Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15a07
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical ... 149 2e-36
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 147 7e-36
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 147 7e-36
Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical p... 129 3e-30
Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical pr... 129 3e-30
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 127 8e-30
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 123 1e-28
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 123 1e-28
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 118 4e-27
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 117 9e-27
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 117 9e-27
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 114 8e-26
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 114 8e-26
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 109 2e-24
Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical pr... 95 4e-20
Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical p... 95 4e-20
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z81508-1|CAB04142.1| 331|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z68337-4|CAA92744.1| 364|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL117202-2|CAB55092.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr... 29 4.1
U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,... 29 5.4
U42839-8|AAC69016.1| 189|Caenorhabditis elegans Osmotic avoidan... 28 7.1
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 28 7.1
AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 28 7.1
AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 28 7.1
U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 28 9.4
U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical pr... 28 9.4
AF077542-10|AAC26297.1| 177|Caenorhabditis elegans Hypothetical... 28 9.4
AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical ... 28 9.4
>AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical
protein Y59C2A.1 protein.
Length = 454
Score = 149 bits (361), Expect = 2e-36
Identities = 84/231 (36%), Positives = 121/231 (52%), Gaps = 11/231 (4%)
Frame = -3
Query: 826 ISTAVVTYIADRLVRTFHEQPDCVTNK---DWYILPVLNPDGYEYTHTHDRMWRKNRARY 656
I+ AV ++ ++V + P N DWYI+P +NPDGYEY+ T DR+WRK R++
Sbjct: 212 IAPAVGLFMIRKIVEEYGRNPQVTANLQKFDWYIMPQVNPDGYEYSRTTDRLWRKTRSKN 271
Query: 655 GE----CVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRRLITKSST 488
CVG D NRN+ P + Y G P+SEPE L+ T T
Sbjct: 272 VTVNRWCVGADANRNWGYRWGEAGANRT---PCSNIYMGSHPYSEPEIRGLKEFFTWQIT 328
Query: 487 PFKVFLSFHSYGEVVIFPWGYTDEPCPDYVELLEGGTSIAKAIYETSGRTYKVGSTKDLM 308
V++S HSYG++++ PWGYT+E +Y + A+AI T+G +Y G+ ++M
