Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15a18
(683 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT014654-1|AAT27278.1| 217|Drosophila melanogaster RE06042p pro... 307 8e-84
AE014296-2043|AAF50002.2| 217|Drosophila melanogaster CG7283-PA... 307 8e-84
AY113239-1|AAM29244.1| 216|Drosophila melanogaster AT11516p pro... 209 3e-54
AE014297-1926|AAF55120.1| 216|Drosophila melanogaster CG3843-PA... 209 3e-54
BT001825-1|AAN71580.1| 155|Drosophila melanogaster RH43519p pro... 200 1e-51
BT001758-1|AAN71513.1| 150|Drosophila melanogaster RH06366p pro... 173 1e-43
AE014296-2045|AAN12245.1| 140|Drosophila melanogaster CG7283-PC... 173 1e-43
AE014296-2044|AAN12244.1| 57|Drosophila melanogaster CG7283-PB... 95 8e-20
AY069795-1|AAL39940.1| 681|Drosophila melanogaster SD03546p pro... 33 0.48
AE014134-1531|AAF52687.1| 681|Drosophila melanogaster CG13096-P... 33 0.48
AY051627-1|AAK93051.1| 517|Drosophila melanogaster GH27756p pro... 30 3.4
AE014298-2517|AAF48693.1| 517|Drosophila melanogaster CG4955-PA... 30 3.4
>BT014654-1|AAT27278.1| 217|Drosophila melanogaster RE06042p
protein.
Length = 217
Score = 307 bits (754), Expect = 8e-84
Identities = 155/208 (74%), Positives = 166/208 (79%)
Frame = -1
Query: 632 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 453
M+SKVSRDTLYE VN +L++S KKR FLETVELQIGLKNYDPQKDKRFSGTVKLK+IPR
Sbjct: 1 MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
Query: 452 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQI 273
PKM+VC+LGDQQHCDEAK NV M ASESLIKQI
Sbjct: 61 PKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQI 120
Query: 272 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 93
PRLLGPGLNKAGKFP LLSHQESM KI+EVK TIKFQMKKVLCLSVAVGHV M DELA
Sbjct: 121 PRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELA 180
Query: 92 QNVHLSINFLVSLLKKHWQNVRSLHMKS 9
QNV+LSINFLVSLLKK+WQNVRSLH+KS
Sbjct: 181 QNVNLSINFLVSLLKKNWQNVRSLHVKS 208
>AE014296-2043|AAF50002.2| 217|Drosophila melanogaster CG7283-PA,
isoform A protein.
Length = 217
Score = 307 bits (754), Expect = 8e-84
Identities = 155/208 (74%), Positives = 166/208 (79%)
Frame = -1
Query: 632 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 453
M+SKVSRDTLYE VN +L++S KKR FLETVELQIGLKNYDPQKDKRFSGTVKLK+IPR
Sbjct: 1 MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
Query: 452 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQI 273
PKM+VC+LGDQQHCDEAK NV M ASESLIKQI
Sbjct: 61 PKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQI 120
Query: 272 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 93
PRLLGPGLNKAGKFP LLSHQESM KI+EVK TIKFQMKKVLCLSVAVGHV M DELA
Sbjct: 121 PRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELA 180
Query: 92 QNVHLSINFLVSLLKKHWQNVRSLHMKS 9
QNV+LSINFLVSLLKK+WQNVRSLH+KS
Sbjct: 181 QNVNLSINFLVSLLKKNWQNVRSLHVKS 208
>AY113239-1|AAM29244.1| 216|Drosophila melanogaster AT11516p
protein.
Length = 216
Score = 209 bits (510), Expect = 3e-54
Identities = 110/208 (52%), Positives = 140/208 (67%)
Frame = -1
Query: 632 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 453
M SKVSRDT+Y V +L +S+ K + LETVELQIGL++YDP K KRF G+V L ++
Sbjct: 1 MVSKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAV 60
Query: 452 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQI 273
P+++VCV GDQ+HC +AK + V C+ ASES+IKQI
Sbjct: 61 PQLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQI 120
Query: 272 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 93
PRLLGPGL AGKF L+ ESM+ KI ++ T K MK++ CLSV VGHV M P+ELA
Sbjct: 121 PRLLGPGLTNAGKFLTPLARGESMSSKI-KILSTKKKHMKRMECLSVNVGHVGMHPEELA 179
Query: 92 QNVHLSINFLVSLLKKHWQNVRSLHMKS 9
+N+ +SINFLVSLLK +WQNVRSLH+KS
Sbjct: 180 RNIAISINFLVSLLKDNWQNVRSLHIKS 207
>AE014297-1926|AAF55120.1| 216|Drosophila melanogaster CG3843-PA
protein.
Length = 216
Score = 209 bits (510), Expect = 3e-54
Identities = 110/208 (52%), Positives = 140/208 (67%)
Frame = -1
Query: 632 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 453
M SKVSRDT+Y V +L +S+ K + LETVELQIGL++YDP K KRF G+V L ++
Sbjct: 1 MVSKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAV 60
Query: 452 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQI 273
P+++VCV GDQ+HC +AK + V C+ ASES+IKQI
Sbjct: 61 PQLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQI 120
Query: 272 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 93
PRLLGPGL AGKF L+ ESM+ KI ++ T K MK++ CLSV VGHV M P+ELA
Sbjct: 121 PRLLGPGLTNAGKFLTPLARGESMSSKI-KILSTKKKHMKRMECLSVNVGHVGMHPEELA 179
Query: 92 QNVHLSINFLVSLLKKHWQNVRSLHMKS 9
+N+ +SINFLVSLLK +WQNVRSLH+KS
Sbjct: 180 RNIAISINFLVSLLKDNWQNVRSLHIKS 207
>BT001825-1|AAN71580.1| 155|Drosophila melanogaster RH43519p
protein.
Length = 155
Score = 200 bits (489), Expect = 1e-51
Identities = 103/146 (70%), Positives = 109/146 (74%)
Frame = -1
Query: 446 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPR 267
M+VC+LGDQQHCDEAK NV M ASESLIKQIPR
Sbjct: 1 MKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPR 60
Query: 266 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 87
LLGPGLNKAGKFP LLSHQESM KI+EVK TIKFQMKKVLCLSVAVGHV M DELAQN
Sbjct: 61 LLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQN 120
Query: 86 VHLSINFLVSLLKKHWQNVRSLHMKS 9
V+LSINFLVSLLKK+WQNVRSLH+KS
Sbjct: 121 VNLSINFLVSLLKKNWQNVRSLHVKS 146
>BT001758-1|AAN71513.1| 150|Drosophila melanogaster RH06366p
protein.
Length = 150
Score = 173 bits (422), Expect = 1e-43
Identities = 85/96 (88%), Positives = 89/96 (92%)
Frame = -1
Query: 296 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 117
SESLIKQIPRLLGPGLNKAGKFP LLSHQESM KI+EVK TIKFQMKKVLCLSVAVGHV
Sbjct: 46 SESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHV 105
Query: 116 DMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 9
M DELAQNV+LSINFLVSLLKK+WQNVRSLH+KS
Sbjct: 106 GMKSDELAQNVNLSINFLVSLLKKNWQNVRSLHVKS 141
Score = 39.5 bits (88), Expect = 0.004
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = -1
Query: 632 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYD 507
M+SKVSRDTLYE VN +L++S KK N + + ++ K+YD
Sbjct: 1 MASKVSRDTLYEGVNGLLEASAKKKLNKNKKLVKKLA-KSYD 41
>AE014296-2045|AAN12245.1| 140|Drosophila melanogaster CG7283-PC,
isoform C protein.
Length = 140
Score = 173 bits (422), Expect = 1e-43
Identities = 85/96 (88%), Positives = 89/96 (92%)
Frame = -1
Query: 296 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 117
SESLIKQIPRLLGPGLNKAGKFP LLSHQESM KI+EVK TIKFQMKKVLCLSVAVGHV
Sbjct: 36 SESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHV 95
Query: 116 DMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 9
M DELAQNV+LSINFLVSLLKK+WQNVRSLH+KS
Sbjct: 96 GMKSDELAQNVNLSINFLVSLLKKNWQNVRSLHVKS 131
>AE014296-2044|AAN12244.1| 57|Drosophila melanogaster CG7283-PB,
isoform B protein.
Length = 57
Score = 95.1 bits (226), Expect = 8e-20
Identities = 45/54 (83%), Positives = 49/54 (90%)
Frame = -1
Query: 632 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 471
M+SKVSRDTLYE VN +L++S KKR FLETVELQIGLKNYDPQKDKRFSGTVK
Sbjct: 1 MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVK 54
>AY069795-1|AAL39940.1| 681|Drosophila melanogaster SD03546p
protein.
Length = 681
Score = 32.7 bits (71), Expect = 0.48
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = -1
Query: 161 QMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMK 12
Q+ K ++V VG+ ++T ++LA+N+ L I L + N+RS+++K
Sbjct: 450 QLSKGDLIAVPVGNHEITAEQLAENILLVIKQLQEVYPGGLANIRSMYLK 499
>AE014134-1531|AAF52687.1| 681|Drosophila melanogaster CG13096-PA
protein.
Length = 681
Score = 32.7 bits (71), Expect = 0.48
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = -1
Query: 161 QMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMK 12
Q+ K ++V VG+ ++T ++LA+N+ L I L + N+RS+++K
Sbjct: 450 QLSKGDLIAVPVGNHEITAEQLAENILLVIKQLQEVYPGGLANIRSMYLK 499
>AY051627-1|AAK93051.1| 517|Drosophila melanogaster GH27756p
protein.
Length = 517
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 303 ESIKFFGQFLDKLFVLIQFFQSLSIHTWHIQGFSLVTMLLVSKNAN 440
E + FF FL ++ ++ FF +I W G+ +V +L+ KNA+
Sbjct: 339 EQLNFFITFLLEVLGVLVFFAICTITFWITLGYHVVQLLVDLKNAD 384
>AE014298-2517|AAF48693.1| 517|Drosophila melanogaster CG4955-PA
protein.
Length = 517
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 303 ESIKFFGQFLDKLFVLIQFFQSLSIHTWHIQGFSLVTMLLVSKNAN 440
E + FF FL ++ ++ FF +I W G+ +V +L+ KNA+
Sbjct: 339 EQLNFFITFLLEVLGVLVFFAICTITFWITLGYHVVQLLVDLKNAD 384
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,441,202
Number of Sequences: 53049
Number of extensions: 662494
Number of successful extensions: 1622
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1615
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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