Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte15a04
(810 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X58286-5|CAA41224.2| 83|Drosophila melanogaster mex1 protein p... 31 2.5
M63626-1|AAA28685.1| 83|Drosophila melanogaster mex1 protein. 31 2.5
AY071615-1|AAL49237.1| 83|Drosophila melanogaster RE66244p pro... 31 2.5
AE014296-2520|AAF49628.1| 83|Drosophila melanogaster CG7936-PA... 31 2.5
AY058371-1|AAL13600.1| 321|Drosophila melanogaster GH13914p pro... 30 4.3
AM294049-1|CAL25953.1| 321|Drosophila melanogaster CG7251 protein. 30 4.3
AM294048-1|CAL25952.1| 321|Drosophila melanogaster CG7251 protein. 30 4.3
AM294047-1|CAL25951.1| 321|Drosophila melanogaster CG7251 protein. 30 4.3
AM294046-1|CAL25950.1| 321|Drosophila melanogaster CG7251 protein. 30 4.3
AM294045-1|CAL25949.1| 321|Drosophila melanogaster CG7251 protein. 30 4.3
AM294044-1|CAL25948.1| 321|Drosophila melanogaster CG7251 protein. 30 4.3
AM294043-1|CAL25947.1| 321|Drosophila melanogaster CG7251 protein. 30 4.3
AM294042-1|CAL25946.1| 321|Drosophila melanogaster CG7251 protein. 30 4.3
AM294040-1|CAL25944.1| 313|Drosophila melanogaster CG7251 protein. 30 4.3
AE014134-948|AAF52271.1| 321|Drosophila melanogaster CG7251-PA ... 30 4.3
BT023931-1|ABB36435.1| 1135|Drosophila melanogaster RE58741p pro... 29 7.5
AE014297-1441|AAF54739.2| 1111|Drosophila melanogaster CG3532-PA... 29 7.5
AE014296-3399|AAF51628.1| 1088|Drosophila melanogaster CG13251-P... 29 7.5
BT025148-1|ABE73318.1| 270|Drosophila melanogaster IP04354p pro... 25 9.3
>X58286-5|CAA41224.2| 83|Drosophila melanogaster mex1 protein
protein.
Length = 83
Score = 30.7 bits (66), Expect = 2.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 603 CNALLSCATLRSRSAMCCCVCFC 671
CNAL C + CCC C C
Sbjct: 2 CNALCECLKCPGKVVCCCCSCAC 24
>M63626-1|AAA28685.1| 83|Drosophila melanogaster mex1 protein.
Length = 83
Score = 30.7 bits (66), Expect = 2.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 603 CNALLSCATLRSRSAMCCCVCFC 671
CNAL C + CCC C C
Sbjct: 2 CNALCECLKCPGKVVCCCCSCAC 24
>AY071615-1|AAL49237.1| 83|Drosophila melanogaster RE66244p
protein.
Length = 83
Score = 30.7 bits (66), Expect = 2.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 603 CNALLSCATLRSRSAMCCCVCFC 671
CNAL C + CCC C C
Sbjct: 2 CNALCECLKCPGKVVCCCCSCAC 24
>AE014296-2520|AAF49628.1| 83|Drosophila melanogaster CG7936-PA
protein.
Length = 83
Score = 30.7 bits (66), Expect = 2.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 603 CNALLSCATLRSRSAMCCCVCFC 671
CNAL C + CCC C C
Sbjct: 2 CNALCECLKCPGKVVCCCCSCAC 24
>AY058371-1|AAL13600.1| 321|Drosophila melanogaster GH13914p
protein.
Length = 321
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -3
Query: 793 LDAQELSFLHLKICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQER 614
L +QE S +L C+ K+ E A+Q + + +LL KQ+ ++ + ++ +ER
Sbjct: 90 LSSQESSLNYLSHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEE-QEFKQQRTEER 148
Query: 613 RAL 605
+ L
Sbjct: 149 KQL 151
>AM294049-1|CAL25953.1| 321|Drosophila melanogaster CG7251 protein.
Length = 321
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -3
Query: 793 LDAQELSFLHLKICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQER 614
L +QE S +L C+ K+ E A+Q + + +LL KQ+ ++ + ++ +ER
Sbjct: 90 LSSQESSLNYLSHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEE-QEFKQQRTEER 148
Query: 613 RAL 605
+ L
Sbjct: 149 KQL 151
>AM294048-1|CAL25952.1| 321|Drosophila melanogaster CG7251 protein.
Length = 321
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -3
Query: 793 LDAQELSFLHLKICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQER 614
L +QE S +L C+ K+ E A+Q + + +LL KQ+ ++ + ++ +ER
Sbjct: 90 LSSQESSLNYLSHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEE-QEFKQQRTEER 148
Query: 613 RAL 605
+ L
Sbjct: 149 KQL 151
>AM294047-1|CAL25951.1| 321|Drosophila melanogaster CG7251 protein.
Length = 321
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -3
Query: 793 LDAQELSFLHLKICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQER 614
L +QE S +L C+ K+ E A+Q + + +LL KQ+ ++ + ++ +ER
Sbjct: 90 LSSQESSLNYLSHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEE-QEFKQQRTEER 148
Query: 613 RAL 605
+ L
Sbjct: 149 KQL 151
>AM294046-1|CAL25950.1| 321|Drosophila melanogaster CG7251 protein.
Length = 321
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -3
Query: 793 LDAQELSFLHLKICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQER 614
L +QE S +L C+ K+ E A+Q + + +LL KQ+ ++ + ++ +ER
Sbjct: 90 LSSQESSLNYLSHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEE-QEFKQQRTEER 148
Query: 613 RAL 605
+ L
Sbjct: 149 KQL 151
>AM294045-1|CAL25949.1| 321|Drosophila melanogaster CG7251 protein.
Length = 321
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -3
Query: 793 LDAQELSFLHLKICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQER 614
L +QE S +L C+ K+ E A+Q + + +LL KQ+ ++ + ++ +ER
Sbjct: 90 LSSQESSLNYLSHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEE-QEFKQQRTEER 148
Query: 613 RAL 605
+ L
Sbjct: 149 KQL 151
>AM294044-1|CAL25948.1| 321|Drosophila melanogaster CG7251 protein.
Length = 321
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -3
Query: 793 LDAQELSFLHLKICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQER 614
L +QE S +L C+ K+ E A+Q + + +LL KQ+ ++ + ++ +ER
Sbjct: 90 LSSQESSLNYLSHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEE-QEFKQQRTEER 148
Query: 613 RAL 605
+ L
Sbjct: 149 KQL 151
>AM294043-1|CAL25947.1| 321|Drosophila melanogaster CG7251 protein.
Length = 321
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -3
Query: 793 LDAQELSFLHLKICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQER 614
L +QE S +L C+ K+ E A+Q + + +LL KQ+ ++ + ++ +ER
Sbjct: 90 LSSQESSLNYLSHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEE-QEFKQQRTEER 148
Query: 613 RAL 605
+ L
Sbjct: 149 KQL 151
>AM294042-1|CAL25946.1| 321|Drosophila melanogaster CG7251 protein.
Length = 321
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -3
Query: 793 LDAQELSFLHLKICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQER 614
L +QE S +L C+ K+ E A+Q + + +LL KQ+ ++ + ++ +ER
Sbjct: 90 LSSQESSLNYLSHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEE-QEFKQQRTEER 148
Query: 613 RAL 605
+ L
Sbjct: 149 KQL 151
>AM294040-1|CAL25944.1| 313|Drosophila melanogaster CG7251 protein.
Length = 313
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -3
Query: 793 LDAQELSFLHLKICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQER 614
L +QE S +L C+ K+ E A+Q + + +LL KQ+ ++ + ++ +ER
Sbjct: 90 LSSQESSLNYLSHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEE-QEFKQQRTEER 148
Query: 613 RAL 605
+ L
Sbjct: 149 KQL 151
>AE014134-948|AAF52271.1| 321|Drosophila melanogaster CG7251-PA
protein.
Length = 321
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -3
Query: 793 LDAQELSFLHLKICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQER 614
L +QE S +L C+ K+ E A+Q + + +LL KQ+ ++ + ++ +ER
Sbjct: 90 LSSQESSLNYLSHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEE-QEFKQQRTEER 148
Query: 613 RAL 605
+ L
Sbjct: 149 KQL 151
>BT023931-1|ABB36435.1| 1135|Drosophila melanogaster RE58741p
protein.
Length = 1135
Score = 29.1 bits (62), Expect = 7.5
Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = -3
Query: 721 EAFQMKINTLESELLTKQKHTQQHIAD---LDRKVAQERRALQEIR 593
+ ++ K+NT +LL++ + + H+A+ L+ + RAL+++R
Sbjct: 705 QQYESKLNTATQQLLSQTQELEMHLAEQKRLETALRNAERALEDLR 750
>AE014297-1441|AAF54739.2| 1111|Drosophila melanogaster CG3532-PA
protein.
Length = 1111
Score = 29.1 bits (62), Expect = 7.5
Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = -3
Query: 721 EAFQMKINTLESELLTKQKHTQQHIAD---LDRKVAQERRALQEIR 593
+ ++ K+NT +LL++ + + H+A+ L+ + RAL+++R
Sbjct: 705 QQYESKLNTATQQLLSQTQELEMHLAEQKRLETALRNAERALEDLR 750
>AE014296-3399|AAF51628.1| 1088|Drosophila melanogaster CG13251-PA
protein.
Length = 1088
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = -3
Query: 760 KICRTWKMKLNKEEAFQMKINTLESELLTKQKHTQQHIADLDRKVAQERRALQEIREAV 584
++ R W+ + +++E +E E + +QK +Q + +R+ QER Q+ ++ V
Sbjct: 501 ELIRKWEHERHRQE------EQIEEERIRRQKQLEQERLEFERRTLQEREEAQQKKQQV 553
>BT025148-1|ABE73318.1| 270|Drosophila melanogaster IP04354p
protein.
Length = 270
Score = 25.0 bits (52), Expect(2) = 9.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 651 CCCVCFCLVNSSDSNVLIFIWKAS 722
CCC C C D L+F W A+
Sbjct: 21 CCCCCSCCCRCFDVLRLLF-WSAA 43
Score = 22.2 bits (45), Expect(2) = 9.3
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = +3
Query: 642 SAMCCCVCFC 671
S CCC C C
Sbjct: 7 SCCCCCYCCC 16
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,115,943
Number of Sequences: 53049
Number of extensions: 622884
Number of successful extensions: 2026
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2001
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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