Sbjct: 329 NPMVYISLHSYGQLLLSPWGYTNERTENYQDQQNAAKEAAQAIKNTTGVSYSYGTISEMM 388
Query: 307 YFACGNSIDWSYAVAGIPYSYMVELR----GKKHRFLLPQNEIESTAKEVM 167
Y A G SID+ G+PY Y VELR F LP + I +T E++
Sbjct: 389 YPASGTSIDFMQH-RGVPYIYGVELRPTDNPNSFAFNLPPSYIRATGDEML 438
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 147 bits (357), Expect = 7e-36
Identities = 93/241 (38%), Positives = 127/241 (52%), Gaps = 18/241 (7%)
Frame = -3
Query: 826 ISTAVVTYIADRLVRTFHEQPDC---VTNKDWYILPVLNPDGYEYTHTHDRMWRKNR--A 662
I+ A YIA L+ + + + D+YILPV+NPDGYEY+ +RMWRKNR A
Sbjct: 193 IAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYSREKNRMWRKNRSPA 252
Query: 661 RYGE-------CVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRRLI 503
+ C GVDLNRNF DP + Y G FSEPE+ A+R +
Sbjct: 253 KCARQTFSTVCCSGVDLNRNFDWFWASTGSSS---DPCHDTYHGSAAFSEPESQAVRDFL 309
Query: 502 TKSSTPFKVFLSFHSYGEVVIFPWGYTDEPCP-DY-VELLEGGTSIAKAIYETSGRTYKV 329
+ +TP + F+S HSY ++ + P+G+ + P DY L KA+YE G Y+V
Sbjct: 310 -EQNTP-EAFISLHSYSQMWLIPYGHRKQSYPQDYHTGLRPLALRATKALYELYGTKYQV 367
Query: 328 GSTKDLMYFACGNSIDWSYAVAGIPYSYMVELRGKK----HRFLLPQNEIESTAKEVMNG 161
G+ DLMY A G S DW+ +PY+Y++ELR K H FLLP+ EI T E
Sbjct: 368 GTGADLMYEASGGSHDWAKGQLKVPYAYLIELRPKNTMMGHGFLLPEREIVPTGLETFES 427
Query: 160 V 158
+
Sbjct: 428 I 428
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 147 bits (357), Expect = 7e-36
Identities = 93/241 (38%), Positives = 127/241 (52%), Gaps = 18/241 (7%)
Frame = -3
Query: 826 ISTAVVTYIADRLVRTFHEQPDC---VTNKDWYILPVLNPDGYEYTHTHDRMWRKNR--A 662
I+ A YIA L+ + + + D+YILPV+NPDGYEY+ +RMWRKNR A
Sbjct: 193 IAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYSREKNRMWRKNRSPA 252
Query: 661 RYGE-------CVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRRLI 503
+ C GVDLNRNF DP + Y G FSEPE+ A+R +
Sbjct: 253 KCARQTFSTVCCSGVDLNRNFDWFWASTGSSS---DPCHDTYHGSAAFSEPESQAVRDFL 309
Query: 502 TKSSTPFKVFLSFHSYGEVVIFPWGYTDEPCP-DY-VELLEGGTSIAKAIYETSGRTYKV 329
+ +TP + F+S HSY ++ + P+G+ + P DY L KA+YE G Y+V
Sbjct: 310 -EQNTP-EAFISLHSYSQMWLIPYGHRKQSYPQDYHTGLRPLALRATKALYELYGTKYQV 367
Query: 328 GSTKDLMYFACGNSIDWSYAVAGIPYSYMVELRGKK----HRFLLPQNEIESTAKEVMNG 161
G+ DLMY A G S DW+ +PY+Y++ELR K H FLLP+ EI T E
Sbjct: 368 GTGADLMYEASGGSHDWAKGQLKVPYAYLIELRPKNTMMGHGFLLPEREIVPTGLETFES 427
Query: 160 V 158
+
Sbjct: 428 I 428
>Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 129 bits (311), Expect = 3e-30
Identities = 74/223 (33%), Positives = 113/223 (50%), Gaps = 8/223 (3%)
Frame = -3
Query: 802 IADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEYTHTHDRMWRKNRARY--GECVGV 638
+A L+ T QP + + + ++P NPDGYEY+ T+DRMWRK R+R+ C G
Sbjct: 185 VALYLIYTIVSQPAYRNLLDSVQLVVVPNTNPDGYEYSRTNDRMWRKTRSRFTNSRCAGA 244
Query: 637 DLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRRLITKSSTPFKVFLSFHS 458
D NRN+ + G +P SEPE AL I + K +++ HS
Sbjct: 245 DANRNYPFYWGTQGVSHSQCSE---IFCGSRPQSEPEVLALTNAIIRDEERIKGYIALHS 301
Query: 457 YGEVVIFPWGYTDEPCP-DYVELLEGGTSIAKAIYETSGRTYKVGSTKDLMYFACGNSID 281
YG+ +++PWG+T P D +L++ G ++A AI + Y V ++ D +Y A G S D
Sbjct: 302 YGQEILYPWGHTQRTYPTDVQDLIQVGRAMASAIRAVNNTDYTVVNSGDGLYPAAGASDD 361
Query: 280 WSYAVAGIPYSYMVELR--GKKHRFLLPQNEIESTAKEVMNGV 158
W+ + GI YSY +EL F LP++ I +E +
Sbjct: 362 WAKS-RGIKYSYTIELSPIDDFTGFSLPEDRINQVCREAFQAI 403
>Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 129 bits (311), Expect = 3e-30
Identities = 74/223 (33%), Positives = 113/223 (50%), Gaps = 8/223 (3%)
Frame = -3
Query: 802 IADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEYTHTHDRMWRKNRARY--GECVGV 638
+A L+ T QP + + + ++P NPDGYEY+ T+DRMWRK R+R+ C G
Sbjct: 185 VALYLIYTIVSQPAYRNLLDSVQLVVVPNTNPDGYEYSRTNDRMWRKTRSRFTNSRCAGA 244
Query: 637 DLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRRLITKSSTPFKVFLSFHS 458
D NRN+ + G +P SEPE AL I + K +++ HS
Sbjct: 245 DANRNYPFYWGTQGVSHSQCSE---IFCGSRPQSEPEVLALTNAIIRDEERIKGYIALHS 301
Query: 457 YGEVVIFPWGYTDEPCP-DYVELLEGGTSIAKAIYETSGRTYKVGSTKDLMYFACGNSID 281
YG+ +++PWG+T P D +L++ G ++A AI + Y V ++ D +Y A G S D
Sbjct: 302 YGQEILYPWGHTQRTYPTDVQDLIQVGRAMASAIRAVNNTDYTVVNSGDGLYPAAGASDD 361
Query: 280 WSYAVAGIPYSYMVELR--GKKHRFLLPQNEIESTAKEVMNGV 158
W+ + GI YSY +EL F LP++ I +E +
Sbjct: 362 WAKS-RGIKYSYTIELSPIDDFTGFSLPEDRINQVCREAFQAI 403
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 127 bits (307), Expect = 8e-30
Identities = 85/249 (34%), Positives = 125/249 (50%), Gaps = 26/249 (10%)
Frame = -3
Query: 826 ISTAVVTYIADRLVRTFHEQPDC---VTNKDWYILPVLNPDGYEYTHTHD----RMWRKN 668
+S + V Y +LV + + V +WYI+P+LNPDGYEY+ + + R+WRKN
Sbjct: 189 VSPSTVLYFIHQLVTQYDKDVQIKQFVDQLEWYIVPLLNPDGYEYSRSSNDPEIRLWRKN 248
Query: 667 RA---------------RYGECVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSE 533
R+ C GVDLNRNF DP + Y+G FSE
Sbjct: 249 RSPPKCIQQATGLFQPPTTTCCQGVDLNRNFDWFFGQVGSST---DPCSEIYQGAYAFSE 305
Query: 532 PETAALRRLITKSSTPFKVFLSFHSYGEVVIFPWGYTDEPCP-DYVELLEGGTSIAKAIY 356
PETAA+R + + FL+FHSY +++++P+G+ D +L S A+A+
Sbjct: 306 PETAAVRDFVQRHR--ISTFLTFHSYSQILMYPFGHQVRTYSNDLNDLRSTALSAAQALN 363
Query: 355 ETSGRTYKVGSTKDLMYFACGNSIDWSYAVAGIPYSYMVELRGKKH---RFLLPQNEIES 185
YKVG+ D +Y A G S DW+ A + YS++ ELR ++ FLL +N+I
Sbjct: 364 SVYNTQYKVGTGADTLYPASGGSEDWAKGKAHVKYSFLFELRPEEQVWDGFLLAENQIIP 423
Query: 184 TAKEVMNGV 158
TA+E V
Sbjct: 424 TARETWEAV 432
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 123 bits (297), Expect = 1e-28
Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 20/213 (9%)
Frame = -3
Query: 736 ILPVLNPDGYEYTHT----HDRMWRKNRAR-------YGE---CVGVDLNRNFXXXXXXX 599
++P LNPDGYE+T + H R+WRKNR++ +G C GVDLNRNF
Sbjct: 222 VVPCLNPDGYEFTRSSTNPHVRLWRKNRSKMQCRKDIWGRNRCCRGVDLNRNFDFHFRES 281
Query: 598 XXXXXXEDPGNIFYRGPKPFSEPETAALRRLITKSSTPFKV--FLSFHSYGEVVIFPWGY 425
