Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte15a14
         (858 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86958-1|BAA13194.2| 1593|Homo sapiens KIAA0203 protein.               31   5.4  
BC017556-1|AAH17556.1| 1594|Homo sapiens RB1-inducible coiled-co...    31   5.4  
AB059622-1|BAB69690.1| 1594|Homo sapiens Rb1-inducible coiled co...    31   5.4  
AK126633-1|BAC86622.1|  205|Homo sapiens protein ( Homo sapiens ...    31   7.1  
AB208949-1|BAD92186.1|  485|Homo sapiens Hypothetical protein DK...    30   9.4  

>D86958-1|BAA13194.2| 1593|Homo sapiens KIAA0203 protein.
          Length = 1593

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 23/73 (31%), Positives = 36/73 (49%)
 Frame = -3

Query: 496 LATGQHVRVLLAVIPIDAFTILHVPLQELLSRKFLLKRCVQRLENVKIHPKKQNVPICFA 317
           LA   HVR+         F +LH   Q+    + LL+  ++ LE VKI      VP  + 
Sbjct: 446 LANNLHVRLKWC-----CFVMLHAD-QDGEKLQALLRLVIELLERVKIVEALSTVPQMYC 499

Query: 316 LAIIQT*RKKLKI 278
           LA+++  R+K+ I
Sbjct: 500 LAVVEVVRRKMFI 512


>BC017556-1|AAH17556.1| 1594|Homo sapiens RB1-inducible coiled-coil
           1 protein.
          Length = 1594

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 23/73 (31%), Positives = 36/73 (49%)
 Frame = -3

Query: 496 LATGQHVRVLLAVIPIDAFTILHVPLQELLSRKFLLKRCVQRLENVKIHPKKQNVPICFA 317
           LA   HVR+         F +LH   Q+    + LL+  ++ LE VKI      VP  + 
Sbjct: 444 LANNLHVRLKWC-----CFVMLHAD-QDGEKLQALLRLVIELLERVKIVEALSTVPQMYC 497

Query: 316 LAIIQT*RKKLKI 278
           LA+++  R+K+ I
Sbjct: 498 LAVVEVVRRKMFI 510


>AB059622-1|BAB69690.1| 1594|Homo sapiens Rb1-inducible coiled coil
           protein protein.
          Length = 1594

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 23/73 (31%), Positives = 36/73 (49%)
 Frame = -3

Query: 496 LATGQHVRVLLAVIPIDAFTILHVPLQELLSRKFLLKRCVQRLENVKIHPKKQNVPICFA 317
           LA   HVR+         F +LH   Q+    + LL+  ++ LE VKI      VP  + 
Sbjct: 444 LANNLHVRLKWC-----CFVMLHAD-QDGEKLQALLRLVIELLERVKIVEALSTVPQMYC 497

Query: 316 LAIIQT*RKKLKI 278
           LA+++  R+K+ I
Sbjct: 498 LAVVEVVRRKMFI 510


>AK126633-1|BAC86622.1|  205|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44675 fis, clone BRACE3007869. ).
          Length = 205

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
 Frame = -2

Query: 605 EVTPRSSSVLQKPLAARSCHHLPHCMP---PSSCFPYLMPCYWPARAGAPCSHP 453
           ++ P  +S+L  P  A     LP   P   P+   P   P  WP R    C HP
Sbjct: 57  QLPPCPASLLHSPFHALHLPTLPQGCPFPLPALYPPQPFPALWPGRGAPLCCHP 110


>AB208949-1|BAD92186.1|  485|Homo sapiens Hypothetical protein
           DKFZp434D229 variant protein.
          Length = 485

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 18/48 (37%), Positives = 21/48 (43%)
 Frame = -2

Query: 620 EPSPVEVTPRSSSVLQKPLAARSCHHLPHCMPPSSCFPYLMPCYWPAR 477
           EP P    P  S  L  P +    H  PH +PP SCFP  +    P R
Sbjct: 7   EPHPGTFHPAPS--LLDPASLCPWHLPPHPVPPGSCFPVSLAPSTPPR 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,592,540
Number of Sequences: 237096
Number of extensions: 2800054
Number of successful extensions: 7411
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7408
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)