Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14p19
(755 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 26 0.44
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 25 1.0
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 24 1.8
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 4.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 4.1
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 4.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 4.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.4
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 5.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 7.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 7.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 7.1
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 9.4
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 25.8 bits (54), Expect = 0.44
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 714 YGPSTNLNLMKSAYGNEVFS 655
YGP N+NL+K+ G +F+
Sbjct: 30 YGPEANVNLLKNRTGRYMFT 49
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 24.6 bits (51), Expect = 1.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 720 PGYGPSTNLNLMKSAYGNEVFSD 652
PG +TN N MK+ + N +F++
Sbjct: 71 PGTSSATNPNAMKTIFKNTIFTN 93
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 23.8 bits (49), Expect = 1.8
Identities = 6/31 (19%), Positives = 19/31 (61%)
Frame = +1
Query: 640 SVRRIRENFVSVCRLHQIQICRRSVSWYRVD 732
+V + + +++ R H++++C +++ Y D
Sbjct: 450 AVYQTKVGLITILRNHKVEVCEKTIIPYEFD 480
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 142 NDFISSSFMHYNSTYCQNNQNN 207
N++ S++ +YN+ Y N NN
Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNN 108
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 142 NDFISSSFMHYNSTYCQNNQNN 207
N++ S++ +YN+ Y N NN
Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNN 108
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 151 ISSSFMHYNSTYCQNNQNN 207
+S+ +H N+ Y NN NN
Sbjct: 85 LSNKTIHNNNNYNNNNYNN 103
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 151 ISSSFMHYNSTYCQNNQNN 207
+S+ +H N+ Y NN NN
Sbjct: 85 LSNKTIHNNNNYNNNNYNN 103
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 151 ISSSFMHYNSTYCQNNQNN 207
+S+ +H N+ Y NN NN
Sbjct: 318 LSNKTIHNNNNYNNNNYNN 336
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 5.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -1
Query: 521 FSRIFTKDSVNLMLKSGVLLPFWCGRSGMDLSFRKS*FQPHSGFICSSNQ 372
++R F S+N +S + LPF S D R + Q + F+ + Q
Sbjct: 243 YTRSFAHQSINKEARSNLYLPFHLTLSFRDFRDRTTEQQHKAMFLVVTAQ 292
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.2 bits (45), Expect = 5.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -1
Query: 521 FSRIFTKDSVNLMLKSGVLLPFWCGRSGMDLSFRKS*FQPHSGFICSSNQ 372
++R F S+N +S + LPF S D R + Q + F+ + Q
Sbjct: 238 YTRSFAHQSINKEARSNLYLPFHLTLSFRDFRDRTTEQQHKAMFLVVTAQ 287
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 315 IQCPREVSWRH*YYKVRCILI 377
I CP +VSWR Y ++ LI
Sbjct: 244 ITCPIKVSWRGNYSCLKVDLI 264
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 315 IQCPREVSWRH*YYKVRCILI 377
I CP +VSWR Y ++ LI
Sbjct: 295 ITCPIKVSWRGNYSCLKVDLI 315
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 315 IQCPREVSWRH*YYKVRCILI 377
I CP +VSWR Y ++ LI
Sbjct: 244 ITCPIKVSWRGNYSCLKVDLI 264
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -1
Query: 560 IQLVVGTCQRAIGFSRIFTKDSVNLM 483
+QL+V +R GF + +D + L+
Sbjct: 386 VQLIVEFSKRLPGFDELMREDQIALL 411
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,770
Number of Sequences: 438
Number of extensions: 5262
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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