DP + Y+GP PFSEPE A+R + + +++ H+Y ++ I P+G+
Sbjct: 282 GTSD---DPCSEIYQGPSPFSEPEAKAVRDALLSQRYKGRTDAYITLHTYSQIWIHPYGH 338
Query: 424 TDEPCP-DYVELLEGGTSIAKAIYETSGRTYKVGSTKDLMYFACGNSIDWSYAVAGIPYS 248
+ P D +L E G A+A+ G Y VGS D +Y A G S DW+ A + +
Sbjct: 339 KKDAYPGDIKDLYEVGKKAAQALKRVYGTKYVVGSGADTLYPASGGSEDWAKHEAKVKFV 398
Query: 247 YMVELRGKKHR---FLLPQNEIESTAKEVMNGV 158
Y++ELR + F+L + E+ TA+E GV
Sbjct: 399 YLLELRPDEKNWDGFILDEKELIPTARETWEGV 431
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 123 bits (297), Expect = 1e-28
Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 20/213 (9%)
Frame = -3
Query: 736 ILPVLNPDGYEYTHT----HDRMWRKNRAR-------YGE---CVGVDLNRNFXXXXXXX 599
++P LNPDGYE+T + H R+WRKNR++ +G C GVDLNRNF
Sbjct: 222 VVPCLNPDGYEFTRSSTNPHVRLWRKNRSKMQCRKDIWGRNRCCRGVDLNRNFDFHFRES 281
Query: 598 XXXXXXEDPGNIFYRGPKPFSEPETAALRRLITKSSTPFKV--FLSFHSYGEVVIFPWGY 425
DP + Y+GP PFSEPE A+R + + +++ H+Y ++ I P+G+
Sbjct: 282 GTSD---DPCSEIYQGPSPFSEPEAKAVRDALLSQRYKGRTDAYITLHTYSQIWIHPYGH 338
Query: 424 TDEPCP-DYVELLEGGTSIAKAIYETSGRTYKVGSTKDLMYFACGNSIDWSYAVAGIPYS 248
+ P D +L E G A+A+ G Y VGS D +Y A G S DW+ A + +
Sbjct: 339 KKDAYPGDIKDLYEVGKKAAQALKRVYGTKYVVGSGADTLYPASGGSEDWAKHEAKVKFV 398
Query: 247 YMVELRGKKHR---FLLPQNEIESTAKEVMNGV 158
Y++ELR + F+L + E+ TA+E GV
Sbjct: 399 YLLELRPDEKNWDGFILDEKELIPTARETWEGV 431
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 118 bits (285), Expect = 4e-27
Identities = 81/252 (32%), Positives = 123/252 (48%), Gaps = 23/252 (9%)
Frame = -3
Query: 823 STAVVTYIADRLVRTFHEQPDC---VTNKDWYILPVLNPDGYEYTHTHD----RMWRKNR 665
S+ Y ++LV + + V D+YI+P LNPDGYEYT T R+WRKNR
Sbjct: 225 SSHTALYFINQLVSEYGKDAQITNYVDTLDFYIVPCLNPDGYEYTRTSPIPTVRLWRKNR 284
Query: 664 ARY--------GE--CVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAAL 515
+ GE C GVDLNRNF +P + Y G + FSEPET A+
Sbjct: 285 SPELCRPSLWGGEKCCRGVDLNRNF---RFHWAERGSSYEPCSNIYHGEEVFSEPETRAV 341
Query: 514 RRLITKSSTPFKV--FLSFHSYGEVVIFPWGYTDEPCP-DYVELLEGGTSIAKAIYETSG 344
R + +V F++ HSY ++ I+P+ + ++ P D EL + + G
Sbjct: 342 RNFLATPEMKDRVDAFVTLHSYAQLWIYPYSHEEQNYPEDIGELRKTARKAINRLSRVYG 401
Query: 343 RTYKVGSTKDLMYFACGNSIDWSYAVAGIPYSYMVELRGK---KHRFLLPQNEIESTAKE 173
Y++G+ D + A G S DW+ + + Y Y++ELR + + F+L + E+ TA E
Sbjct: 402 TNYRMGTGADTLSPAAGGSDDWAKSALNVKYVYLIELRPQMELSNGFILHKKELIPTAVE 461
Query: 172 VMNGVFRLLDFV 137
G ++D V
Sbjct: 462 TFEGFREVVDAV 473
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 117 bits (282), Expect = 9e-27
Identities = 80/245 (32%), Positives = 116/245 (47%), Gaps = 21/245 (8%)
Frame = -3
Query: 808 TYIADRLVRTFHEQPDCVTNKD---WYILPVLNPDGYEYTHTHD-----RMWRKNRA--- 662
+Y + +V E P D YI+PVLNPDGYEYT T RMWRK+R+
Sbjct: 164 SYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYTRTDKTNPRARMWRKSRSPKA 223
Query: 661 ------RYGECVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRRLIT 500
