sbjct: 243 REYK-EKDRRYEKLHNEKEKL-----LEERTSRKRYSCSREREQKSYKNENSYRKYRETS 296
Query: 104 DKKSRDETNMDCSME 60
++SRD T + S E
Sbjct: 297 KERSRDRTERERSRE 311
Score = 24.2 bits (50), Expect = 1.3
Identities = 20/106 (18%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = -3
Query: 407 DLHIQENHDSYFAVMAEK--KPSYCCYIEECKQKFNNTADRLDHCVREHR-IPKDFRFER 237
D ++ H+ ++ E+ + Y C E ++ + N ++ R++R K+ +R
Sbjct: 249 DRRYEKLHNEKEKLLEERTSRKRYSCSREREQKSYKN-----ENSYRKYRETSKERSRDR 303
Query: 236 QKKDKNKMPNAMDVDEAKSNK-FHLNNSKQKTFSKNKYAGKKFTSD 102
++++++ P + + SNK H NN+ + ++ N Y + ++
Sbjct: 304 TERERSREPKIIS---SLSNKTIHNNNNYKYNYNNNNYNNNNYNNN 346
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 30.3 bits (65), Expect = 0.020
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 REHRIPKDFRFERQKKDKNKMPNAMDVDEAKSNK-FHLNNSKQKTFSKNKYAGKKF--TS 105
RE+R KD R+E+ +K K+ ++E S K + + ++K KN+ + +K+ TS
Sbjct: 243 REYR-EKDRRYEKLHNEKEKL-----LEERTSRKRYSRSREREKKSYKNENSYRKYRETS 296
Query: 104 DKKSRDETNMDCSME 60
++SRD + S E
Sbjct: 297 KERSRDRKERERSKE 311
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 27.9 bits (59), Expect = 0.11
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -3
Query: 530 CSIPGCKHIADTLLDYENHYNATHRY---SCAQCKKVLPSPHFLDLHIQENHDSYFAVM 363
C PGC+ I + + H N H S AQ + + L++ +Q+ D A+M
Sbjct: 283 CKWPGCEVICEDYQAFLKHLNTEHTLDDRSTAQARVRMQVVSQLEIQLQKERDRLTAMM 341
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 27.5 bits (58), Expect = 0.14
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = -3
Query: 470 NATHRYSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADR 291
+A ++C C KVL S L H+ + H AE++ Y C I C++ + +
Sbjct: 1 SAKKLFTCQLCGKVLCSKASLKRHVADKH-------AERQEEYRCVI--CERVYCSRNSL 51
Query: 290 LDHCVREHR 264
+ H H+
Sbjct: 52 MTHIYTYHK 60
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -3
Query: 482 ENHYNATHRYSCAQCKKVLPSPHFLDLHIQENHDS 378
+ H Y C C++V S + L HI H S
Sbjct: 27 DKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKS 61
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 26.2 bits (55), Expect = 0.33
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = -3
Query: 455 YSCAQCKKVLPSPHFLDLHIQENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDHCV 276
+ C C K+L S L HIQ H K+P C I CK+ +++ +H
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVH-----TRPSKEP--ICNI--CKRVYSSLNSLRNHKS 53
Query: 275 REHRIPKDFRFERQKKDKNKM 213
HR + + E+Q+K+ +M
Sbjct: 54 IYHR--QHSKNEQQRKEMEQM 72
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 24.6 bits (51), Expect = 1.00
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 545 FKQTPCSIPGCKHIADTLLDYENHYNATHRYSCAQCKKVLPSPHFLDLHIQE 390
FK CS C + + ++H N ++Y CA C H L LH+++
Sbjct: 17 FKCEKCSY-SCVNKSMLNSHLKSHSNV-YQYRCANCTYATKYCHSLKLHLRK 66
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 24.6 bits (51), Expect = 1.00
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 455 YSCAQCKKVLPSPHFLDLHIQENHDS 378
Y C C + S ++LHI+ + DS
Sbjct: 260 YKCTLCHETFGSKKTMELHIKTHSDS 285
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 24.2 bits (50), Expect = 1.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 616 CLYMINNQLDLEFTMWTME 560
C YM + +L F++W ME
Sbjct: 341 CSYMAHEKLSYAFSVWRME 359
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 23.4 bits (48), Expect = 2.3
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 691 FGCQPFWNQLNFRRRQ 738
FG + FWN +NF +
Sbjct: 541 FGREDFWNSINFNENK 556
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 23.4 bits (48), Expect = 2.3
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 691 FGCQPFWNQLNFRRRQ 738
FG + FWN +NF +
Sbjct: 541 FGREDFWNSINFNENK 556
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/46 (21%), Positives = 26/46 (56%)
Frame = +2
Query: 545 IGCYNFHRPHRKFQV*LVVYHV*TEHHQASVFLLHIL*ASPIEILH 682
IGC+N H+P ++ + +V + T ++ ++H+ ++ + +H
Sbjct: 328 IGCWNEHQPLQRENMDMVAQNEETLQTVVAMKMMHLPQSNKMNRMH 373
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 563 GNYNTQFKQTPCSI 522
GN N Q QTPC +
Sbjct: 68 GNINNQLFQTPCEL 81
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 467 ATHRYSCAQCKKVLPSPHFLDLHIQ 393
A +SC C+KV S L +HI+
Sbjct: 13 AKKSFSCKYCEKVYVSLGALKMHIR 37
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 133 INMQERNSQATRNRGMKQIWT 71
I++ E+N T N + QIWT
Sbjct: 43 IDVDEKNQILTTNCWVTQIWT 63
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 54 ER*FTEMNNPLIKENDGI 1
ER F+ NPL++E+D +
Sbjct: 501 ERSFSGSRNPLLQEHDSV 518
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 489 RLRKPLQRDAQVLVRSMQEGS 427
+L+KP Q D + R +EGS
Sbjct: 436 KLKKPRQGDGAAVKRKSREGS 456
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 114 FLSCIFIFAKRLLFAIV 164
FLS FIFA + FA+V
Sbjct: 281 FLSFAFIFATIIQFAVV 297
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 524 IPGCKHIADTLLDYENHYNATHR 456
+P KH+A D+ + THR
Sbjct: 160 VPSVKHVAKCATDFSSWPYDTHR 182
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -3
Query: 248 RFERQKKDKNKMPNAMDVDEAKSNKFHLNNSKQKTFSKNKY 126
R ER++ + K+ +++ SN ++ NN+ +K + Y
Sbjct: 292 RRERERSKEPKIISSLSNSCNYSNNYYNNNNYKKLYYNINY 332
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,865
Number of Sequences: 438
Number of extensions: 5402
Number of successful extensions: 40
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -