Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15a17
(841 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 453 e-128
03_01_0034 + 318432-318825,318902-319851 451 e-127
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 451 e-127
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 451 e-127
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 450 e-127
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 450 e-127
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 449 e-126
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 443 e-124
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 211 6e-55
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 206 2e-53
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 206 2e-53
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 205 4e-53
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 118 4e-27
03_06_0181 - 32180321-32180491,32180849-32181010 29 3.5
02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117 29 3.5
08_02_1008 - 23508377-23508541,23508940-23509116 29 6.1
05_01_0120 - 828834-831143 29 6.1
03_06_0386 + 33555682-33556344,33557138-33557299 29 6.1
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 28 8.1
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 453 bits (1116), Expect = e-128
Identities = 203/237 (85%), Positives = 226/237 (95%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
+N DE +DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKL
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 253
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
AVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT
Sbjct: 254 AVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTA 313
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTA 270
+A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPPRGLKM+ATF+GN+T+
Sbjct: 314 SAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTS 373
Query: 269 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 374 IQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 451 bits (1111), Expect = e-127
Identities = 203/237 (85%), Positives = 225/237 (94%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
+N DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKL
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 253
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
AVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT
Sbjct: 254 AVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTA 313
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTA 270
+A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGN+T+
Sbjct: 314 SAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTS 373
Query: 269 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 374 IQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 451 bits (1111), Expect = e-127
Identities = 202/237 (85%), Positives = 226/237 (95%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
+N DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKL
Sbjct: 215 ENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 274
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
AVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT
Sbjct: 275 AVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTA 334
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTA 270
+A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGN+T+
Sbjct: 335 SAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTS 394
Query: 269 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 395 IQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 451
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 451 bits (1111), Expect = e-127
Identities = 202/237 (85%), Positives = 226/237 (95%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
+N DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKL
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 253
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
AVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT
Sbjct: 254 AVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTA 313
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTA 270
+A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGN+T+
Sbjct: 314 SAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTS 373
Query: 269 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 374 IQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 450 bits (1110), Expect = e-127
Identities = 201/237 (84%), Positives = 226/237 (95%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
+N DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKL
Sbjct: 374 ENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 433
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
AVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT
Sbjct: 434 AVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTA 493
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTA 270
+A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TF+GN+T+
Sbjct: 494 SAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTS 553
Query: 269 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 554 IQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 610
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 450 bits (1109), Expect = e-127
Identities = 202/237 (85%), Positives = 225/237 (94%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
+N DE +DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKL
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 253
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
AVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT
Sbjct: 254 AVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTA 313
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTA 270
+A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKM++TFIGN+T+
Sbjct: 314 SAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTS 373
Query: 269 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 374 IQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 449 bits (1106), Expect = e-126
Identities = 202/237 (85%), Positives = 225/237 (94%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
+N DE +DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKL
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 253
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
AVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT
Sbjct: 254 AVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTA 313
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTA 270
+A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKM++TFIGN+T+
Sbjct: 314 SAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTS 373
Query: 269 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 374 IQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 443 bits (1091), Expect = e-124
Identities = 198/237 (83%), Positives = 223/237 (94%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
+N DE +DNEALYDICFRTLKLT P++GDLNHL+SATMSGVT CLRFPGQLN+DLRKL
Sbjct: 210 ENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 269
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
AVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT
Sbjct: 270 AVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTA 329
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTA 270
+A+FRGRMS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP GL M++TF+GN+T+
Sbjct: 330 SAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTS 389
Query: 269 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 99
IQE+F+R+SEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 390 IQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQDATA 446
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 211 bits (515), Expect = 6e-55
Identities = 94/239 (39%), Positives = 147/239 (61%), Gaps = 8/239 (3%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
++TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D+ +
Sbjct: 196 EHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEF 255
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
N+VP+PR+HF + +AP+ S + LSVPE+T +F+ +MMA CDPRHG+Y+
Sbjct: 256 QTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMAC 315
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSA 294
++RG + K+V+ + I+ K + FV+W P K + PP ++ +
Sbjct: 316 CLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAV 375
Query: 293 TFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 117
I N TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 376 CMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 206 bits (503), Expect = 2e-53
Identities = 93/239 (38%), Positives = 145/239 (60%), Gaps = 8/239 (3%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
++TD +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ +
Sbjct: 196 EHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEF 255
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
N+VP+PR+HF + +AP+ S + LSV E+T F+ +MMA CDPRHG+Y+
Sbjct: 256 QTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMAC 315
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSA 294
++RG + K+V+ + I+ K + FV+W P K + PP ++ +
Sbjct: 316 CLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAV 375
Query: 293 TFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 117
I N+T++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 376 CMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 206 bits (502), Expect = 2e-53
Identities = 91/239 (38%), Positives = 147/239 (61%), Gaps = 8/239 (3%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
++TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D+ +
Sbjct: 277 EHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEF 336
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
N+VP+PR+HF + +AP+ S + SVPE+T +F+ ++MA CDPRHG+Y+
Sbjct: 337 QTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMAC 396
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG--------LKMSA 294
++RG + K+V+ + +I+ + + FV+W P K + PP ++ +
Sbjct: 397 CLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAV 456
Query: 293 TFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 117
I N TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 457 CMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 205 bits (500), Expect = 4e-53
Identities = 93/239 (38%), Positives = 145/239 (60%), Gaps = 8/239 (3%)
Frame = -3
Query: 809 KNTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKL 630
++TD +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ +
Sbjct: 196 EHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEF 255
Query: 629 AVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTV 450
N+VP+PR+HF + +AP+ S + LSV E+T F+ +MMA CDPRHG+Y+
Sbjct: 256 QTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMAC 315
Query: 449 AAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSA 294
++RG + K+V+ + I+ K + FV+W P K + PP ++ +
Sbjct: 316 CLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAV 375
Query: 293 TFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 117
I N+T++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 376 CMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 118 bits (285), Expect = 4e-27
Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 10/239 (4%)
Frame = -3
Query: 806 NTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLA 627
N D +DN AL I L L PT+ N LVS MS TT LR+PG +N DL L
Sbjct: 198 NADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLL 257
Query: 626 VNMVPFPRLHFFMPGFAPLT-SRGSQQYRALSVPELTQQMFDAKNMMAACDPRH-----G 465
+++P PR HF M G+ PLT R R +V ++ +++ KN+M + R+
Sbjct: 258 ASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQA 317
Query: 464 RYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 285
+Y+++ + +G + +V E + I+ + F+EW P +++S +
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEW------------GPASIQVSGLML 365
Query: 284 GNTTAIQELFKRISEQFTAMFRRKAFLHWYTG----EGMDEMEFTEAESNMNDLVSEYQ 120
N T+I+ LF + Q+ + +++AFL Y E D EF E+ + LV EY+
Sbjct: 366 ANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424
>03_06_0181 - 32180321-32180491,32180849-32181010
Length = 110
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 449 RRSDIYHGEGHRQPSCSWHQTFAASAPAQIE 541
R+ ++HGEG R+ S + +Q+F +SA Q++
Sbjct: 20 RQLQLFHGEGLRRLSPASYQSFCSSACGQVD 50
>02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117
Length = 386
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 559 PREVNGAKPGIKKCNLGNGTMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPYVG-- 732
PR N +PG+ + + NG F + + PG R V+ P +V + SP G
Sbjct: 192 PRRTNSVRPGVAENLVKNG-----DFEEGPYIIPGTRWGVLIPSMVVDE---HSPLPGWM 243
Query: 733 VVSFKVLKQI 762
V S K +K I
Sbjct: 244 VESLKAVKYI 253
>08_02_1008 - 23508377-23508541,23508940-23509116
Length = 113
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 180 HTLPRVPVQESFSSEHGCKLFRNSFKQLLDSCGV 281
H + RV +E S+ GC + + +LD CGV
Sbjct: 51 HDIERVRNKEQLSTRVGCGRVHSIIENILDKCGV 84
>05_01_0120 - 828834-831143
Length = 769
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 626 PLVSANRRSVVLGIASTWSHQTLSLKPNGSSPHTLGLLASKS 751
P +S + S I+S +S + SL P+ SSP +LGL + S
Sbjct: 502 PFLSPSSLSSDSSISSKYSSDSPSLSPSTSSPTSLGLSPASS 543
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 616 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPY 726
T +F K+ F C +TPD +TK+ KSP+
Sbjct: 213 TKTLGNFVKATFDCLMKTYGFLTPDFWRDTKFVKSPF 249
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +1
Query: 394 LSICSSTSFIDIRPRKTAA--TVRYLPWRGSQAAIMFLASNICCVSSGTDRARYCWLPRE 567
LS SF+ ++P + ++PW S++C V+ G+D A W ++
Sbjct: 332 LSGQKKVSFLPVKPHTKGIINNINFMPW-----------SDVCFVTGGSDHAVILWQEKD 380
Query: 568 VNGAKPGIKKCNLGNGTMLTASF-RKSAFSCPGNRKHVVTPDIVA 699
+ + K + M A +KS G+ K +++ D+ A
Sbjct: 381 DSWNHKKVHKDLHSSAVMGVAGLQQKSTILSVGSDKRIISFDLAA 425
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,994,338
Number of Sequences: 37544
Number of extensions: 545682
Number of successful extensions: 1472
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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