R C+GVDLNRNF P + Y GP FSEPE+ A + +T
Sbjct: 224 CAFDGVRNSCCMGVDLNRNFDFRFSEIGASRY---PCSEIYHGPSAFSEPESKAYSQFLT 280
Query: 499 KSSTPFKVFLSFHSYGEVVIFPWGYTD-EPCPDYVELLEGGTSIAKAIYETSGRTYKVGS 323
+ +++ HSY ++ I+ + + PD E + + G Y+ G+
Sbjct: 281 SLKGRLEAYITLHSYSQLWIYSYSHRKFTYAPDIEETRRVAAKAVQELGRMYGTKYRHGT 340
Query: 322 TKDLMYFACGNSIDWSYAVAGIPYSYMVELR---GKKHRFLLPQNEIESTAKEVMNGVFR 152
+++Y G S DW+ I YSY +ELR + + F+L +N++ TAKE GV
Sbjct: 341 GPEIIYAFSGGSTDWAKETLKIKYSYTIELRPGYEEWNGFVLDKNQLIPTAKETWAGVTV 400
Query: 151 LLDFV 137
+LD V
Sbjct: 401 VLDEV 405
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 117 bits (282), Expect = 9e-27
Identities = 80/245 (32%), Positives = 116/245 (47%), Gaps = 21/245 (8%)
Frame = -3
Query: 808 TYIADRLVRTFHEQPDCVTNKD---WYILPVLNPDGYEYTHTHD-----RMWRKNRA--- 662
+Y + +V E P D YI+PVLNPDGYEYT T RMWRK+R+
Sbjct: 164 SYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYTRTDKTNPRARMWRKSRSPKA 223
Query: 661 ------RYGECVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRRLIT 500
R C+GVDLNRNF P + Y GP FSEPE+ A + +T
Sbjct: 224 CAFDGVRNSCCMGVDLNRNFDFRFSEIGASRY---PCSEIYHGPSAFSEPESKAYSQFLT 280
Query: 499 KSSTPFKVFLSFHSYGEVVIFPWGYTD-EPCPDYVELLEGGTSIAKAIYETSGRTYKVGS 323
+ +++ HSY ++ I+ + + PD E + + G Y+ G+
Sbjct: 281 SLKGRLEAYITLHSYSQLWIYSYSHRKFTYAPDIEETRRVAAKAVQELGRMYGTKYRHGT 340
Query: 322 TKDLMYFACGNSIDWSYAVAGIPYSYMVELR---GKKHRFLLPQNEIESTAKEVMNGVFR 152
+++Y G S DW+ I YSY +ELR + + F+L +N++ TAKE GV
Sbjct: 341 GPEIIYAFSGGSTDWAKETLKIKYSYTIELRPGYEEWNGFVLDKNQLIPTAKETWAGVTV 400
Query: 151 LLDFV 137
+LD V
Sbjct: 401 VLDEV 405
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 114 bits (274), Expect = 8e-26
Identities = 81/247 (32%), Positives = 122/247 (49%), Gaps = 31/247 (12%)
Frame = -3
Query: 805 YIADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEYTHTHD----RMWRKNRA----- 662
+ DRL+ +++ V ++YILPV NPDGYEY+ + R+WRKNRA
Sbjct: 212 WFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYEYSRSDVSPMIRLWRKNRAGVVCK 271
Query: 661 -----RYGECVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRRLITK 497
R C GVDLNRN+ D + Y+G FSE ET ++R +T
Sbjct: 272 KDRWFRDRCCGGVDLNRNYDWHFGETGSST---DKCSEIYQGSSAFSESETRSMRDFLTS 328
Query: 496 SSTPFKV--FLSFHSYGEVVIFPWGYTDEPCP-DYVELL--------EGGTSIAKAIYET 350
S K+ F++ H+Y ++ I P+ + + P D EL+ G + A+ T
Sbjct: 329 SELNGKIDAFITLHTYSQMWIHPYSHARKSVPADVAELVCVDENNVQRVGRAAVAALENT 388
Query: 349 SGRTYKVGSTKDLMYFACGNSIDWSYAVAGIPYSYMVELRGKK---HRFLLPQNEIESTA 179
G YK G+ D++Y + G S DW+ I Y Y++ELR + F+L Q+++ TA
Sbjct: 389 YGTKYKFGTGSDILYPSAGGSDDWAKGTLRIKYVYLLELRPGEDVWDGFILDQHQLIPTA 448
Query: 178 KEVMNGV 158
KE NG+
Sbjct: 449 KETWNGI 455
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 114 bits (274), Expect = 8e-26
Identities = 81/247 (32%), Positives = 122/247 (49%), Gaps = 31/247 (12%)
Frame = -3
Query: 805 YIADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEYTHTHD----RMWRKNRA----- 662
+ DRL+ +++ V ++YILPV NPDGYEY+ + R+WRKNRA
Sbjct: 212 WFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYEYSRSDVSPMIRLWRKNRAGVVCK 271
Query: 661 -----RYGECVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRRLITK 497
R C GVDLNRN+ D + Y+G FSE ET ++R +T
Sbjct: 272 KDRWFRDRCCGGVDLNRNYDWHFGETGSST---DKCSEIYQGSSAFSESETRSMRDFLTS 328
Query: 496 SSTPFKV--FLSFHSYGEVVIFPWGYTDEPCP-DYVELL--------EGGTSIAKAIYET 350
S K+ F++ H+Y ++ I P+ + + P D EL+ G + A+ T
Sbjct: 329 SELNGKIDAFITLHTYSQMWIHPYSHARKSVPADVAELVCVDENNVQRVGRAAVAALENT 388
Query: 349 SGRTYKVGSTKDLMYFACGNSIDWSYAVAGIPYSYMVELRGKK---HRFLLPQNEIESTA 179
G YK G+ D++Y + G S DW+ I Y Y++ELR + F+L Q+++ TA
Sbjct: 389 YGTKYKFGTGSDILYPSAGGSDDWAKGTLRIKYVYLLELRPGEDVWDGFILDQHQLIPTA 448
Query: 178 KEVMNGV 158
KE NG+
Sbjct: 449 KETWNGI 455
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 109 bits (263), Expect = 2e-24
Identities = 80/245 (32%), Positives = 116/245 (47%), Gaps = 21/245 (8%)
Frame = -3
Query: 808 TYIADRLVRTFHEQPDCVTNKD---WYILPVLNPDGYEYTHTHD-----RMWRKNRA--- 662
+Y + +V E P D YI+PVLNPDGYEYT T RMWRK+R+
Sbjct: 164 SYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEYTRTDKTNPRARMWRKSRSPKA 223
Query: 661 ------RYGECVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRRLIT 500
R C+GVDLNRNF P + Y GP FSEPE+ A + +T
Sbjct: 224 CAFDGVRNSCCMGVDLNRNFDFRFSEIGASRY---PCSEIYHGPSAFSEPESKAYSQFLT 280
Query: 499 KSSTPFKVFLSFHSYGEVVIFPWGYTD-EPCPDYVELLEGGTSIAKAIYETSGRTYKVGS 323
+ +++ HSY ++ I+ + + PD E + + G Y+ G+
Sbjct: 281 SLKGRLEAYITLHSYSQLWIYSYSHRKFTYAPDIEETRRVAAKAVQELGRMYGTKYRHGT 340
Query: 322 TKDLMYFACGNSIDWSYAVAGIPYSYMVELR---GKKHRFLLPQNEIESTAKEVMNGVFR 152
+++ CG S DW+ I YSY +ELR + + F+L +N++ TAKE GV
Sbjct: 341 GPEII---CG-STDWAKETLKIKYSYTIELRPGYEEWNGFVLDKNQLIPTAKETWAGVTV 396
Query: 151 LLDFV 137
+LD V
Sbjct: 397 VLDEV 401
>Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 95.5 bits (227), Expect = 4e-20
Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Frame = -3
Query: 814 VVTYIADRLVRTFHEQPDC---VTNKDWYILPVLNPDGYEYTHTHDR----MWRKNRARY 656
V Y ++LV + V D Y+ PVLNPDG+ Y+ T R WRKNRA
Sbjct: 104 VAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYSRTSTRAMIRQWRKNRAPE 163
Query: 655 GE-----------CVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRR 509
C GVDLNRN+ +P + ++GP+PFSEPET A+R
Sbjct: 164 NCTGTGPFQTDICCEGVDLNRNYDIGFSHKNYPFN--NPCSDEFQGPRPFSEPETRAVRD 221
Query: 508 LITKSSTPFKVF--LSFHSYGEVVIFPWGYTDEPCPDYVELLE-GGTSIAKAIYETSGRT 338
I S +++ +S H++G++ I P+ Y P ++ LE A ++
Sbjct: 222 FIMSSEIYGRLYALVSMHTHGQLWILPYNYQKRTYPQDIKDLEILANRAADRVFAYRETK 281
Query: 337 YKVGSTKDLMYFACGNSIDWSYAVAGIPYSYMVEL 233
Y+VG+ D++ A G + DW Y Y++EL
Sbjct: 282 YRVGTAADMLGTATGGATDWIKKNTPTKYVYVLEL 316
>Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 95.5 bits (227), Expect = 4e-20
Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Frame = -3
Query: 814 VVTYIADRLVRTFHEQPDC---VTNKDWYILPVLNPDGYEYTHTHDR----MWRKNRARY 656
V Y ++LV + V D Y+ PVLNPDG+ Y+ T R WRKNRA
Sbjct: 104 VAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYSRTSTRAMIRQWRKNRAPE 163
Query: 655 GE-----------CVGVDLNRNFXXXXXXXXXXXXXEDPGNIFYRGPKPFSEPETAALRR 509
C GVDLNRN+ +P + ++GP+PFSEPET A+R
Sbjct: 164 NCTGTGPFQTDICCEGVDLNRNYDIGFSHKNYPFN--NPCSDEFQGPRPFSEPETRAVRD 221
Query: 508 LITKSSTPFKVF--LSFHSYGEVVIFPWGYTDEPCPDYVELLE-GGTSIAKAIYETSGRT 338
I S +++ +S H++G++ I P+ Y P ++ LE A ++
Sbjct: 222 FIMSSEIYGRLYALVSMHTHGQLWILPYNYQKRTYPQDIKDLEILANRAADRVFAYRETK 281
Query: 337 YKVGSTKDLMYFACGNSIDWSYAVAGIPYSYMVEL 233
Y+VG+ D++ A G + DW Y Y++EL
Sbjct: 282 YRVGTAADMLGTATGGATDWIKKNTPTKYVYVLEL 316
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 826 ISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEYTHTHDRMWRKNRARY 656
+ V Y+A+ L + + D V N +++P +NPDGYE DR+ RA
Sbjct: 144 VGREAVLYLAEILCLNYGKNKYLTDLVNNARIHLMPSMNPDGYEKGFPGDRISAMGRANA 203
Query: 655 GECVGVDLNRNF 620
+ VDLNRNF
Sbjct: 204 ND---VDLNRNF 212
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -3
Query: 739 YILPVLNPDGYEY---THTHDRMWRKNRARYGECVGVDLNRNF 620
+ILP +NPDG+E T R W R+ GVDLNR+F
Sbjct: 139 HILPSMNPDGFELALGTEPAQRQWLTGRSNIN---GVDLNRDF 178
>Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical
protein T27A8.1 protein.
Length = 492
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 739 YILPVLNPDGYEYTHTHDRMWRKNRARYGECVGVDLNRNF 620
+++P +NPDGYE+ D+ R G DLNRNF
Sbjct: 156 HLMPSMNPDGYEHASEGDQAGVTGRQNAN---GKDLNRNF 192
>Z81508-1|CAB04142.1| 331|Caenorhabditis elegans Hypothetical
protein F20E11.1 protein.
Length = 331
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +2
Query: 317 LRTAYFICAS---ACFIYCLCNRSASFQQLYIIRTW--FICVPPWEYNDFAV 457
++ YF+ + +CF++ + R+A+FQ ++ TW F + W ND V
Sbjct: 150 IKHLYFVIIAKDFSCFVFTVWKRNAAFQTVFQNLTWVDFFFLMTWCINDIIV 201
>Z68337-4|CAA92744.1| 364|Caenorhabditis elegans Hypothetical
protein M7.7 protein.
Length = 364
Score = 29.5 bits (63), Expect = 3.1
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -3
Query: 475 FLSFHSYGEVVIFPWGYTDEPCPDYVELLEGGTSIAKAIYETS-GRTYKVGSTKDLMYFA 299
FL FH YG + F W E C + + L T + + TS YK +M+
Sbjct: 86 FLRFHGYGGIDGFRW-LAMERCGENLSDLRKDTPLGRFSVTTSLFIFYKFIEALQMMH-- 142
Query: 298 CGNSIDWSYAVAGIPYSYMVELRGKKHRFLL 206
SI W + P + V+L+ ++H +LL
Sbjct: 143 ---SIGWLHRDVK-PANVCVDLKSRRHLYLL 169
>AL117202-2|CAB55092.1| 302|Caenorhabditis elegans Hypothetical
protein Y47D3A.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 391 LEGGTSIAKAIYETSGRTYKVGSTKDLMYFACGNSID 281
+E TS+ ++ + SG Y + K L YF C NS+D
Sbjct: 1 MEPSTSVNQSGNQESGTQYPSTTPKLLRYFICMNSVD 37
>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical
protein F26H9.8 protein.
Length = 1377
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 474 FYRFIATAKSLYSHGGTQMNHVLIM*SCWKEALL 373
FYRF+A K L++ G+ NH ++ + ++ LL
Sbjct: 890 FYRFVANEKLLFNEDGSMENHSVVFSNLPQKQLL 923
>Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical
protein F26H9.8 protein.
Length = 1377
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 474 FYRFIATAKSLYSHGGTQMNHVLIM*SCWKEALL 373
FYRF+A K L++ G+ NH ++ + ++ LL
Sbjct: 890 FYRFVANEKLLFNEDGSMENHSVVFSNLPQKQLL 923
>U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,
class iii (c) protein1 protein.
Length = 1400
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 190 RFRFEAAGICVSSLSIQPYTNKVCPQQRNSNL 285
R R +C+ S+S T+KVCPQ R +
Sbjct: 1149 RIRLLQLEVCMESISYAIATSKVCPQMRGCKI 1180
>U42839-8|AAC69016.1| 189|Caenorhabditis elegans Osmotic avoidance
abnormal protein11 protein.
Length = 189
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 667 CSYATFCRACACIHNHPDSVLEVCTNPY*LHNQAAHERSGRVYQQCT 807
C+ A C C H HP V ++C P + A E R Y +CT
Sbjct: 140 CTAAHCTDECKCAHTHP-KVHQMCNPP---SSAAMAETCQRWYSKCT 182
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 709 NHPDSVLEVCTNPY*LHNQAAHERSGRVYQQ 801
+H D V PY HNQ+ E SGR ++Q
Sbjct: 353 DHEDIHKRVEIKPYFFHNQSCEECSGRYHRQ 383
>AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoformb protein.
Length = 1420
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 262 GIPYSYMVELRGKKHRFLLPQNEIESTAKEVMNGVFRLL 146
G P +VEL+ K HRF+L N + KE +F LL
Sbjct: 679 GSPKKPLVELKAK-HRFMLELNSLTREVKERELRIFSLL 716
>AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoforma protein.
Length = 1418
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 262 GIPYSYMVELRGKKHRFLLPQNEIESTAKEVMNGVFRLL 146
G P +VEL+ K HRF+L N + KE +F LL
Sbjct: 679 GSPKKPLVELKAK-HRFMLELNSLTREVKERELRIFSLL 716
>U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical
protein C56E6.5 protein.
Length = 595
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 166 SLLLWRLTRFRFEAAGICVSSLSIQP-YTNKVCPQQRNSNLYCCRTQNT*DPSYCLLYMC 342
SL W+L F + + + ++ I P Y+ R NLYC T T + L+Y C
Sbjct: 369 SLFFWKLLTFLY----LLLQTIVIFPNYSKTSLLSFRECNLYCQTTSLTIFSIFFLVYSC 424
Query: 343 VR 348
++
Sbjct: 425 IQ 426
>U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical
protein C09B8.4 protein.
Length = 289
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -3
Query: 826 ISTAVVTYIADRLVRTFHEQPDCVTNKDWY----ILPVLNPDGYEYTHTHDRMWRKNRAR 659
+ST VTY+ D + +E + V +K +LP L P + Y + HD++ R
Sbjct: 169 LSTPSVTYMKDETRQKIYELVNAVRDKLLSPLVTLLPFLRPYFFSYWYIHDKIELPKRQV 228
Query: 658 Y 656
Y
Sbjct: 229 Y 229
>AF077542-10|AAC26297.1| 177|Caenorhabditis elegans Hypothetical
protein Y57G7A.2 protein.
Length = 177
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 58 LIYHSFI*AEYIISNSHTTGNFYFSRQQN 144
+++ + AE+++ N+HTT N + +QQN
Sbjct: 9 MLHDEQVFAEFMVPNAHTTPNLWRIQQQN 37
>AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical
protein Y37B11A.2 protein.
Length = 1133
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 175 LWRLTRFRFEAAGICVSSL--SIQPYTNKVCPQQRN 276
LWR + R +A GI + + S +P + +CPQ+R+
Sbjct: 79 LWREEKERCDALGIELKDVFNSYEPRKSTICPQERD 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,136,764
Number of Sequences: 27780
Number of extensions: 425792
Number of successful extensions: 1147
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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